Siftome Phase 3L

GSE108022

Gene Expression in Human Rhabdomyosarcoma

Exploratory only Dataset can inform exploration but is not strong enough for primary analysis.
Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset
Source
GEO
Search intent
Patient tissue tumor-vs-normal
Intent behavior
search-intent-behavior-v1
Submission date
2017-12-13
Last update
2019-03-27
Organization
Massachusetts General Hospital
Department
Pathology
Public date
2018-03-06
Experiment types
Expression profiling by high throughput sequencing
Platforms
GPL11154 Illumina HiSeq 2000 (Homo sapiens); GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Series type
Series
SubSeries
Not available
BioProject
Not available
Supplementary files
TXT: GSE108022_counts_matrix.txt.gz; TXT: GSE108022_metadata.txt.gz
Organism
Homo sapiens
Assay
bulk RNA-seq
Samples
106
Study design
Tumor vs unmatched normal
Specimen/source
Tissue
Scoring version
intent-aware-scoring-v15
Ranking batch
b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created
2026-06-05T20:20:27.088676Z
Warning version
intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism
Homo sapiens
Assay
bulk RNA-seq
Specimen/source
patient tissue or biopsy
Controls
matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters
Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules
missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps
non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts
microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs unmatched normal Tissue

Analysis Readiness

Ready after review
94% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

7/10 pts

Metadata quality is usable, but still deserves review.

Blockers

No readiness blockers detected.

Next Steps

  • Review the sample grouping CSV and contrast CSV before running differential expression.
  • Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

No expert-review triggers were detected by Siftome.

Why This Is Ranked Here

Patient tissue tumor-vs-normal
Exploratory only Dataset can inform exploration but is not strong enough for primary analysis.

Score Components

  • relevance 50% Organism normalized. Assay type normalized.
  • comparison suitability 5% Tumor and normal sample groups detected. No excluded sample type flags detected. Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Missing colorectal disease context downgraded for tumor-vs-normal tissue ranking.
  • metadata quality 70% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata was not normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
  • data availability 100% Processed data available. Raw data available.
  • overall 45% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because colorectal/CRC disease context is not explicit.

Derived Classifications

  • Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
  • Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
  • Study design Tumor vs unmatched normal Study design remains rule-derived: Tumor vs unmatched normal.
  • Specimen/source Tissue Specimen/source remains rule-derived: Tissue.
  • Likely case group tumor sample 101 samples
  • Likely control group normal tissue 5 samples

Warnings

  • DISEASE_LABEL_UNCLEAR warning Disease or condition label could not be normalized.
  • TISSUE_TYPE_MISSING warning Tissue or cell type could not be normalized.

Intent Interpretation

  • Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
  • Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
  • Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
  • Specimen assumption patient tissue or biopsy Derived specimen/source is Tissue.
  • Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs unmatched normal; likely groups are tumor sample vs normal tissue.
  • Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
  • Warning rules 2 active warnings missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
  • Downgrade or exclusion reason Downgraded disease context: colorectal/GI relevance is unclear. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

  • Recommendation Exploratory only Dataset can inform exploration but is not strong enough for primary analysis.
  • Supporting fact Tumor vs unmatched normal · Tissue · suitability 5%. Contributed to match or upgrade evidence.
  • Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
  • Supporting fact Downgraded disease context: colorectal/GI relevance is unclear. Contributed to match or upgrade evidence.
  • Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
  • Supporting fact 2 warnings require review. Contributed to match or upgrade evidence.
  • Caution fact Disease or condition label could not be normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Tissue or cell type could not be normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing colorectal disease context downgraded for tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Missing colorectal disease context downgraded for tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Tissue clarity: Tissue metadata was not normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
  • Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
  • Caution fact Overall score capped because colorectal/CRC disease context is not explicit. Contributed to downgrade or manual-review evidence.
  • Caution fact Downgraded disease context: colorectal/GI relevance is unclear. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Downgraded disease context: colorectal/GI relevance is unclear. Contributed to downgrade or manual-review evidence.
  • Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession
GSE108022
Sample records
106 GSM samples
  • GEO has priority for original metadata under the Phase 3J source rules.
  • Processed data: available.
  • Raw data: available.
  • No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession
GSE108022
  • No recount3 project identifier has been imported for this dataset.
  • Once imported, recount3 has priority for processed count availability.
  • The recount3 source filter excludes this dataset until that linkage exists.
No recount3 sync data available.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession
GSE108022
  • No Expression Atlas experiment identifier has been imported for this dataset.
  • Once imported, Expression Atlas has priority for curated expression experiment links.
  • The Expression Atlas source filter excludes this dataset until that linkage exists.
No Expression Atlas sync data available.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession
GSE108022
  • No PubMed identifier is present in the current runtime metadata.
  • No live PubMed search is performed from the dataset detail page.
No publication identifier imported.

Dataset Feedback

0 stored

Original GEO Metadata

dataset_accession: GSE108022
dataset_title: Gene Expression in Human Rhabdomyosarcoma
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2017-12-13
last_update_date: 2019-03-27
organization_name: Massachusetts General Hospital
department: Pathology
public_date: 2018-03-06
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL11154 Illumina HiSeq 2000 (Homo sapiens); GPL16791 Illumina HiSeq 2500 (Homo sapiens)
sub_series: Not available
bioproject: Not available
supplementary_files: TXT: GSE108022_counts_matrix.txt.gz; TXT: GSE108022_metadata.txt.gz
series_type: Series

Why It Matched

  • Tumor vs unmatched normal · Tissue · suitability 5%.
  • Prioritized assay: bulk RNA-seq is the active assay expectation.
  • Downgraded disease context: colorectal/GI relevance is unclear.
  • Processed data is available for downstream review.
  • 2 warnings require review.

Why It May Not Be Suitable

  • Disease or condition label could not be normalized.
  • Tissue or cell type could not be normalized.
  • Missing colorectal disease context downgraded for tumor-vs-normal tissue ranking.
  • Missing or unclear metadata: Missing colorectal disease context downgraded for tumor-vs-normal tissue ranking.
  • Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized.
  • Missing or unclear metadata: Tissue clarity: Tissue metadata was not normalized.
  • Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Overall score capped because colorectal/CRC disease context is not explicit.
  • Downgraded disease context: colorectal/GI relevance is unclear.
  • Missing or unclear metadata: Downgraded disease context: colorectal/GI relevance is unclear.
  • Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

  • warning DISEASE_LABEL_UNCLEAR Disease or condition label could not be normalized.
  • warning TISSUE_TYPE_MISSING Tissue or cell type could not be normalized.

Normalized Fields

108 fields
Field Value Source Origin Confidence Evidence Reason
assay_type bulk RNA-seq dataset GSE108022 Runtime Siftome inference GEO:dataset:GSE108022:53276fc6d7c9c15bd4aee81bb520addf5276c81ac1e93853463023bc5eaa1023 high confidence bulk rna-seq dataset_accession: GSE108022 dataset_title: Gene Expression in Human Rhabdomyosarcoma organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available: true raw_data_ava... keyword match keyword match: bulk rna-seq
organism Homo sapiens dataset GSE108022 Runtime Siftome inference GEO:dataset:GSE108022:53276fc6d7c9c15bd4aee81bb520addf5276c81ac1e93853463023bc5eaa1023 high confidence homo sapiens dataset_accession: GSE108022 dataset_title: Gene Expression in Human Rhabdomyosarcoma organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available: true raw_data_ava... keyword match keyword match: homo sapiens
sample_type tumor sample sample GSM2887377 Runtime Siftome inference GEO:sample:GSM2887377:b737136657f0c7428a1a6aa86f6a746867080cf07ece891a2f4ff33ee81f5160 low confidence tumor sample_accession: GSM2887377 sample_title: RMS007 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS007 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887378 Runtime Siftome inference GEO:sample:GSM2887378:e31f819fa3ebe89788724030d855243f3ef0ea016fb0c421b882b42e7ff6bca4 low confidence tumor sample_accession: GSM2887378 sample_title: RMS008 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS008 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887379 Runtime Siftome inference GEO:sample:GSM2887379:731f310b02cc1e36c4376241baf2a777bffa8fb83dd719998e20f4a66533338d low confidence tumor sample_accession: GSM2887379 sample_title: RMS049 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS049 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887380 Runtime Siftome inference GEO:sample:GSM2887380:8136eb72393fe310b036bf79720ba35ac58ca54d9283dd04405e3f3612bd50fb low confidence tumor sample_accession: GSM2887380 sample_title: RMS051 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS051 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887381 Runtime Siftome inference GEO:sample:GSM2887381:bf7ecd16d77c378a4cebd822486b9b128132e3fc115ef73df291cbf3399f912a low confidence tumor sample_accession: GSM2887381 sample_title: RMS055 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS055 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887382 Runtime Siftome inference GEO:sample:GSM2887382:960562fce333f91804cb88103dac185a8cc09bd0adbc3246a4fda465895eae96 low confidence tumor sample_accession: GSM2887382 sample_title: RMS057 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS057 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887383 Runtime Siftome inference GEO:sample:GSM2887383:b6369fa10fcc12fc7c04670cd9041162c1206fb1b5932b474c3914ce3e65e0f4 low confidence tumor sample_accession: GSM2887383 sample_title: RMS061 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS061 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887384 Runtime Siftome inference GEO:sample:GSM2887384:107e19ef72b806b8862e7a574233944c9eb31e7900a3ffaa0b87f26bd8d5c3d8 low confidence tumor sample_accession: GSM2887384 sample_title: RMS2015 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2015 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887385 Runtime Siftome inference GEO:sample:GSM2887385:e06082be8425667ac9fe82e20eeb106ed7a54c1074e82a0271c6b6ab39c8cdf6 low confidence tumor sample_accession: GSM2887385 sample_title: RMS202 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS202 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887386 Runtime Siftome inference GEO:sample:GSM2887386:c6f103c43b601d4c81ae8d5b607ab9060a8aa1f5eccb68f0a3d5916ca056f29d low confidence tumor sample_accession: GSM2887386 sample_title: RMS202.1 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS202.1 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887387 Runtime Siftome inference GEO:sample:GSM2887387:089b5ce6880b75c799321317930776a181ccc44bf3238f4706b2c291e6414731 low confidence tumor sample_accession: GSM2887387 sample_title: RMS2021 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2021 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887388 Runtime Siftome inference GEO:sample:GSM2887388:bcce8476dde309141a46ce37c730052020ac4fbb03203bf8fdd96c351b09e71f low confidence tumor sample_accession: GSM2887388 sample_title: RMS2022 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2022 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887389 Runtime Siftome inference GEO:sample:GSM2887389:3834aa6656b14df42e42f9ce50aa5ff8a6f86235cf54f47850d6e6440bb3ee7f low confidence tumor sample_accession: GSM2887389 sample_title: RMS2024 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2024 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887390 Runtime Siftome inference GEO:sample:GSM2887390:5da057c72b344f0181399b219aaa97fa33317e12e390e335ee3a60525342bf27 low confidence tumor sample_accession: GSM2887390 sample_title: RMS2026 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2026 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887391 Runtime Siftome inference GEO:sample:GSM2887391:db1ddbcda8fbfd7ca32e1e40cd6f5668ccc2255ca067aaa5451174ffaefe2539 low confidence tumor sample_accession: GSM2887391 sample_title: RMS2028 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2028 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887392 Runtime Siftome inference GEO:sample:GSM2887392:387224e39274b7f8f9f6f9619fecfa8d9cdf4078f014b97a11c6f7ba9a16e95d low confidence tumor sample_accession: GSM2887392 sample_title: RMS2029 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2029 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887393 Runtime Siftome inference GEO:sample:GSM2887393:652f560491c202ab3d1228efc9e830e91c82325bdf0bfaaf6d1f15f65ae65c6f low confidence tumor sample_accession: GSM2887393 sample_title: RMS2030 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2030 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887394 Runtime Siftome inference GEO:sample:GSM2887394:ebe1627d847183716e84022bcdc0ddf4c2f5ae53a116e37acdbbce7e77157852 low confidence tumor sample_accession: GSM2887394 sample_title: RMS2031 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2031 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887395 Runtime Siftome inference GEO:sample:GSM2887395:78532cd09eb3cae7bf8b00faec552081de8fc92e0ef0ad52e77582aa650e399d low confidence tumor sample_accession: GSM2887395 sample_title: RMS2032 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2032 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887396 Runtime Siftome inference GEO:sample:GSM2887396:d6387e4ca40dcc351bba2ccae8917d0f49b183a3a88bb1be3f069a663d76cf19 low confidence tumor sample_accession: GSM2887396 sample_title: RMS2033 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2033 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887397 Runtime Siftome inference GEO:sample:GSM2887397:41bb86a36309b10207aed077d497f8b8a9420f8b34aea05f04ee76f890072838 low confidence tumor sample_accession: GSM2887397 sample_title: RMS2034 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2034 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887398 Runtime Siftome inference GEO:sample:GSM2887398:961f4bb572adc5b384172f067f1dd0ab06297d174bef5f35489e2e8630c260aa low confidence tumor sample_accession: GSM2887398 sample_title: RMS2037 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2037 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887399 Runtime Siftome inference GEO:sample:GSM2887399:ef085ba59d2aade879735cba0dfa99a65817ba7b163ed8be6fa885a59061f7d0 low confidence tumor sample_accession: GSM2887399 sample_title: RMS2038 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2038 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887400 Runtime Siftome inference GEO:sample:GSM2887400:51c1ccec2919dd67bb38db579a01ce65574402a93b695cc8e73a03b90119cad6 low confidence tumor sample_accession: GSM2887400 sample_title: RMS2039 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2039 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887401 Runtime Siftome inference GEO:sample:GSM2887401:0483431cb9c4f546b97b79cbb259c229af5f58e8d5e909ea257ab556bd8e278a low confidence tumor sample_accession: GSM2887401 sample_title: RMS2040 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2040 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887402 Runtime Siftome inference GEO:sample:GSM2887402:480c299b92148f6128147ee6b9937628b97a2c3905c03a3c37f2f61ef0390cb8 low confidence tumor sample_accession: GSM2887402 sample_title: RMS2041 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2041 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887403 Runtime Siftome inference GEO:sample:GSM2887403:56c3d52393c3649633dcd11e092722508ea919e2050fd38adb04748d4afdf70d low confidence tumor sample_accession: GSM2887403 sample_title: RMS2046 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2046 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887404 Runtime Siftome inference GEO:sample:GSM2887404:c6b1dc77e28f3a6dec41fb7839dc9f6271fa552059d0773f660ad245572494ea low confidence tumor sample_accession: GSM2887404 sample_title: RMS2047 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2047 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887405 Runtime Siftome inference GEO:sample:GSM2887405:cbf022b5b579ee1712fd9275e1707171376f86e3d661cf77e5ba51db8df1ac6f low confidence tumor sample_accession: GSM2887405 sample_title: RMS2049 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2049 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887406 Runtime Siftome inference GEO:sample:GSM2887406:969d4850bc01b0b2928db47842838f9bac672c13da361562d8e7ea4f8f99954a low confidence tumor sample_accession: GSM2887406 sample_title: RMS205 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS205 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887407 Runtime Siftome inference GEO:sample:GSM2887407:3a1ae44b3949347d40bb5b429793cbe437275af0741306efcad2aabd1206926a low confidence tumor sample_accession: GSM2887407 sample_title: RMS205.1 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS205.1 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887408 Runtime Siftome inference GEO:sample:GSM2887408:48e39ae745a8b8e935bcfc73025b2fe02467f67ad0a1485d788839689e26dbc7 low confidence tumor sample_accession: GSM2887408 sample_title: RMS2051 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2051 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887409 Runtime Siftome inference GEO:sample:GSM2887409:417d93b9fd84cba085fc33484e287e86a063c33b604dc95d435cada8cfed94be low confidence tumor sample_accession: GSM2887409 sample_title: RMS2052 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2052 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887410 Runtime Siftome inference GEO:sample:GSM2887410:2d6f872f03fbc135ef6c43eb34e1800514e80269fd86163ad730c1fb09fc8665 low confidence tumor sample_accession: GSM2887410 sample_title: RMS2053 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2053 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887411 Runtime Siftome inference GEO:sample:GSM2887411:85499044de242aa691616f5cf3bffdaf49790f8d6a04105be77bbc35dd7a82d8 low confidence tumor sample_accession: GSM2887411 sample_title: RMS2054 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2054 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887412 Runtime Siftome inference GEO:sample:GSM2887412:f5a271c91e3ff7db149b9e5059e330a61ea434b46947d19bb4f9fc2dddae3f65 low confidence tumor sample_accession: GSM2887412 sample_title: RMS2056 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2056 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887413 Runtime Siftome inference GEO:sample:GSM2887413:7ed52df0b259e14d35c37428f3a88e7b82fdba34e14641c236aec7f9e93b0104 low confidence tumor sample_accession: GSM2887413 sample_title: RMS2058 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2058 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887414 Runtime Siftome inference GEO:sample:GSM2887414:976fd67b8522807528f2d130f1ab096c1afe34d9a0f4982f90c4a273110b476e low confidence tumor sample_accession: GSM2887414 sample_title: RMS2059 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2059 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887415 Runtime Siftome inference GEO:sample:GSM2887415:c79a9dc6eaaac696376e5c2bef856b74e983d17d57095f3d448e8d0196ac8c51 low confidence tumor sample_accession: GSM2887415 sample_title: RMS206 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS206 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887416 Runtime Siftome inference GEO:sample:GSM2887416:1df786be73e260187a88d81bac14200aa22ba9743b0c26163624a979e1b80f88 low confidence tumor sample_accession: GSM2887416 sample_title: RMS206.1 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS206.1 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887417 Runtime Siftome inference GEO:sample:GSM2887417:eadd2bf84b585c65e156868a973c2cdf089da5a7444f3277251af94a4eab69ef low confidence tumor sample_accession: GSM2887417 sample_title: RMS2060 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2060 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887418 Runtime Siftome inference GEO:sample:GSM2887418:0eb8f9e74c76de1914d48bb79f0080badac0504cc05dd0075d8dc9c0246d3f9f low confidence tumor sample_accession: GSM2887418 sample_title: RMS2061 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2061 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887419 Runtime Siftome inference GEO:sample:GSM2887419:02ee52b1afa4caee45d617430c8306922c16e77ec93a129c5d111f5e042530d8 low confidence tumor sample_accession: GSM2887419 sample_title: RMS2063 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2063 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887420 Runtime Siftome inference GEO:sample:GSM2887420:0c14e05cb58b6472146ccc4e08d21b91e0f70d8b1b4f039b74432ade08c874ba low confidence tumor sample_accession: GSM2887420 sample_title: RMS2065 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2065 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887421 Runtime Siftome inference GEO:sample:GSM2887421:d163e73f7dd0fda3670455fbf52a721ae2119732e5d57f087e5802048b4fc950 low confidence tumor sample_accession: GSM2887421 sample_title: RMS2071 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2071 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887422 Runtime Siftome inference GEO:sample:GSM2887422:79f5d1bc781973e36d03c65c817ec2c4796b97990f0ed348845de60dd835a0ef low confidence tumor sample_accession: GSM2887422 sample_title: RMS2072 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2072 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887423 Runtime Siftome inference GEO:sample:GSM2887423:2641291b7fe8340cda2d66e244ad5d2d9f16beec05b7037f98bb4fecefe5c784 low confidence tumor sample_accession: GSM2887423 sample_title: RMS2074 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2074 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887424 Runtime Siftome inference GEO:sample:GSM2887424:d5be4c50fcc24e69ad65bf2ce9f0e80f6c0e81bb6f6df62d2fe74c3b99bcb7f5 low confidence tumor sample_accession: GSM2887424 sample_title: RMS2075 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2075 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887425 Runtime Siftome inference GEO:sample:GSM2887425:d53a19836eb53e7e336cb5bf01bbff3ca27cc098a9327ec31abdf91534be9e81 low confidence tumor sample_accession: GSM2887425 sample_title: RMS2076 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2076 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887426 Runtime Siftome inference GEO:sample:GSM2887426:39c597cd43010fe11f952a229cfa16815ccb64bf39f006bbd8a380ab582be004 low confidence tumor sample_accession: GSM2887426 sample_title: RMS2078 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2078 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887427 Runtime Siftome inference GEO:sample:GSM2887427:3bc72d30f5aeb6d7bf9a20c7c5eae162fcf1f571eee44eb618d0490c7bc772b2 low confidence tumor sample_accession: GSM2887427 sample_title: RMS2079 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2079 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887428 Runtime Siftome inference GEO:sample:GSM2887428:e9d1486095e25d926c1ac13953d68447b8b61ea3fd7c8b4fa49add46e946923c low confidence tumor sample_accession: GSM2887428 sample_title: RMS208 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS208 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887429 Runtime Siftome inference GEO:sample:GSM2887429:9b94b3759ab7989959f12b7cdcc8861a1a6097aa52b398036e21e8c4df709bfe low confidence tumor sample_accession: GSM2887429 sample_title: RMS2080 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2080 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887430 Runtime Siftome inference GEO:sample:GSM2887430:726cd66631c7cdc8fbfb20ea4a435b1cd4ff1cb18b30007f2464eb2651fdfb26 low confidence tumor sample_accession: GSM2887430 sample_title: RMS2081 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2081 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887431 Runtime Siftome inference GEO:sample:GSM2887431:e3ba3011154bf55fc8d4a564b65816b49a89513dcc48a3a0399943f857a23045 low confidence tumor sample_accession: GSM2887431 sample_title: RMS2083 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2083 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887432 Runtime Siftome inference GEO:sample:GSM2887432:0f92c65e1a128eebd2be3d681e1d11f4ae6b68af243f863ca534204352836b9a low confidence tumor sample_accession: GSM2887432 sample_title: RMS2084 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2084 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887433 Runtime Siftome inference GEO:sample:GSM2887433:d8b55358f43677f719ab0964fb60c0dcdbf87818a26d921b005b0eb45a57adc8 low confidence tumor sample_accession: GSM2887433 sample_title: RMS2085 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2085 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887434 Runtime Siftome inference GEO:sample:GSM2887434:66fdc6b4e924585aa523bb8919aa3d38bd84cbb2d5ed0bd679176d9da8c54149 low confidence tumor sample_accession: GSM2887434 sample_title: RMS209 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS209 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887435 Runtime Siftome inference GEO:sample:GSM2887435:2eb30a831b34f5b0818b8953616304421c6e35f6f5d86a214611df19a55875ae low confidence tumor sample_accession: GSM2887435 sample_title: RMS209.1 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS209.1 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887436 Runtime Siftome inference GEO:sample:GSM2887436:ac9e832b715fb6ab779cfcb8df545a49fad316268a5bc040610bab6e0108b6c6 low confidence tumor sample_accession: GSM2887436 sample_title: RMS2090 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2090 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887437 Runtime Siftome inference GEO:sample:GSM2887437:16cf793247f8da5fe572b7eb5bb280ad3bf68608555a6dfee429bd8884860c65 low confidence tumor sample_accession: GSM2887437 sample_title: RMS2093 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2093 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887438 Runtime Siftome inference GEO:sample:GSM2887438:90333dee2501d6da0504bffa4e654715fd8004150f6307ea5c77338b50bb02e9 low confidence tumor sample_accession: GSM2887438 sample_title: RMS2094 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2094 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887439 Runtime Siftome inference GEO:sample:GSM2887439:e93069b354651c432adf9b053c34c76fcb6249a1fe7d6057d30c3d4c49ec3bb4 low confidence tumor sample_accession: GSM2887439 sample_title: RMS2096 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2096 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887440 Runtime Siftome inference GEO:sample:GSM2887440:d239ebc21edb21bdb41d055ec55efc22ecf2cf470ea3a8da7a3897e7d204f049 low confidence tumor sample_accession: GSM2887440 sample_title: RMS210 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS210 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887441 Runtime Siftome inference GEO:sample:GSM2887441:cd33f45de20f27eb7d34aca1d6818c3345fb59ae527fad42f4f8989a28fbfda5 low confidence tumor sample_accession: GSM2887441 sample_title: RMS2103 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2103 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887442 Runtime Siftome inference GEO:sample:GSM2887442:3bcf5c71db5df9c9403cbe7c2a777397492765bd52eb5abddbd92c275a1863b9 low confidence tumor sample_accession: GSM2887442 sample_title: RMS2104 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2104 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887443 Runtime Siftome inference GEO:sample:GSM2887443:8478456e33d3733e7dc0d2e0d07659469d6b2bd8d2bf5d15ceb028b214d2c7fb low confidence tumor sample_accession: GSM2887443 sample_title: RMS2105 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2105 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887444 Runtime Siftome inference GEO:sample:GSM2887444:5345f52c2bc024097ca2a50b7f3442790cada2649683e8e4fb362bee2ca1c2c2 low confidence tumor sample_accession: GSM2887444 sample_title: RMS2107 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2107 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887445 Runtime Siftome inference GEO:sample:GSM2887445:967285460781854b82b24178598f22ec4024105feecdf3f39f5c576526037457 low confidence tumor sample_accession: GSM2887445 sample_title: RMS211 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS211 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887446 Runtime Siftome inference GEO:sample:GSM2887446:ea7f29aa3689af4b151b38c822b3962c3816653f4eaace7535bed71473a4416d low confidence tumor sample_accession: GSM2887446 sample_title: RMS2110 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2110 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887447 Runtime Siftome inference GEO:sample:GSM2887447:24a6bd5a7bb622499ecf0395c33d501f48ec7b7cad3a631b96c3316860b4e401 low confidence tumor sample_accession: GSM2887447 sample_title: RMS2111 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2111 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887448 Runtime Siftome inference GEO:sample:GSM2887448:4ec706360dde020a2f722b77a32daae2054ccda6111a80045a93331d13669f2a low confidence tumor sample_accession: GSM2887448 sample_title: RMS2114 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2114 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887449 Runtime Siftome inference GEO:sample:GSM2887449:4efa0648db663ad37e3e4cc661f679dacaa6c92f80823db0c026da0bc2d49c90 low confidence tumor sample_accession: GSM2887449 sample_title: RMS2117 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2117 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887450 Runtime Siftome inference GEO:sample:GSM2887450:8af58d6657860f6f2daae7f0f07c76b5af41a9cc567d39473de1e819672f17b3 low confidence tumor sample_accession: GSM2887450 sample_title: RMS2119 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS2119 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887451 Runtime Siftome inference GEO:sample:GSM2887451:dd96012da51c3c863f30558c2154370eba59467ee2fbfdf50432ec4096f05992 low confidence tumor sample_accession: GSM2887451 sample_title: RMS212 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS212 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887452 Runtime Siftome inference GEO:sample:GSM2887452:c348f8752b879e9cdd543815353f498d99f96cd95f05228882aa4576ee02a283 low confidence tumor sample_accession: GSM2887452 sample_title: RMS214 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS214 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887453 Runtime Siftome inference GEO:sample:GSM2887453:bd404967a18f6c813bf88f68ab73446f9ea8a6696b031a12242364006ef36cc1 low confidence tumor sample_accession: GSM2887453 sample_title: RMS216 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS216 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887454 Runtime Siftome inference GEO:sample:GSM2887454:d20948a84d0de786c77d9e941a4bd9a1fa64d456ee5342be263e3465a7c035c8 low confidence tumor sample_accession: GSM2887454 sample_title: RMS217 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS217 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887455 Runtime Siftome inference GEO:sample:GSM2887455:6f92db61be8d53f66f3b93b24c97b4a4a5eac882e14a49359d062b944ccbfb84 low confidence tumor sample_accession: GSM2887455 sample_title: RMS222 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS222 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887456 Runtime Siftome inference GEO:sample:GSM2887456:ef09c258c61c20a3d3c73cc2011a9ba5e862128e9042ba9158bc123d8e3c8d4d low confidence tumor sample_accession: GSM2887456 sample_title: RMS222.1 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS222.1 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887457 Runtime Siftome inference GEO:sample:GSM2887457:5d313ef2b8f861ecabf77a13747ae122175c9956d6ef2b81b1ad5837e2c71f32 low confidence tumor sample_accession: GSM2887457 sample_title: RMS223 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS223 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887458 Runtime Siftome inference GEO:sample:GSM2887458:c4e4b2e169f8ab033f875d46208cc490c816bd291f641dafd3f7a9d088dbbb89 low confidence tumor sample_accession: GSM2887458 sample_title: RMS224 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS224 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887459 Runtime Siftome inference GEO:sample:GSM2887459:c9395d456b55c172e5149ff525dbd47ab76a9afb25fd41f3a97dfce025063655 low confidence tumor sample_accession: GSM2887459 sample_title: RMS225 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS225 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887460 Runtime Siftome inference GEO:sample:GSM2887460:59467bf941f3278de628c033d3f635ee61946009d9841e84d806bfcc69137912 low confidence tumor sample_accession: GSM2887460 sample_title: RMS226 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS226 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887461 Runtime Siftome inference GEO:sample:GSM2887461:c3cd06a090fa1a2a497ef4ae79fd186cc3f2b5cffb587d5afa11d5f0c61e2679 low confidence tumor sample_accession: GSM2887461 sample_title: RMS227 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS227 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887462 Runtime Siftome inference GEO:sample:GSM2887462:b36c560ea4b4b20856b23d85353b20f1bfa8fe9a166b419738a989b871f6dd23 low confidence tumor sample_accession: GSM2887462 sample_title: RMS228 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS228 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887463 Runtime Siftome inference GEO:sample:GSM2887463:eb437784d14166b05b43ecbad94bbeeeda2ef9961abe1a14b1a46810263d8b1c low confidence tumor sample_accession: GSM2887463 sample_title: RMS230 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS230 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887464 Runtime Siftome inference GEO:sample:GSM2887464:595e1533b434d9e2854cf01cf906103975a164b72c7dd82183efca392ea7d5bf low confidence tumor sample_accession: GSM2887464 sample_title: RMS231 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS231 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887465 Runtime Siftome inference GEO:sample:GSM2887465:0f1ce33d97286ddbd595f7439be0bb53440c01710e50dc2b7f6f084caa617be5 low confidence tumor sample_accession: GSM2887465 sample_title: RMS232 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS232 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887466 Runtime Siftome inference GEO:sample:GSM2887466:5eb3e5a51b457ddd4f70d3f46f806ec1d35372bcf2dc6b403cd1d2dfe854240f low confidence tumor sample_accession: GSM2887466 sample_title: RMS235 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS235 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887467 Runtime Siftome inference GEO:sample:GSM2887467:86bb9df075c7bd8e37e80584b0f78d22ad2e291dfd207130150308e97485d1e0 low confidence tumor sample_accession: GSM2887467 sample_title: RMS238 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS238 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887468 Runtime Siftome inference GEO:sample:GSM2887468:bab63f7d1e02fbc7194929d08e27ff6f4afa7fb4b927ba9ed397e5eb4942185c low confidence tumor sample_accession: GSM2887468 sample_title: RMS239 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS239 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887469 Runtime Siftome inference GEO:sample:GSM2887469:936b0e615f8598889941dffb9500b58859a75f2a89a52a62446c652117555274 low confidence tumor sample_accession: GSM2887469 sample_title: RMS240 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS240 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887470 Runtime Siftome inference GEO:sample:GSM2887470:b39a276be9d78691f5c35395904894540a97f59f45edc0b8aa0b5ecb64a91c67 low confidence tumor sample_accession: GSM2887470 sample_title: RMS242 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS242 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887471 Runtime Siftome inference GEO:sample:GSM2887471:d0d9c1c61a76a273c16e7c4decc630f3b81e51ba48eb42376bb71eaa635cb45e low confidence tumor sample_accession: GSM2887471 sample_title: RMS244 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS244 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887472 Runtime Siftome inference GEO:sample:GSM2887472:be7a5b9e91c16fcbcf85868da72f93f8af6040f8921c8093ef859932401b1b80 low confidence tumor sample_accession: GSM2887472 sample_title: RMS246 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS246 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887473 Runtime Siftome inference GEO:sample:GSM2887473:9c87e31655359ee631f06531c09e30c448e52712be2c02cfbd7e5fd98a67a36e low confidence tumor sample_accession: GSM2887473 sample_title: RMS247 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS247 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887474 Runtime Siftome inference GEO:sample:GSM2887474:af4e5432c1700eb0e211b89e34d69f2cea4e3e8ef248472f322d39cdd19ca504 low confidence tumor sample_accession: GSM2887474 sample_title: RMS248 source_name: rhabdomyosarcoma characteristics: tissue: tumor RMS248 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887475 Runtime Siftome inference GEO:sample:GSM2887475:fc2e4bad00adb71fa498e9cba9024560f5c3dd2f5253a2cc81eeac503fa6a58b low confidence tumor sample_accession: GSM2887475 sample_title: NCI0003 source_name: rhabdomyosarcoma characteristics: tissue: tumor NCI0003 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887476 Runtime Siftome inference GEO:sample:GSM2887476:4b2c66f081c499d868896df27cc8e7cf2b7fde000e1302c4611b5b81a79d8776 low confidence tumor sample_accession: GSM2887476 sample_title: NCI0075 source_name: rhabdomyosarcoma characteristics: tissue: tumor NCI0075 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM2887477 Runtime Siftome inference GEO:sample:GSM2887477:a2714b7f46d4c7d63025b5f7e0dee4e97aa0940930a8214eb59d86ed873076e5 low confidence tumor sample_accession: GSM2887477 sample_title: NCI0082 source_name: rhabdomyosarcoma characteristics: tissue: tumor NCI0082 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM2887478 Runtime Siftome inference GEO:sample:GSM2887478:11b6626106e6fbdf4dbe1bdfdc228f859e3a299cd0b3be17b00ae5fd0be02470 low confidence normal sample_accession: GSM2887478 sample_title: NS127muscle source_name: muscle characteristics: tissue: Normal NS127muscle controlled vocabulary controlled vocabulary sample type match: normal
sample_type normal tissue sample GSM2887479 Runtime Siftome inference GEO:sample:GSM2887479:6b76cc163cf114a3f1c8db3388deebf77d057172fb66186a41608600e504a11c low confidence normal sample_accession: GSM2887479 sample_title: NS128muscle source_name: muscle characteristics: tissue: Normal NS128muscle controlled vocabulary controlled vocabulary sample type match: normal
sample_type normal tissue sample GSM2887480 Runtime Siftome inference GEO:sample:GSM2887480:5796344c1212a0166db131467be1599e5f6fbc08d72e48b0b630c492d0b6d781 low confidence normal sample_accession: GSM2887480 sample_title: NS129muscle source_name: muscle characteristics: tissue: Normal NS129muscle controlled vocabulary controlled vocabulary sample type match: normal
sample_type normal tissue sample GSM2887481 Runtime Siftome inference GEO:sample:GSM2887481:4995dfc60f0b1e5698a0cd742a047a61caea9c78e6b093ff7c7c739bfc23a4c6 low confidence normal sample_accession: GSM2887481 sample_title: NS132muscle source_name: muscle characteristics: tissue: Normal NS132muscle controlled vocabulary controlled vocabulary sample type match: normal
sample_type normal tissue sample GSM2887482 Runtime Siftome inference GEO:sample:GSM2887482:842810d64508cb86c4a18f8651126dada2740692949ee06a6a3f1fdab2b8086f low confidence normal sample_accession: GSM2887482 sample_title: NS134muscle source_name: muscle characteristics: tissue: Normal NS134muscle controlled vocabulary controlled vocabulary sample type match: normal

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

101
  • GSM2887377 RMS007 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887378 RMS008 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887379 RMS049 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887380 RMS051 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887381 RMS055 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887382 RMS057 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887383 RMS061 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887384 RMS2015 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887385 RMS202 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887386 RMS202.1 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887387 RMS2021 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887388 RMS2022 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887389 RMS2024 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887390 RMS2026 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887391 RMS2028 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887392 RMS2029 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887393 RMS2030 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887394 RMS2031 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887395 RMS2032 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887396 RMS2033 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887397 RMS2034 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887398 RMS2037 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887399 RMS2038 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887400 RMS2039 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887401 RMS2040 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887402 RMS2041 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887403 RMS2046 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887404 RMS2047 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887405 RMS2049 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887406 RMS205 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887407 RMS205.1 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887408 RMS2051 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887409 RMS2052 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887410 RMS2053 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887411 RMS2054 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887412 RMS2056 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887413 RMS2058 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887414 RMS2059 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887415 RMS206 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887416 RMS206.1 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887417 RMS2060 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887418 RMS2061 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887419 RMS2063 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887420 RMS2065 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887421 RMS2071 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887422 RMS2072 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887423 RMS2074 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887424 RMS2075 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887425 RMS2076 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor
  • GSM2887426 RMS2078 tumor sample Case marker detected. rhabdomyosarcoma tissue: tumor

51 more samples are hidden from this preview.

Possible control samples

Samples currently treated as controls or baseline.

5
  • GSM2887478 NS127muscle normal tissue Control marker detected. muscle tissue: Normal
  • GSM2887479 NS128muscle normal tissue Control marker detected. muscle tissue: Normal
  • GSM2887480 NS129muscle normal tissue Control marker detected. muscle tissue: Normal
  • GSM2887481 NS132muscle normal tissue Control marker detected. muscle tissue: Normal
  • GSM2887482 NS134muscle normal tissue Control marker detected. muscle tissue: Normal

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

70 pts
Clarity
70%
Weight
100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata was not normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

tumor sample

showing 100 of 101 samples

1 more samples are available through the export files.

normal tissue

5 samples

Score Breakdown

50%

relevance

  • Organism normalized.
  • Assay type normalized.
5%

comparison suitability

  • Tumor and normal sample groups detected.
  • No excluded sample type flags detected.
  • Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
  • Patient tissue or biopsy specimens boosted for tissue comparison triage.
  • Missing colorectal disease context downgraded for tumor-vs-normal tissue ranking.
70%

metadata quality

  • Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
  • Group clarity: Rule-based grouping found both case and control samples.
  • Disease clarity: Disease or condition metadata was not normalized.
  • Tissue clarity: Tissue metadata was not normalized.
  • Treatment clarity: No unclear treatment split detected in the sample metadata.
  • Replicate clarity: No pooled sample or technical replicate flags detected.
  • Data availability clarity: Dataset-level processed or raw data availability is explicit.
100%

data availability

  • Processed data available.
  • Raw data available.
45%

overall

  • Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Overall score capped because colorectal/CRC disease context is not explicit.

Sample Links

106 samples

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.