Siftome Phase 3L

GSE113113

Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted immune checkpoint profile

Not suitable Dataset does not meet the current suitability threshold.

Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset

Source: GEO
Search intent: Patient tissue tumor-vs-normal
Intent behavior: search-intent-behavior-v1
Submission date: 2018-04-13
Last update: 2021-12-07
Organization: City of Hope National Medical Center
Department: Computational and Quantitative Medicine
Public date: 2018-08-21
Experiment types: Expression profiling by high throughput sequencing
Platforms: GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Series type: Series
SubSeries: Not available
BioProject: PRJNA450035
Supplementary files: TXT: GSE113113_data_final.txt.gz
Organism: Homo sapiens
Assay: bulk RNA-seq
Samples: 52
Study design: Tumor vs unmatched normal
Specimen/source: Biopsy
Scoring version: intent-aware-scoring-v15
Ranking batch: b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created: 2026-06-05T20:20:27.088676Z
Warning version: intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism: Homo sapiens
Assay: bulk RNA-seq
Specimen/source: patient tissue or biopsy
Controls: matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters: Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules: missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps: non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts: microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs unmatched normal Biopsy

Tumor samples and normal/healthy controls detected.
Biopsy source terms detected.
Case metadata contains tumor or disease terms.
Control metadata contains normal or healthy-control terms.

Analysis Readiness

Ready after review

97% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

Review the sample grouping CSV and contrast CSV before running differential expression.
Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

No expert-review triggers were detected by Siftome.

Why This Is Ranked Here

Patient tissue tumor-vs-normal

Not suitable Dataset does not meet the current suitability threshold.

Score Components

relevance 60% Organism normalized. Assay type normalized. Tissue metadata normalized.
comparison suitability 0% Tumor and normal sample groups detected. No excluded sample type flags detected. Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
metadata quality 85% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
data availability 100% Processed data available. Raw data available.
overall 34% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Derived Classifications

Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
Study design Tumor vs unmatched normal Study design remains rule-derived: Tumor vs unmatched normal.
Specimen/source Biopsy Specimen/source remains rule-derived: Biopsy.
Likely case group tumor sample 49 samples
Likely control group normal tissue 3 samples

Warnings

DISEASE_LABEL_UNCLEAR warning Disease or condition label could not be normalized.

Intent Interpretation

Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
Specimen assumption patient tissue or biopsy Derived specimen/source is Biopsy.
Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs unmatched normal; likely groups are tumor sample vs normal tissue.
Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Warning rules 1 active warning missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Downgrade or exclusion reason Downgraded disease context: not a colorectal/GI cancer cohort. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

Recommendation Not suitable Dataset does not meet the current suitability threshold.
Supporting fact Tumor vs unmatched normal · Biopsy · suitability 0%. Contributed to match or upgrade evidence.
Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
Supporting fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to match or upgrade evidence.
Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
Supporting fact 1 warning require review. Contributed to match or upgrade evidence.
Caution fact Disease or condition label could not be normalized. Contributed to downgrade or manual-review evidence.
Caution fact Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
Caution fact Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized. Contributed to downgrade or manual-review evidence.
Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because tumor/normal grouping is from a non-colorectal cancer context. Contributed to downgrade or manual-review evidence.
Caution fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to downgrade or manual-review evidence.
Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

No active manual corrections are applied to this dataset.

Organism · Normalization rules Organism remains rule-derived: Homo sapiens.
Assay · Normalization rules Assay remains rule-derived: bulk RNA-seq.
Study design · Classifier and grouping rules Study design remains rule-derived: Tumor vs unmatched normal.
Specimen/source · Normalization rules Specimen/source remains rule-derived: Biopsy.

Dataset organism

Dataset field · Organism · Global correction

Wrong organism

Current derived value

Homo sapiens

Raw GEO organism

dataset_accession: GSE113113
organism: Homo sapiens
dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted  immune checkpoint profile

Dataset assay

Dataset field · Assay · Global correction

Wrong assay

Current derived value

bulk RNA-seq

Raw GEO assay metadata

assay_type: bulk RNA-seq
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL16791 Illumina HiSeq 2500 (Homo sapiens)
dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted  immune checkpoint profile

Study design

Dataset field · Study design · Global correction

Wrong study design

Current derived value

Tumor vs unmatched normal

Raw GEO study and sample metadata

dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted  immune checkpoint profile
experiment_types: Expression profiling by high throughput sequencing
sample_context: GSM3097075: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097076: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097077: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097078: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097079: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous
[Correction source preview truncated.]

Specimen/source type

Dataset field · Specimen/source · Global correction

Wrong specimen/source

Current derived value

Biopsy

Raw GEO sample source metadata

dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted  immune checkpoint profile
sample_context: GSM3097075: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097076: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097077: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097078: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097079: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097080: source_na
[Correction source preview truncated.]

Disease context

Dataset field · Disease context · Global correction

Wrong disease context

Current derived value

No disease context detected

Raw GEO disease context metadata

dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted  immune checkpoint profile
sample_context: GSM3097075: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097076: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097077: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097078: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097079: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097080: source_na
[Correction source preview truncated.]

Intent exclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Exclude from intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE113113
dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted  immune checkpoint profile
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM3097075: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097076: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097077: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097078: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097079: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: C
[Correction source preview truncated.]

Intent-only inclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Include only for intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE113113
dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted  immune checkpoint profile
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM3097075: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097076: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097077: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097078: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097079: source_name=Skin Biopsy of tumor/Plaque/Patch; characteristics=disease state: C
[Correction source preview truncated.]

GSM3097075 grouping

Sample field · Grouping · Global correction · GSM3097075

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097075
sample_title: S15.8147.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097075 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097075

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097075
sample_title: S15.8147.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097076 grouping

Sample field · Grouping · Global correction · GSM3097076

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097076
sample_title: S15.10848.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097076 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097076

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097076
sample_title: S15.10848.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097077 grouping

Sample field · Grouping · Global correction · GSM3097077

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097077
sample_title: S15.6955.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097077 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097077

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097077
sample_title: S15.6955.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097078 grouping

Sample field · Grouping · Global correction · GSM3097078

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097078
sample_title: S15.7535.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097078 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097078

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097078
sample_title: S15.7535.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097079 grouping

Sample field · Grouping · Global correction · GSM3097079

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097079
sample_title: S15.6746.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097079 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097079

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097079
sample_title: S15.6746.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097080 grouping

Sample field · Grouping · Global correction · GSM3097080

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097080
sample_title: S15.5509.
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097080 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097080

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097080
sample_title: S15.5509.
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097081 grouping

Sample field · Grouping · Global correction · GSM3097081

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097081
sample_title: S15.5295.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097081 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097081

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097081
sample_title: S15.5295.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097082 grouping

Sample field · Grouping · Global correction · GSM3097082

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097082
sample_title: S15.5295.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097082 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097082

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097082
sample_title: S15.5295.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097083 grouping

Sample field · Grouping · Global correction · GSM3097083

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097083
sample_title: S15.5506.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097083 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097083

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097083
sample_title: S15.5506.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097084 grouping

Sample field · Grouping · Global correction · GSM3097084

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097084
sample_title: S15.11632.B2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097084 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097084

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097084
sample_title: S15.11632.B2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097085 grouping

Sample field · Grouping · Global correction · GSM3097085

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097085
sample_title: S15.6993.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097085 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097085

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097085
sample_title: S15.6993.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097086 grouping

Sample field · Grouping · Global correction · GSM3097086

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097086
sample_title: S15.11356.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097086 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097086

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097086
sample_title: S15.11356.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097087 grouping

Sample field · Grouping · Global correction · GSM3097087

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097087
sample_title: S15.4303.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097087 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097087

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097087
sample_title: S15.4303.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097088 grouping

Sample field · Grouping · Global correction · GSM3097088

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097088
sample_title: S15.4554.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097088 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097088

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097088
sample_title: S15.4554.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097089 grouping

Sample field · Grouping · Global correction · GSM3097089

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097089
sample_title: S15.6746.B
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097089 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097089

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097089
sample_title: S15.6746.B
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097090 grouping

Sample field · Grouping · Global correction · GSM3097090

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097090
sample_title: S15.10296.
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097090 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097090

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097090
sample_title: S15.10296.
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097091 grouping

Sample field · Grouping · Global correction · GSM3097091

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097091
sample_title: S15.9248.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIA

GSM3097091 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097091

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097091
sample_title: S15.9248.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIA

GSM3097092 grouping

Sample field · Grouping · Global correction · GSM3097092

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097092
sample_title: S15.3475.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097092 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097092

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097092
sample_title: S15.3475.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097093 grouping

Sample field · Grouping · Global correction · GSM3097093

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097093
sample_title: S15.11632.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097093 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097093

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097093
sample_title: S15.11632.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097094 grouping

Sample field · Grouping · Global correction · GSM3097094

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097094
sample_title: S15.4629.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097094 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097094

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097094
sample_title: S15.4629.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097095 grouping

Sample field · Grouping · Global correction · GSM3097095

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097095
sample_title: S15.4306.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097095 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097095

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097095
sample_title: S15.4306.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097096 grouping

Sample field · Grouping · Global correction · GSM3097096

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097096
sample_title: S15.4786.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097096 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097096

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097096
sample_title: S15.4786.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097097 grouping

Sample field · Grouping · Global correction · GSM3097097

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097097
sample_title: S15.4787.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097097 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097097

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097097
sample_title: S15.4787.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097098 grouping

Sample field · Grouping · Global correction · GSM3097098

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097098
sample_title: S15.5743.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097098 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097098

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097098
sample_title: S15.5743.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097099 grouping

Sample field · Grouping · Global correction · GSM3097099

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097099
sample_title: S15.5741.A6
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097099 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097099

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097099
sample_title: S15.5741.A6
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097100 grouping

Sample field · Grouping · Global correction · GSM3097100

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097100
sample_title: S15.6736.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097100 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097100

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097100
sample_title: S15.6736.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097101 grouping

Sample field · Grouping · Global correction · GSM3097101

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097101
sample_title: S15.7535.B
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097101 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097101

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097101
sample_title: S15.7535.B
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097102 grouping

Sample field · Grouping · Global correction · GSM3097102

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097102
sample_title: S15.11580.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097102 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097102

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097102
sample_title: S15.11580.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097103 grouping

Sample field · Grouping · Global correction · GSM3097103

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097103
sample_title: S15.11601.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097103 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097103

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097103
sample_title: S15.11601.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097104 grouping

Sample field · Grouping · Global correction · GSM3097104

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097104
sample_title: S15.7247.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097104 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097104

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097104
sample_title: S15.7247.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097105 grouping

Sample field · Grouping · Global correction · GSM3097105

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097105
sample_title: S15.9737.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097105 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097105

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097105
sample_title: S15.9737.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097106 grouping

Sample field · Grouping · Global correction · GSM3097106

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097106
sample_title: S15.9737.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097106 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097106

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097106
sample_title: S15.9737.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097107 grouping

Sample field · Grouping · Global correction · GSM3097107

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097107
sample_title: S15.5029.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097107 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097107

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097107
sample_title: S15.5029.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097108 grouping

Sample field · Grouping · Global correction · GSM3097108

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097108
sample_title: S15.5029.B
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097108 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097108

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097108
sample_title: S15.5029.B
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097109 grouping

Sample field · Grouping · Global correction · GSM3097109

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097109
sample_title: S15.11353.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097109 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097109

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097109
sample_title: S15.11353.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097110 grouping

Sample field · Grouping · Global correction · GSM3097110

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097110
sample_title: S15.12439.
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097110 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097110

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097110
sample_title: S15.12439.
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097111 grouping

Sample field · Grouping · Global correction · GSM3097111

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097111
sample_title: S15.12438.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097111 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097111

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097111
sample_title: S15.12438.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB

GSM3097112 grouping

Sample field · Grouping · Global correction · GSM3097112

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097112
sample_title: S15.11076.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097112 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097112

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097112
sample_title: S15.11076.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097113 grouping

Sample field · Grouping · Global correction · GSM3097113

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097113
sample_title: S15.5743.B
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097113 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097113

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097113
sample_title: S15.5743.B
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097114 grouping

Sample field · Grouping · Global correction · GSM3097114

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097114
sample_title: S15.1874.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097114 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097114

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097114
sample_title: S15.1874.A
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097115 grouping

Sample field · Grouping · Global correction · GSM3097115

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097115
sample_title: S15.8957.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097115 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097115

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097115
sample_title: S15.8957.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097116 grouping

Sample field · Grouping · Global correction · GSM3097116

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097116
sample_title: S15.11600.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097116 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097116

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097116
sample_title: S15.11600.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097117 grouping

Sample field · Grouping · Global correction · GSM3097117

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097117
sample_title: S15.8104.C
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097117 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097117

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097117
sample_title: S15.8104.C
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097118 grouping

Sample field · Grouping · Global correction · GSM3097118

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097118
sample_title: S15.13213.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097118 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097118

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097118
sample_title: S15.13213.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097119 grouping

Sample field · Grouping · Global correction · GSM3097119

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097119
sample_title: S15.6546.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097119 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097119

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097119
sample_title: S15.6546.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097120 grouping

Sample field · Grouping · Global correction · GSM3097120

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097120
sample_title: S15.11353.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097120 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097120

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097120
sample_title: S15.11353.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097121 grouping

Sample field · Grouping · Global correction · GSM3097121

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097121
sample_title: S15.13213.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097121 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097121

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097121
sample_title: S15.13213.B1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2

GSM3097122 grouping

Sample field · Grouping · Global correction · GSM3097122

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097122
sample_title: S16.1596.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097122 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097122

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097122
sample_title: S16.1596.A1
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA

GSM3097123 grouping

Sample field · Grouping · Global correction · GSM3097123

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3097123
sample_title: S16.1854.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097123 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097123

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3097123
sample_title: S16.1854.A2
source_name: Skin Biopsy of tumor/Plaque/Patch
characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

GSM3097124 grouping

Sample field · Grouping · Global correction · GSM3097124

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3097124
sample_title: WD-37320
source_name: Skin Biopsy of normal tissue
characteristics: disease state: normal; tissue: skin; tumor stage: Normal

GSM3097124 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097124

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3097124
sample_title: WD-37320
source_name: Skin Biopsy of normal tissue
characteristics: disease state: normal; tissue: skin; tumor stage: Normal

GSM3097125 grouping

Sample field · Grouping · Global correction · GSM3097125

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3097125
sample_title: WD-37322
source_name: Skin Biopsy of normal tissue
characteristics: disease state: normal; tissue: skin; tumor stage: Normal

GSM3097125 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097125

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3097125
sample_title: WD-37322
source_name: Skin Biopsy of normal tissue
characteristics: disease state: normal; tissue: skin; tumor stage: Normal

GSM3097126 grouping

Sample field · Grouping · Global correction · GSM3097126

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3097126
sample_title: WD-37323
source_name: Skin Biopsy of normal tissue
characteristics: disease state: normal; tissue: skin; tumor stage: Normal

GSM3097126 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3097126

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3097126
sample_title: WD-37323
source_name: Skin Biopsy of normal tissue
characteristics: disease state: normal; tissue: skin; tumor stage: Normal

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession: GSE113113
Sample records: 52 GSM samples

GEO has priority for original metadata under the Phase 3J source rules.
Processed data: available.
Raw data: available.
No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession: GSE113113

No recount3 project identifier has been imported for this dataset.
Once imported, recount3 has priority for processed count availability.
The recount3 source filter excludes this dataset until that linkage exists.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession: GSE113113

No Expression Atlas experiment identifier has been imported for this dataset.
Once imported, Expression Atlas has priority for curated expression experiment links.
The Expression Atlas source filter excludes this dataset until that linkage exists.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession: GSE113113

No PubMed identifier is present in the current runtime metadata.
No live PubMed search is performed from the dataset detail page.

Dataset Feedback

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Original GEO Metadata

dataset_accession: GSE113113
dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted  immune checkpoint profile
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2018-04-13
last_update_date: 2021-12-07
organization_name: City of Hope National Medical Center
department: Computational and Quantitative Medicine
public_date: 2018-08-21
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL16791 Illumina HiSeq 2500 (Homo sapiens)
sub_series: Not available
bioproject: PRJNA450035
supplementary_files: TXT: GSE113113_data_final.txt.gz
series_type: Series

Why It Matched

Tumor vs unmatched normal · Biopsy · suitability 0%.
Prioritized assay: bulk RNA-seq is the active assay expectation.
Downgraded disease context: not a colorectal/GI cancer cohort.
Processed data is available for downstream review.
1 warning require review.

Why It May Not Be Suitable

Disease or condition label could not be normalized.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized.
Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.
Downgraded disease context: not a colorectal/GI cancer cohort.
Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

warning DISEASE_LABEL_UNCLEAR Disease or condition label could not be normalized.

Normalized Fields

162 fields

Field Value Source Origin Confidence Evidence Reason

assay_type bulk RNA-seq dataset GSE113113 Runtime Siftome inference GEO:dataset:GSE113113:b35b5004d1bdaf5e7588d19ffdec8bcbc5189b91ec0795e3790384c7c4400354 high confidence bulk rna-seq dataset_accession: GSE113113 dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted immune checkpoint profile organism: Homo sapiens as... keyword match keyword match: bulk rna-seq

organism Homo sapiens dataset GSE113113 Runtime Siftome inference GEO:dataset:GSE113113:b35b5004d1bdaf5e7588d19ffdec8bcbc5189b91ec0795e3790384c7c4400354 high confidence homo sapiens dataset_accession: GSE113113 dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted immune checkpoint profile organism: Homo sapiens as... keyword match keyword match: homo sapiens

primary_tissue primary tissue sample GSM3097075 Runtime Siftome inference GEO:sample:GSM3097075:92665932feae328420a9469340e5c47040ac5f57f25cb9224d1b7211ac2fba96 low confidence biopsy sample_accession: GSM3097075 sample_title: S15.8147.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097076 Runtime Siftome inference GEO:sample:GSM3097076:ea77193bec194d3662445e68a888ef77e64a67f3fea867e2bdf87e7e62e91401 low confidence biopsy sample_accession: GSM3097076 sample_title: S15.10848.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097077 Runtime Siftome inference GEO:sample:GSM3097077:bf7897cc5f875108313166a7f447d2500ec6a4fc38f85460767ed741ae2ac827 low confidence biopsy sample_accession: GSM3097077 sample_title: S15.6955.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097078 Runtime Siftome inference GEO:sample:GSM3097078:9ec52e65fcb63df42dc3d8e16a4226b92dc73d03b15876f9f6cc6da8cfd3a907 low confidence biopsy sample_accession: GSM3097078 sample_title: S15.7535.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097079 Runtime Siftome inference GEO:sample:GSM3097079:640182561635be6827b11d021754685851eb440f5a822a88f10daf1e7bf808b6 low confidence biopsy sample_accession: GSM3097079 sample_title: S15.6746.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097080 Runtime Siftome inference GEO:sample:GSM3097080:388d65d45ed7d7fe75bf5ae4be4a209faadb36d252a904188e0007bb9a320eae low confidence biopsy sample_accession: GSM3097080 sample_title: S15.5509. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumo... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097081 Runtime Siftome inference GEO:sample:GSM3097081:2490b4ad9c183fb1f5f9dbf490c1b598b7ad82550c9eda5af48c4053d5962577 low confidence biopsy sample_accession: GSM3097081 sample_title: S15.5295.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097082 Runtime Siftome inference GEO:sample:GSM3097082:60fdb95e8bc221d382004c9025195c17fd48ca477a25a093023ccae5475dc9d8 low confidence biopsy sample_accession: GSM3097082 sample_title: S15.5295.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097083 Runtime Siftome inference GEO:sample:GSM3097083:942220da3636278f9970dc4af57bc4f36a665a555928b83e77394689cb98236a low confidence biopsy sample_accession: GSM3097083 sample_title: S15.5506.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097084 Runtime Siftome inference GEO:sample:GSM3097084:58f34a46b5858d8d6e426191bcb8ae98b7c45f406818eaadefe653150689df83 low confidence biopsy sample_accession: GSM3097084 sample_title: S15.11632.B2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097085 Runtime Siftome inference GEO:sample:GSM3097085:b9dd1aabc7e7e60f943a2363a6e4ba660bbbed6e97849ad25c35538ccfdb8075 low confidence biopsy sample_accession: GSM3097085 sample_title: S15.6993.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097086 Runtime Siftome inference GEO:sample:GSM3097086:e9ca96b828847365bcc7ba5df008b314124026eaba90063f3983e525d0c24f9a low confidence biopsy sample_accession: GSM3097086 sample_title: S15.11356.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097087 Runtime Siftome inference GEO:sample:GSM3097087:15d5065594133226d4ac3ad86de761c9159794b98aac66e4746ee43b10be4e99 low confidence biopsy sample_accession: GSM3097087 sample_title: S15.4303.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097088 Runtime Siftome inference GEO:sample:GSM3097088:43c55ab0a08c7a28fdd490ad083c723d717328625e58ad3d0d8c420ec5776e08 low confidence biopsy sample_accession: GSM3097088 sample_title: S15.4554.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097089 Runtime Siftome inference GEO:sample:GSM3097089:4ffa3322c7d60225eaa7065fbf41f73f3aef817b70bac346a8e39f1cdaa3ae73 low confidence biopsy sample_accession: GSM3097089 sample_title: S15.6746.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097090 Runtime Siftome inference GEO:sample:GSM3097090:d8a8733f7f3251e07a0c1d7ee7e924e366243fb2b77ea953b8da7ea1e23bd4d0 low confidence biopsy sample_accession: GSM3097090 sample_title: S15.10296. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097091 Runtime Siftome inference GEO:sample:GSM3097091:09f8255ee3c89d0403f9808764e80bed9a60d7a6bbd0e0800568e24f59e7568f low confidence biopsy sample_accession: GSM3097091 sample_title: S15.9248.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097092 Runtime Siftome inference GEO:sample:GSM3097092:d093e9768d7080d8567cd97cb566404dcfd560fceae268a43ec1cdb5839df113 low confidence biopsy sample_accession: GSM3097092 sample_title: S15.3475.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097093 Runtime Siftome inference GEO:sample:GSM3097093:763f4f5f0ad930420b73799ffec2e19787f8b0115766df03119ea8c5f3c78004 low confidence biopsy sample_accession: GSM3097093 sample_title: S15.11632.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097094 Runtime Siftome inference GEO:sample:GSM3097094:6ab9dac4d404ac3d4ce18262912991512432ff535c75edc22223d32e1dd198d1 low confidence biopsy sample_accession: GSM3097094 sample_title: S15.4629.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097095 Runtime Siftome inference GEO:sample:GSM3097095:1c12d1813e4585725426208c459a76bfadffafe583f70ca8bd780cb9f39176f3 low confidence biopsy sample_accession: GSM3097095 sample_title: S15.4306.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097096 Runtime Siftome inference GEO:sample:GSM3097096:862c1f827af7a1d1fb2ca3e145d08cc4c9b07987d6eb7d3b24d399e2b01a2c55 low confidence biopsy sample_accession: GSM3097096 sample_title: S15.4786.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097097 Runtime Siftome inference GEO:sample:GSM3097097:c528aad6f3f23f1d39cadd5e6e3ee6c0ffc6e8ac077e78999c85efa52bb35166 low confidence biopsy sample_accession: GSM3097097 sample_title: S15.4787.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097098 Runtime Siftome inference GEO:sample:GSM3097098:e8b3f785d78265851da99468c877fb9b8eb1f616b5c86a8b73a460bb7a8aa136 low confidence biopsy sample_accession: GSM3097098 sample_title: S15.5743.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097099 Runtime Siftome inference GEO:sample:GSM3097099:304d378ec8c571593c8821415d511b918b4f03c5bbad73ea281dd84f48188553 low confidence biopsy sample_accession: GSM3097099 sample_title: S15.5741.A6 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097100 Runtime Siftome inference GEO:sample:GSM3097100:9450353455a13dd23b2ba9e08dc8798058dfe5a1ad1d07fd2712d269461aa2d4 low confidence biopsy sample_accession: GSM3097100 sample_title: S15.6736.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097101 Runtime Siftome inference GEO:sample:GSM3097101:c2de188b554ec877290fe5e20c359e2e672a7f6ea3674907386f16a5e5198c97 low confidence biopsy sample_accession: GSM3097101 sample_title: S15.7535.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097102 Runtime Siftome inference GEO:sample:GSM3097102:8c9578761ad471e8e0ebcb7c762db9c0e37f8f66a36d8ea0532864df1bc1d89d low confidence biopsy sample_accession: GSM3097102 sample_title: S15.11580.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097103 Runtime Siftome inference GEO:sample:GSM3097103:2ffff0135a54d96a8b571837253b7dd38dc2bf7d56a9d52767dfcb8c4b3e7a8d low confidence biopsy sample_accession: GSM3097103 sample_title: S15.11601.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097104 Runtime Siftome inference GEO:sample:GSM3097104:cdd40a6521712829e9f43a9d1e2f5f5a7cb319f05116a0b4e72b0316b352ac8c low confidence biopsy sample_accession: GSM3097104 sample_title: S15.7247.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097105 Runtime Siftome inference GEO:sample:GSM3097105:c0f65d2a088ab63a03c5228ad147de45ac90cb7dd67f4454723daeef84652ecd low confidence biopsy sample_accession: GSM3097105 sample_title: S15.9737.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097106 Runtime Siftome inference GEO:sample:GSM3097106:e238c172aea43b1cea86d8fe7944a40b210f23f58967a9a981baaa7f41664e31 low confidence biopsy sample_accession: GSM3097106 sample_title: S15.9737.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097107 Runtime Siftome inference GEO:sample:GSM3097107:ba54fee4e3cd13df092402d51ea26226f742d0fad975f7eca3e4eff9f2f00710 low confidence biopsy sample_accession: GSM3097107 sample_title: S15.5029.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097108 Runtime Siftome inference GEO:sample:GSM3097108:9a572acd0b847b1442b02bb23d0f2ef426195c64b12236f1fde14bd43a3295e6 low confidence biopsy sample_accession: GSM3097108 sample_title: S15.5029.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097109 Runtime Siftome inference GEO:sample:GSM3097109:3407bd2adf5f4d92bb6f767eccf476581decae4182cc58c63193d0cc58d4b92e low confidence biopsy sample_accession: GSM3097109 sample_title: S15.11353.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097110 Runtime Siftome inference GEO:sample:GSM3097110:f98d0147b236f1f390b66451c0150539392b14eb1b6acf81655638e3eab038e1 low confidence biopsy sample_accession: GSM3097110 sample_title: S15.12439. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097111 Runtime Siftome inference GEO:sample:GSM3097111:eafff972fd8cf5b768882c49144cd3b1eedb41c46356a311abcdf03c2c1203dd low confidence biopsy sample_accession: GSM3097111 sample_title: S15.12438.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097112 Runtime Siftome inference GEO:sample:GSM3097112:d9a5fb1d72eea59367ea19644e00fb77aacfd593a04e8a68ec9caa657f92ad02 low confidence biopsy sample_accession: GSM3097112 sample_title: S15.11076.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097113 Runtime Siftome inference GEO:sample:GSM3097113:e9d11972e5dc034e6e36a4acc7a80edae50c6d3b2675fdee3ca92dc822605a57 low confidence biopsy sample_accession: GSM3097113 sample_title: S15.5743.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097114 Runtime Siftome inference GEO:sample:GSM3097114:cffca59af38fbd826816f5d8a256ff12916f8f2e76b082988a5d7780b3640409 low confidence biopsy sample_accession: GSM3097114 sample_title: S15.1874.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097115 Runtime Siftome inference GEO:sample:GSM3097115:c1dd1b6c91ee4d470c9ccaf1c416e7c3cb069bc454ca4f49f2c1029292c735e9 low confidence biopsy sample_accession: GSM3097115 sample_title: S15.8957.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097116 Runtime Siftome inference GEO:sample:GSM3097116:7c9220aea783ceb73328357c9396b85cc799e9699882a1f094f5dcd7c3cd5f39 low confidence biopsy sample_accession: GSM3097116 sample_title: S15.11600.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097117 Runtime Siftome inference GEO:sample:GSM3097117:54cbdd6e64b87f04c7ea20d7bbd1121125dd93c512a3478c7654b9aa80090c6f low confidence biopsy sample_accession: GSM3097117 sample_title: S15.8104.C source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097118 Runtime Siftome inference GEO:sample:GSM3097118:e9af01f727fd648e90f6d0b0848f56bcef39dfbdbfbc76ab4716fd370f76d9e4 low confidence biopsy sample_accession: GSM3097118 sample_title: S15.13213.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097119 Runtime Siftome inference GEO:sample:GSM3097119:9e0938471ad72a995e450b1ada5d60e9606595a6ec700fea063e29fad6b23e00 low confidence biopsy sample_accession: GSM3097119 sample_title: S15.6546.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097120 Runtime Siftome inference GEO:sample:GSM3097120:da50e4bc6a09b407a23ce635a7c7d078d7de2ccd4db7677c76b9a465446ef584 low confidence biopsy sample_accession: GSM3097120 sample_title: S15.11353.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097121 Runtime Siftome inference GEO:sample:GSM3097121:44ae4d774f30a7c259efe04993077a1d96323d92926bf7d23930b634763f55b3 low confidence biopsy sample_accession: GSM3097121 sample_title: S15.13213.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097122 Runtime Siftome inference GEO:sample:GSM3097122:b6bc4089018aa6a3252c260481fd22e01dce47f3632ed4094dbfa361d5f3cb99 low confidence biopsy sample_accession: GSM3097122 sample_title: S16.1596.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097123 Runtime Siftome inference GEO:sample:GSM3097123:70fb1c56cbca2a7ab8b5eb6cbcd6f91bf1dbc13fee8ec256db2908696a4d9dc6 low confidence biopsy sample_accession: GSM3097123 sample_title: S16.1854.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097124 Runtime Siftome inference GEO:sample:GSM3097124:c698dbc9399f2c57e5308cb5590e05b67491309e4677bc7242322f16a2a9943f low confidence biopsy sample_accession: GSM3097124 sample_title: WD-37320 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37320 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097125 Runtime Siftome inference GEO:sample:GSM3097125:67edb8c30853486d22b121b4bc314630a9e43ccc9f03f5b16addd789214bc944 low confidence biopsy sample_accession: GSM3097125 sample_title: WD-37322 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37322 controlled vocabulary controlled vocabulary primary tissue match: biopsy

primary_tissue primary tissue sample GSM3097126 Runtime Siftome inference GEO:sample:GSM3097126:8a0ca89705e493c1521f298014b8c0b9b1e0cf838248bfa8949eadc6d6dbb477 low confidence biopsy sample_accession: GSM3097126 sample_title: WD-37323 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37323 controlled vocabulary controlled vocabulary primary tissue match: biopsy

sample_type tumor sample sample GSM3097075 Runtime Siftome inference GEO:sample:GSM3097075:92665932feae328420a9469340e5c47040ac5f57f25cb9224d1b7211ac2fba96 low confidence tumor sample_accession: GSM3097075 sample_title: S15.8147.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097076 Runtime Siftome inference GEO:sample:GSM3097076:ea77193bec194d3662445e68a888ef77e64a67f3fea867e2bdf87e7e62e91401 low confidence tumor sample_accession: GSM3097076 sample_title: S15.10848.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097077 Runtime Siftome inference GEO:sample:GSM3097077:bf7897cc5f875108313166a7f447d2500ec6a4fc38f85460767ed741ae2ac827 low confidence tumor sample_accession: GSM3097077 sample_title: S15.6955.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097078 Runtime Siftome inference GEO:sample:GSM3097078:9ec52e65fcb63df42dc3d8e16a4226b92dc73d03b15876f9f6cc6da8cfd3a907 low confidence tumor sample_accession: GSM3097078 sample_title: S15.7535.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097079 Runtime Siftome inference GEO:sample:GSM3097079:640182561635be6827b11d021754685851eb440f5a822a88f10daf1e7bf808b6 low confidence tumor sample_accession: GSM3097079 sample_title: S15.6746.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097080 Runtime Siftome inference GEO:sample:GSM3097080:388d65d45ed7d7fe75bf5ae4be4a209faadb36d252a904188e0007bb9a320eae low confidence tumor sample_accession: GSM3097080 sample_title: S15.5509. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumo... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097081 Runtime Siftome inference GEO:sample:GSM3097081:2490b4ad9c183fb1f5f9dbf490c1b598b7ad82550c9eda5af48c4053d5962577 low confidence tumor sample_accession: GSM3097081 sample_title: S15.5295.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097082 Runtime Siftome inference GEO:sample:GSM3097082:60fdb95e8bc221d382004c9025195c17fd48ca477a25a093023ccae5475dc9d8 low confidence tumor sample_accession: GSM3097082 sample_title: S15.5295.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097083 Runtime Siftome inference GEO:sample:GSM3097083:942220da3636278f9970dc4af57bc4f36a665a555928b83e77394689cb98236a low confidence tumor sample_accession: GSM3097083 sample_title: S15.5506.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097084 Runtime Siftome inference GEO:sample:GSM3097084:58f34a46b5858d8d6e426191bcb8ae98b7c45f406818eaadefe653150689df83 low confidence tumor sample_accession: GSM3097084 sample_title: S15.11632.B2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097085 Runtime Siftome inference GEO:sample:GSM3097085:b9dd1aabc7e7e60f943a2363a6e4ba660bbbed6e97849ad25c35538ccfdb8075 low confidence tumor sample_accession: GSM3097085 sample_title: S15.6993.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097086 Runtime Siftome inference GEO:sample:GSM3097086:e9ca96b828847365bcc7ba5df008b314124026eaba90063f3983e525d0c24f9a low confidence tumor sample_accession: GSM3097086 sample_title: S15.11356.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097087 Runtime Siftome inference GEO:sample:GSM3097087:15d5065594133226d4ac3ad86de761c9159794b98aac66e4746ee43b10be4e99 low confidence tumor sample_accession: GSM3097087 sample_title: S15.4303.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097088 Runtime Siftome inference GEO:sample:GSM3097088:43c55ab0a08c7a28fdd490ad083c723d717328625e58ad3d0d8c420ec5776e08 low confidence tumor sample_accession: GSM3097088 sample_title: S15.4554.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097089 Runtime Siftome inference GEO:sample:GSM3097089:4ffa3322c7d60225eaa7065fbf41f73f3aef817b70bac346a8e39f1cdaa3ae73 low confidence tumor sample_accession: GSM3097089 sample_title: S15.6746.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097090 Runtime Siftome inference GEO:sample:GSM3097090:d8a8733f7f3251e07a0c1d7ee7e924e366243fb2b77ea953b8da7ea1e23bd4d0 low confidence tumor sample_accession: GSM3097090 sample_title: S15.10296. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097091 Runtime Siftome inference GEO:sample:GSM3097091:09f8255ee3c89d0403f9808764e80bed9a60d7a6bbd0e0800568e24f59e7568f low confidence tumor sample_accession: GSM3097091 sample_title: S15.9248.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097092 Runtime Siftome inference GEO:sample:GSM3097092:d093e9768d7080d8567cd97cb566404dcfd560fceae268a43ec1cdb5839df113 low confidence tumor sample_accession: GSM3097092 sample_title: S15.3475.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097093 Runtime Siftome inference GEO:sample:GSM3097093:763f4f5f0ad930420b73799ffec2e19787f8b0115766df03119ea8c5f3c78004 low confidence tumor sample_accession: GSM3097093 sample_title: S15.11632.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097094 Runtime Siftome inference GEO:sample:GSM3097094:6ab9dac4d404ac3d4ce18262912991512432ff535c75edc22223d32e1dd198d1 low confidence tumor sample_accession: GSM3097094 sample_title: S15.4629.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097095 Runtime Siftome inference GEO:sample:GSM3097095:1c12d1813e4585725426208c459a76bfadffafe583f70ca8bd780cb9f39176f3 low confidence tumor sample_accession: GSM3097095 sample_title: S15.4306.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097096 Runtime Siftome inference GEO:sample:GSM3097096:862c1f827af7a1d1fb2ca3e145d08cc4c9b07987d6eb7d3b24d399e2b01a2c55 low confidence tumor sample_accession: GSM3097096 sample_title: S15.4786.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097097 Runtime Siftome inference GEO:sample:GSM3097097:c528aad6f3f23f1d39cadd5e6e3ee6c0ffc6e8ac077e78999c85efa52bb35166 low confidence tumor sample_accession: GSM3097097 sample_title: S15.4787.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097098 Runtime Siftome inference GEO:sample:GSM3097098:e8b3f785d78265851da99468c877fb9b8eb1f616b5c86a8b73a460bb7a8aa136 low confidence tumor sample_accession: GSM3097098 sample_title: S15.5743.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097099 Runtime Siftome inference GEO:sample:GSM3097099:304d378ec8c571593c8821415d511b918b4f03c5bbad73ea281dd84f48188553 low confidence tumor sample_accession: GSM3097099 sample_title: S15.5741.A6 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097100 Runtime Siftome inference GEO:sample:GSM3097100:9450353455a13dd23b2ba9e08dc8798058dfe5a1ad1d07fd2712d269461aa2d4 low confidence tumor sample_accession: GSM3097100 sample_title: S15.6736.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097101 Runtime Siftome inference GEO:sample:GSM3097101:c2de188b554ec877290fe5e20c359e2e672a7f6ea3674907386f16a5e5198c97 low confidence tumor sample_accession: GSM3097101 sample_title: S15.7535.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097102 Runtime Siftome inference GEO:sample:GSM3097102:8c9578761ad471e8e0ebcb7c762db9c0e37f8f66a36d8ea0532864df1bc1d89d low confidence tumor sample_accession: GSM3097102 sample_title: S15.11580.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097103 Runtime Siftome inference GEO:sample:GSM3097103:2ffff0135a54d96a8b571837253b7dd38dc2bf7d56a9d52767dfcb8c4b3e7a8d low confidence tumor sample_accession: GSM3097103 sample_title: S15.11601.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097104 Runtime Siftome inference GEO:sample:GSM3097104:cdd40a6521712829e9f43a9d1e2f5f5a7cb319f05116a0b4e72b0316b352ac8c low confidence tumor sample_accession: GSM3097104 sample_title: S15.7247.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097105 Runtime Siftome inference GEO:sample:GSM3097105:c0f65d2a088ab63a03c5228ad147de45ac90cb7dd67f4454723daeef84652ecd low confidence tumor sample_accession: GSM3097105 sample_title: S15.9737.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097106 Runtime Siftome inference GEO:sample:GSM3097106:e238c172aea43b1cea86d8fe7944a40b210f23f58967a9a981baaa7f41664e31 low confidence tumor sample_accession: GSM3097106 sample_title: S15.9737.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097107 Runtime Siftome inference GEO:sample:GSM3097107:ba54fee4e3cd13df092402d51ea26226f742d0fad975f7eca3e4eff9f2f00710 low confidence tumor sample_accession: GSM3097107 sample_title: S15.5029.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097108 Runtime Siftome inference GEO:sample:GSM3097108:9a572acd0b847b1442b02bb23d0f2ef426195c64b12236f1fde14bd43a3295e6 low confidence tumor sample_accession: GSM3097108 sample_title: S15.5029.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097109 Runtime Siftome inference GEO:sample:GSM3097109:3407bd2adf5f4d92bb6f767eccf476581decae4182cc58c63193d0cc58d4b92e low confidence tumor sample_accession: GSM3097109 sample_title: S15.11353.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097110 Runtime Siftome inference GEO:sample:GSM3097110:f98d0147b236f1f390b66451c0150539392b14eb1b6acf81655638e3eab038e1 low confidence tumor sample_accession: GSM3097110 sample_title: S15.12439. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097111 Runtime Siftome inference GEO:sample:GSM3097111:eafff972fd8cf5b768882c49144cd3b1eedb41c46356a311abcdf03c2c1203dd low confidence tumor sample_accession: GSM3097111 sample_title: S15.12438.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097112 Runtime Siftome inference GEO:sample:GSM3097112:d9a5fb1d72eea59367ea19644e00fb77aacfd593a04e8a68ec9caa657f92ad02 low confidence tumor sample_accession: GSM3097112 sample_title: S15.11076.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097113 Runtime Siftome inference GEO:sample:GSM3097113:e9d11972e5dc034e6e36a4acc7a80edae50c6d3b2675fdee3ca92dc822605a57 low confidence tumor sample_accession: GSM3097113 sample_title: S15.5743.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097114 Runtime Siftome inference GEO:sample:GSM3097114:cffca59af38fbd826816f5d8a256ff12916f8f2e76b082988a5d7780b3640409 low confidence tumor sample_accession: GSM3097114 sample_title: S15.1874.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097115 Runtime Siftome inference GEO:sample:GSM3097115:c1dd1b6c91ee4d470c9ccaf1c416e7c3cb069bc454ca4f49f2c1029292c735e9 low confidence tumor sample_accession: GSM3097115 sample_title: S15.8957.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097116 Runtime Siftome inference GEO:sample:GSM3097116:7c9220aea783ceb73328357c9396b85cc799e9699882a1f094f5dcd7c3cd5f39 low confidence tumor sample_accession: GSM3097116 sample_title: S15.11600.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097117 Runtime Siftome inference GEO:sample:GSM3097117:54cbdd6e64b87f04c7ea20d7bbd1121125dd93c512a3478c7654b9aa80090c6f low confidence tumor sample_accession: GSM3097117 sample_title: S15.8104.C source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097118 Runtime Siftome inference GEO:sample:GSM3097118:e9af01f727fd648e90f6d0b0848f56bcef39dfbdbfbc76ab4716fd370f76d9e4 low confidence tumor sample_accession: GSM3097118 sample_title: S15.13213.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097119 Runtime Siftome inference GEO:sample:GSM3097119:9e0938471ad72a995e450b1ada5d60e9606595a6ec700fea063e29fad6b23e00 low confidence tumor sample_accession: GSM3097119 sample_title: S15.6546.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097120 Runtime Siftome inference GEO:sample:GSM3097120:da50e4bc6a09b407a23ce635a7c7d078d7de2ccd4db7677c76b9a465446ef584 low confidence tumor sample_accession: GSM3097120 sample_title: S15.11353.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097121 Runtime Siftome inference GEO:sample:GSM3097121:44ae4d774f30a7c259efe04993077a1d96323d92926bf7d23930b634763f55b3 low confidence tumor sample_accession: GSM3097121 sample_title: S15.13213.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097122 Runtime Siftome inference GEO:sample:GSM3097122:b6bc4089018aa6a3252c260481fd22e01dce47f3632ed4094dbfa361d5f3cb99 low confidence tumor sample_accession: GSM3097122 sample_title: S16.1596.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM3097123 Runtime Siftome inference GEO:sample:GSM3097123:70fb1c56cbca2a7ab8b5eb6cbcd6f91bf1dbc13fee8ec256db2908696a4d9dc6 low confidence tumor sample_accession: GSM3097123 sample_title: S16.1854.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3097124 Runtime Siftome inference GEO:sample:GSM3097124:c698dbc9399f2c57e5308cb5590e05b67491309e4677bc7242322f16a2a9943f low confidence normal sample_accession: GSM3097124 sample_title: WD-37320 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37320 controlled vocabulary controlled vocabulary sample type match: normal

sample_type tumor sample sample GSM3097124 Runtime Siftome inference GEO:sample:GSM3097124:c698dbc9399f2c57e5308cb5590e05b67491309e4677bc7242322f16a2a9943f low confidence tumor sample_accession: GSM3097124 sample_title: WD-37320 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37320 controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3097125 Runtime Siftome inference GEO:sample:GSM3097125:67edb8c30853486d22b121b4bc314630a9e43ccc9f03f5b16addd789214bc944 low confidence normal sample_accession: GSM3097125 sample_title: WD-37322 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37322 controlled vocabulary controlled vocabulary sample type match: normal

sample_type tumor sample sample GSM3097125 Runtime Siftome inference GEO:sample:GSM3097125:67edb8c30853486d22b121b4bc314630a9e43ccc9f03f5b16addd789214bc944 low confidence tumor sample_accession: GSM3097125 sample_title: WD-37322 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37322 controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3097126 Runtime Siftome inference GEO:sample:GSM3097126:8a0ca89705e493c1521f298014b8c0b9b1e0cf838248bfa8949eadc6d6dbb477 low confidence normal sample_accession: GSM3097126 sample_title: WD-37323 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37323 controlled vocabulary controlled vocabulary sample type match: normal

sample_type tumor sample sample GSM3097126 Runtime Siftome inference GEO:sample:GSM3097126:8a0ca89705e493c1521f298014b8c0b9b1e0cf838248bfa8949eadc6d6dbb477 low confidence tumor sample_accession: GSM3097126 sample_title: WD-37323 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37323 controlled vocabulary controlled vocabulary sample type match: tumor

tissue skin dataset GSE113113 Runtime Siftome inference GEO:dataset:GSE113113:b35b5004d1bdaf5e7588d19ffdec8bcbc5189b91ec0795e3790384c7c4400354 low confidence skin dataset_accession: GSE113113 dataset_title: Primary T cells from cutaneous T-cell lymphoma skin explants display an exhausted immune checkpoint profile organism: Homo sapiens as... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097075 Runtime Siftome inference GEO:sample:GSM3097075:92665932feae328420a9469340e5c47040ac5f57f25cb9224d1b7211ac2fba96 low confidence skin sample_accession: GSM3097075 sample_title: S15.8147.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097076 Runtime Siftome inference GEO:sample:GSM3097076:ea77193bec194d3662445e68a888ef77e64a67f3fea867e2bdf87e7e62e91401 low confidence skin sample_accession: GSM3097076 sample_title: S15.10848.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097077 Runtime Siftome inference GEO:sample:GSM3097077:bf7897cc5f875108313166a7f447d2500ec6a4fc38f85460767ed741ae2ac827 low confidence skin sample_accession: GSM3097077 sample_title: S15.6955.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097078 Runtime Siftome inference GEO:sample:GSM3097078:9ec52e65fcb63df42dc3d8e16a4226b92dc73d03b15876f9f6cc6da8cfd3a907 low confidence skin sample_accession: GSM3097078 sample_title: S15.7535.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097079 Runtime Siftome inference GEO:sample:GSM3097079:640182561635be6827b11d021754685851eb440f5a822a88f10daf1e7bf808b6 low confidence skin sample_accession: GSM3097079 sample_title: S15.6746.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097080 Runtime Siftome inference GEO:sample:GSM3097080:388d65d45ed7d7fe75bf5ae4be4a209faadb36d252a904188e0007bb9a320eae low confidence skin sample_accession: GSM3097080 sample_title: S15.5509. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tumo... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097081 Runtime Siftome inference GEO:sample:GSM3097081:2490b4ad9c183fb1f5f9dbf490c1b598b7ad82550c9eda5af48c4053d5962577 low confidence skin sample_accession: GSM3097081 sample_title: S15.5295.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097082 Runtime Siftome inference GEO:sample:GSM3097082:60fdb95e8bc221d382004c9025195c17fd48ca477a25a093023ccae5475dc9d8 low confidence skin sample_accession: GSM3097082 sample_title: S15.5295.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097083 Runtime Siftome inference GEO:sample:GSM3097083:942220da3636278f9970dc4af57bc4f36a665a555928b83e77394689cb98236a low confidence skin sample_accession: GSM3097083 sample_title: S15.5506.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097084 Runtime Siftome inference GEO:sample:GSM3097084:58f34a46b5858d8d6e426191bcb8ae98b7c45f406818eaadefe653150689df83 low confidence skin sample_accession: GSM3097084 sample_title: S15.11632.B2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097085 Runtime Siftome inference GEO:sample:GSM3097085:b9dd1aabc7e7e60f943a2363a6e4ba660bbbed6e97849ad25c35538ccfdb8075 low confidence skin sample_accession: GSM3097085 sample_title: S15.6993.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097086 Runtime Siftome inference GEO:sample:GSM3097086:e9ca96b828847365bcc7ba5df008b314124026eaba90063f3983e525d0c24f9a low confidence skin sample_accession: GSM3097086 sample_title: S15.11356.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097087 Runtime Siftome inference GEO:sample:GSM3097087:15d5065594133226d4ac3ad86de761c9159794b98aac66e4746ee43b10be4e99 low confidence skin sample_accession: GSM3097087 sample_title: S15.4303.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097088 Runtime Siftome inference GEO:sample:GSM3097088:43c55ab0a08c7a28fdd490ad083c723d717328625e58ad3d0d8c420ec5776e08 low confidence skin sample_accession: GSM3097088 sample_title: S15.4554.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097089 Runtime Siftome inference GEO:sample:GSM3097089:4ffa3322c7d60225eaa7065fbf41f73f3aef817b70bac346a8e39f1cdaa3ae73 low confidence skin sample_accession: GSM3097089 sample_title: S15.6746.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097090 Runtime Siftome inference GEO:sample:GSM3097090:d8a8733f7f3251e07a0c1d7ee7e924e366243fb2b77ea953b8da7ea1e23bd4d0 low confidence skin sample_accession: GSM3097090 sample_title: S15.10296. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097091 Runtime Siftome inference GEO:sample:GSM3097091:09f8255ee3c89d0403f9808764e80bed9a60d7a6bbd0e0800568e24f59e7568f low confidence skin sample_accession: GSM3097091 sample_title: S15.9248.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097092 Runtime Siftome inference GEO:sample:GSM3097092:d093e9768d7080d8567cd97cb566404dcfd560fceae268a43ec1cdb5839df113 low confidence skin sample_accession: GSM3097092 sample_title: S15.3475.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097093 Runtime Siftome inference GEO:sample:GSM3097093:763f4f5f0ad930420b73799ffec2e19787f8b0115766df03119ea8c5f3c78004 low confidence skin sample_accession: GSM3097093 sample_title: S15.11632.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097094 Runtime Siftome inference GEO:sample:GSM3097094:6ab9dac4d404ac3d4ce18262912991512432ff535c75edc22223d32e1dd198d1 low confidence skin sample_accession: GSM3097094 sample_title: S15.4629.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097095 Runtime Siftome inference GEO:sample:GSM3097095:1c12d1813e4585725426208c459a76bfadffafe583f70ca8bd780cb9f39176f3 low confidence skin sample_accession: GSM3097095 sample_title: S15.4306.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097096 Runtime Siftome inference GEO:sample:GSM3097096:862c1f827af7a1d1fb2ca3e145d08cc4c9b07987d6eb7d3b24d399e2b01a2c55 low confidence skin sample_accession: GSM3097096 sample_title: S15.4786.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097097 Runtime Siftome inference GEO:sample:GSM3097097:c528aad6f3f23f1d39cadd5e6e3ee6c0ffc6e8ac077e78999c85efa52bb35166 low confidence skin sample_accession: GSM3097097 sample_title: S15.4787.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097098 Runtime Siftome inference GEO:sample:GSM3097098:e8b3f785d78265851da99468c877fb9b8eb1f616b5c86a8b73a460bb7a8aa136 low confidence skin sample_accession: GSM3097098 sample_title: S15.5743.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097099 Runtime Siftome inference GEO:sample:GSM3097099:304d378ec8c571593c8821415d511b918b4f03c5bbad73ea281dd84f48188553 low confidence skin sample_accession: GSM3097099 sample_title: S15.5741.A6 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097100 Runtime Siftome inference GEO:sample:GSM3097100:9450353455a13dd23b2ba9e08dc8798058dfe5a1ad1d07fd2712d269461aa2d4 low confidence skin sample_accession: GSM3097100 sample_title: S15.6736.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097101 Runtime Siftome inference GEO:sample:GSM3097101:c2de188b554ec877290fe5e20c359e2e672a7f6ea3674907386f16a5e5198c97 low confidence skin sample_accession: GSM3097101 sample_title: S15.7535.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097102 Runtime Siftome inference GEO:sample:GSM3097102:8c9578761ad471e8e0ebcb7c762db9c0e37f8f66a36d8ea0532864df1bc1d89d low confidence skin sample_accession: GSM3097102 sample_title: S15.11580.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097103 Runtime Siftome inference GEO:sample:GSM3097103:2ffff0135a54d96a8b571837253b7dd38dc2bf7d56a9d52767dfcb8c4b3e7a8d low confidence skin sample_accession: GSM3097103 sample_title: S15.11601.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097104 Runtime Siftome inference GEO:sample:GSM3097104:cdd40a6521712829e9f43a9d1e2f5f5a7cb319f05116a0b4e72b0316b352ac8c low confidence skin sample_accession: GSM3097104 sample_title: S15.7247.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097105 Runtime Siftome inference GEO:sample:GSM3097105:c0f65d2a088ab63a03c5228ad147de45ac90cb7dd67f4454723daeef84652ecd low confidence skin sample_accession: GSM3097105 sample_title: S15.9737.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097106 Runtime Siftome inference GEO:sample:GSM3097106:e238c172aea43b1cea86d8fe7944a40b210f23f58967a9a981baaa7f41664e31 low confidence skin sample_accession: GSM3097106 sample_title: S15.9737.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097107 Runtime Siftome inference GEO:sample:GSM3097107:ba54fee4e3cd13df092402d51ea26226f742d0fad975f7eca3e4eff9f2f00710 low confidence skin sample_accession: GSM3097107 sample_title: S15.5029.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097108 Runtime Siftome inference GEO:sample:GSM3097108:9a572acd0b847b1442b02bb23d0f2ef426195c64b12236f1fde14bd43a3295e6 low confidence skin sample_accession: GSM3097108 sample_title: S15.5029.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097109 Runtime Siftome inference GEO:sample:GSM3097109:3407bd2adf5f4d92bb6f767eccf476581decae4182cc58c63193d0cc58d4b92e low confidence skin sample_accession: GSM3097109 sample_title: S15.11353.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097110 Runtime Siftome inference GEO:sample:GSM3097110:f98d0147b236f1f390b66451c0150539392b14eb1b6acf81655638e3eab038e1 low confidence skin sample_accession: GSM3097110 sample_title: S15.12439. source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097111 Runtime Siftome inference GEO:sample:GSM3097111:eafff972fd8cf5b768882c49144cd3b1eedb41c46356a311abcdf03c2c1203dd low confidence skin sample_accession: GSM3097111 sample_title: S15.12438.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097112 Runtime Siftome inference GEO:sample:GSM3097112:d9a5fb1d72eea59367ea19644e00fb77aacfd593a04e8a68ec9caa657f92ad02 low confidence skin sample_accession: GSM3097112 sample_title: S15.11076.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097113 Runtime Siftome inference GEO:sample:GSM3097113:e9d11972e5dc034e6e36a4acc7a80edae50c6d3b2675fdee3ca92dc822605a57 low confidence skin sample_accession: GSM3097113 sample_title: S15.5743.B source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097114 Runtime Siftome inference GEO:sample:GSM3097114:cffca59af38fbd826816f5d8a256ff12916f8f2e76b082988a5d7780b3640409 low confidence skin sample_accession: GSM3097114 sample_title: S15.1874.A source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097115 Runtime Siftome inference GEO:sample:GSM3097115:c1dd1b6c91ee4d470c9ccaf1c416e7c3cb069bc454ca4f49f2c1029292c735e9 low confidence skin sample_accession: GSM3097115 sample_title: S15.8957.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097116 Runtime Siftome inference GEO:sample:GSM3097116:7c9220aea783ceb73328357c9396b85cc799e9699882a1f094f5dcd7c3cd5f39 low confidence skin sample_accession: GSM3097116 sample_title: S15.11600.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097117 Runtime Siftome inference GEO:sample:GSM3097117:54cbdd6e64b87f04c7ea20d7bbd1121125dd93c512a3478c7654b9aa80090c6f low confidence skin sample_accession: GSM3097117 sample_title: S15.8104.C source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tum... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097118 Runtime Siftome inference GEO:sample:GSM3097118:e9af01f727fd648e90f6d0b0848f56bcef39dfbdbfbc76ab4716fd370f76d9e4 low confidence skin sample_accession: GSM3097118 sample_title: S15.13213.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097119 Runtime Siftome inference GEO:sample:GSM3097119:9e0938471ad72a995e450b1ada5d60e9606595a6ec700fea063e29fad6b23e00 low confidence skin sample_accession: GSM3097119 sample_title: S15.6546.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097120 Runtime Siftome inference GEO:sample:GSM3097120:da50e4bc6a09b407a23ce635a7c7d078d7de2ccd4db7677c76b9a465446ef584 low confidence skin sample_accession: GSM3097120 sample_title: S15.11353.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097121 Runtime Siftome inference GEO:sample:GSM3097121:44ae4d774f30a7c259efe04993077a1d96323d92926bf7d23930b634763f55b3 low confidence skin sample_accession: GSM3097121 sample_title: S15.13213.B1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; t... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097122 Runtime Siftome inference GEO:sample:GSM3097122:b6bc4089018aa6a3252c260481fd22e01dce47f3632ed4094dbfa361d5f3cb99 low confidence skin sample_accession: GSM3097122 sample_title: S16.1596.A1 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097123 Runtime Siftome inference GEO:sample:GSM3097123:70fb1c56cbca2a7ab8b5eb6cbcd6f91bf1dbc13fee8ec256db2908696a4d9dc6 low confidence skin sample_accession: GSM3097123 sample_title: S16.1854.A2 source_name: Skin Biopsy of tumor/Plaque/Patch characteristics: disease state: Cutaneous T-cell lymphoma; tissue: skin; tu... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097124 Runtime Siftome inference GEO:sample:GSM3097124:c698dbc9399f2c57e5308cb5590e05b67491309e4677bc7242322f16a2a9943f low confidence skin sample_accession: GSM3097124 sample_title: WD-37320 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37320 controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097125 Runtime Siftome inference GEO:sample:GSM3097125:67edb8c30853486d22b121b4bc314630a9e43ccc9f03f5b16addd789214bc944 low confidence skin sample_accession: GSM3097125 sample_title: WD-37322 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37322 controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3097126 Runtime Siftome inference GEO:sample:GSM3097126:8a0ca89705e493c1521f298014b8c0b9b1e0cf838248bfa8949eadc6d6dbb477 low confidence skin sample_accession: GSM3097126 sample_title: WD-37323 source_name: Skin Biopsy of normal tissue characteristics: disease state: normal; tissue: skin; tumor stage: Normal WD-37323 controlled vocabulary controlled vocabulary tissue match: skin

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

49

GSM3097075 S15.8147.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097076 S15.10848.A tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097077 S15.6955.A tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097078 S15.7535.A tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097079 S15.6746.A tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097080 S15.5509. tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097081 S15.5295.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097082 S15.5295.B1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097083 S15.5506.A tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097084 S15.11632.B2 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097085 S15.6993.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097086 S15.11356.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097087 S15.4303.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097088 S15.4554.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097089 S15.6746.B tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097090 S15.10296. tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097091 S15.9248.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIA
GSM3097092 S15.3475.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097093 S15.11632.A2 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097094 S15.4629.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097095 S15.4306.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097096 S15.4786.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097097 S15.4787.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097098 S15.5743.A tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097099 S15.5741.A6 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097100 S15.6736.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097101 S15.7535.B tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097102 S15.11580.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097103 S15.11601.A2 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097104 S15.7247.B1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097105 S15.9737.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097106 S15.9737.B1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097107 S15.5029.A tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097108 S15.5029.B tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097109 S15.11353.B1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097110 S15.12439. tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097111 S15.12438.B1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097112 S15.11076.B1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097113 S15.5743.B tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097114 S15.1874.A tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097115 S15.8957.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097116 S15.11600.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097117 S15.8104.C tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097118 S15.13213.A2 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097119 S15.6546.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097120 S15.11353.A2 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097121 S15.13213.B1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097122 S16.1596.A1 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097123 S16.1854.A2 tumor sample Case marker detected. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

Possible control samples

Samples currently treated as controls or baseline.

3

GSM3097124 WD-37320 normal tissue Control marker detected. Skin Biopsy of normal tissue disease state: normal; tissue: skin; tumor stage: Normal
GSM3097125 WD-37322 normal tissue Control marker detected. Skin Biopsy of normal tissue disease state: normal; tissue: skin; tumor stage: Normal
GSM3097126 WD-37323 normal tissue Control marker detected. Skin Biopsy of normal tissue disease state: normal; tissue: skin; tumor stage: Normal

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

85 pts

Clarity: 85%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

tumor sample

49 samples

GSM3097075 S15.8147.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097076 S15.10848.A Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097077 S15.6955.A Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097078 S15.7535.A Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097079 S15.6746.A Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097080 S15.5509. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097081 S15.5295.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097082 S15.5295.B1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097083 S15.5506.A Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097084 S15.11632.B2 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097085 S15.6993.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097086 S15.11356.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097087 S15.4303.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097088 S15.4554.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097089 S15.6746.B Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097090 S15.10296. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097091 S15.9248.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIA
GSM3097092 S15.3475.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097093 S15.11632.A2 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097094 S15.4629.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097095 S15.4306.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097096 S15.4786.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097097 S15.4787.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097098 S15.5743.A Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097099 S15.5741.A6 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097100 S15.6736.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097101 S15.7535.B Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097102 S15.11580.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097103 S15.11601.A2 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097104 S15.7247.B1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097105 S15.9737.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097106 S15.9737.B1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097107 S15.5029.A Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097108 S15.5029.B Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097109 S15.11353.B1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097110 S15.12439. Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097111 S15.12438.B1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IIB
GSM3097112 S15.11076.B1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097113 S15.5743.B Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097114 S15.1874.A Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097115 S15.8957.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097116 S15.11600.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097117 S15.8104.C Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097118 S15.13213.A2 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097119 S15.6546.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097120 S15.11353.A2 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB
GSM3097121 S15.13213.B1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IVA2
GSM3097122 S16.1596.A1 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IA
GSM3097123 S16.1854.A2 Skin Biopsy of tumor/Plaque/Patch disease state: Cutaneous T-cell lymphoma; tissue: skin; tumor stage: IB

normal tissue

3 samples

GSM3097124 WD-37320 Skin Biopsy of normal tissue disease state: normal; tissue: skin; tumor stage: Normal
GSM3097125 WD-37322 Skin Biopsy of normal tissue disease state: normal; tissue: skin; tumor stage: Normal
GSM3097126 WD-37323 Skin Biopsy of normal tissue disease state: normal; tissue: skin; tumor stage: Normal

Score Breakdown

60%

relevance

Organism normalized.
Assay type normalized.
Tissue metadata normalized.

0%

comparison suitability

Tumor and normal sample groups detected.
No excluded sample type flags detected.
Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
Patient tissue or biopsy specimens boosted for tissue comparison triage.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.

85%

metadata quality

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
Group clarity: Rule-based grouping found both case and control samples.
Disease clarity: Disease or condition metadata was not normalized.
Tissue clarity: Tissue metadata normalized.
Treatment clarity: No unclear treatment split detected in the sample metadata.
Replicate clarity: No pooled sample or technical replicate flags detected.
Data availability clarity: Dataset-level processed or raw data availability is explicit.

100%

data availability

Processed data available.
Raw data available.

34%

overall

Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Sample Links

52 samples

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.