Siftome Phase 3L

GSE113617

RNA biotype-associated molecular classification in hepatitis B-related hepatocellular carcinoma

Not suitable Dataset does not meet the current suitability threshold.

Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset

Source: GEO
Search intent: Patient tissue tumor-vs-normal
Intent behavior: search-intent-behavior-v1
Submission date: 2018-04-24
Last update: 2022-04-02
Organization: Ajou University School of Medicine
Department: Not available
Public date: 2022-04-01
Experiment types: Expression profiling by high throughput sequencing
Platforms: GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Series type: Series
SubSeries: Not available
BioProject: PRJNA453401
Supplementary files: TAR: GSE113617_RAW.tar
Organism: Homo sapiens
Assay: bulk RNA-seq
Samples: 78
Study design: Tumor vs unmatched normal
Specimen/source: Tissue
Scoring version: intent-aware-scoring-v15
Ranking batch: b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created: 2026-06-05T20:20:27.088676Z
Warning version: intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism: Homo sapiens
Assay: bulk RNA-seq
Specimen/source: patient tissue or biopsy
Controls: matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters: Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules: missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps: non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts: microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs unmatched normal Tissue

Tumor samples and normal/healthy controls detected.
Tissue-like source terms detected.
Case metadata contains tumor or disease terms.
Control metadata contains normal or healthy-control terms.

Analysis Readiness

Ready after review

97% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

Review the sample grouping CSV and contrast CSV before running differential expression.
Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

No expert-review triggers were detected by Siftome.

Why This Is Ranked Here

Patient tissue tumor-vs-normal

Not suitable Dataset does not meet the current suitability threshold.

Score Components

relevance 60% Organism normalized. Assay type normalized. Tissue metadata normalized.
comparison suitability 0% Tumor and normal sample groups detected. No excluded sample type flags detected. Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
metadata quality 85% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
data availability 100% Processed data available. Raw data available.
overall 34% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Derived Classifications

Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
Study design Tumor vs unmatched normal Study design remains rule-derived: Tumor vs unmatched normal.
Specimen/source Tissue Specimen/source remains rule-derived: Tissue.
Likely case group tumor sample 68 samples
Likely control group normal tissue 10 samples

Warnings

DISEASE_LABEL_UNCLEAR warning Disease or condition label could not be normalized.

Intent Interpretation

Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
Specimen assumption patient tissue or biopsy Derived specimen/source is Tissue.
Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs unmatched normal; likely groups are tumor sample vs normal tissue.
Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Warning rules 1 active warning missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Downgrade or exclusion reason Downgraded disease context: not a colorectal/GI cancer cohort. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

Recommendation Not suitable Dataset does not meet the current suitability threshold.
Supporting fact Tumor vs unmatched normal · Tissue · suitability 0%. Contributed to match or upgrade evidence.
Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
Supporting fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to match or upgrade evidence.
Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
Supporting fact 1 warning require review. Contributed to match or upgrade evidence.
Caution fact Disease or condition label could not be normalized. Contributed to downgrade or manual-review evidence.
Caution fact Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
Caution fact Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized. Contributed to downgrade or manual-review evidence.
Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because tumor/normal grouping is from a non-colorectal cancer context. Contributed to downgrade or manual-review evidence.
Caution fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to downgrade or manual-review evidence.
Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

No active manual corrections are applied to this dataset.

Organism · Normalization rules Organism remains rule-derived: Homo sapiens.
Assay · Normalization rules Assay remains rule-derived: bulk RNA-seq.
Study design · Classifier and grouping rules Study design remains rule-derived: Tumor vs unmatched normal.
Specimen/source · Normalization rules Specimen/source remains rule-derived: Tissue.

Dataset organism

Dataset field · Organism · Global correction

Wrong organism

Current derived value

Homo sapiens

Raw GEO organism

dataset_accession: GSE113617
organism: Homo sapiens
dataset_title: RNA biotype-associated molecular classification  in hepatitis B-related hepatocellular carcinoma

Dataset assay

Dataset field · Assay · Global correction

Wrong assay

Current derived value

bulk RNA-seq

Raw GEO assay metadata

assay_type: bulk RNA-seq
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL11154 Illumina HiSeq 2000 (Homo sapiens)
dataset_title: RNA biotype-associated molecular classification  in hepatitis B-related hepatocellular carcinoma

Study design

Dataset field · Study design · Global correction

Wrong study design

Current derived value

Tumor vs unmatched normal

Raw GEO study and sample metadata

dataset_title: RNA biotype-associated molecular classification  in hepatitis B-related hepatocellular carcinoma
experiment_types: Expression profiling by high throughput sequencing
sample_context: GSM3110197: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110198: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110199: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110200: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110201: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110202: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecul
[Correction source preview truncated.]

Specimen/source type

Dataset field · Specimen/source · Global correction

Wrong specimen/source

Current derived value

Tissue

Raw GEO sample source metadata

dataset_title: RNA biotype-associated molecular classification  in hepatitis B-related hepatocellular carcinoma
sample_context: GSM3110197: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110198: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110199: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110200: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110201: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110202: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S2; disease state: HCC

Disease context

Dataset field · Disease context · Global correction

Wrong disease context

Current derived value

No disease context detected

Raw GEO disease context metadata

dataset_title: RNA biotype-associated molecular classification  in hepatitis B-related hepatocellular carcinoma
sample_context: GSM3110197: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110198: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110199: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110200: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110201: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110202: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S2; disease state: HCC

Intent exclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Exclude from intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE113617
dataset_title: RNA biotype-associated molecular classification  in hepatitis B-related hepatocellular carcinoma
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM3110197: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110198: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110199: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110200: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110201: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110202: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver;
[Correction source preview truncated.]

Intent-only inclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Include only for intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE113617
dataset_title: RNA biotype-associated molecular classification  in hepatitis B-related hepatocellular carcinoma
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM3110197: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110198: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110199: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110200: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110201: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110202: source_name=Hepatocellular carcinoma; characteristics=tissue: Liver;
[Correction source preview truncated.]

GSM3110197 grouping

Sample field · Grouping · Global correction · GSM3110197

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110197
sample_title: AJHCC003
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110197 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110197

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110197
sample_title: AJHCC003
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110198 grouping

Sample field · Grouping · Global correction · GSM3110198

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110198
sample_title: AJHCC004
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110198 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110198

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110198
sample_title: AJHCC004
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110199 grouping

Sample field · Grouping · Global correction · GSM3110199

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110199
sample_title: AJHCC005
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110199 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110199

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110199
sample_title: AJHCC005
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110200 grouping

Sample field · Grouping · Global correction · GSM3110200

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110200
sample_title: AJHCC007
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110200 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110200

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110200
sample_title: AJHCC007
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110201 grouping

Sample field · Grouping · Global correction · GSM3110201

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110201
sample_title: AJHCC009
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110201 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110201

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110201
sample_title: AJHCC009
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110202 grouping

Sample field · Grouping · Global correction · GSM3110202

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110202
sample_title: AJHCC010
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110202 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110202

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110202
sample_title: AJHCC010
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110203 grouping

Sample field · Grouping · Global correction · GSM3110203

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110203
sample_title: AJHCC012
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110203 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110203

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110203
sample_title: AJHCC012
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110204 grouping

Sample field · Grouping · Global correction · GSM3110204

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110204
sample_title: AJHCC013
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110204 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110204

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110204
sample_title: AJHCC013
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110205 grouping

Sample field · Grouping · Global correction · GSM3110205

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110205
sample_title: AJHCC014
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110205 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110205

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110205
sample_title: AJHCC014
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110206 grouping

Sample field · Grouping · Global correction · GSM3110206

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110206
sample_title: AJHCC016
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110206 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110206

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110206
sample_title: AJHCC016
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110207 grouping

Sample field · Grouping · Global correction · GSM3110207

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110207
sample_title: AJHCC017
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110207 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110207

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110207
sample_title: AJHCC017
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110208 grouping

Sample field · Grouping · Global correction · GSM3110208

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110208
sample_title: AJHCC019
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110208 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110208

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110208
sample_title: AJHCC019
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110209 grouping

Sample field · Grouping · Global correction · GSM3110209

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110209
sample_title: AJHCC020
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110209 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110209

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110209
sample_title: AJHCC020
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110210 grouping

Sample field · Grouping · Global correction · GSM3110210

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110210
sample_title: AJHCC025
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110210 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110210

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110210
sample_title: AJHCC025
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110211 grouping

Sample field · Grouping · Global correction · GSM3110211

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110211
sample_title: AJHCC026
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110211 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110211

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110211
sample_title: AJHCC026
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110212 grouping

Sample field · Grouping · Global correction · GSM3110212

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110212
sample_title: AJHCC027
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110212 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110212

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110212
sample_title: AJHCC027
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110213 grouping

Sample field · Grouping · Global correction · GSM3110213

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110213
sample_title: AJHCC028
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110213 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110213

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110213
sample_title: AJHCC028
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110214 grouping

Sample field · Grouping · Global correction · GSM3110214

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110214
sample_title: AJHCC029
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110214 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110214

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110214
sample_title: AJHCC029
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110215 grouping

Sample field · Grouping · Global correction · GSM3110215

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110215
sample_title: AJHCC030
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110215 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110215

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110215
sample_title: AJHCC030
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110216 grouping

Sample field · Grouping · Global correction · GSM3110216

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110216
sample_title: AJHCC031
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110216 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110216

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110216
sample_title: AJHCC031
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110217 grouping

Sample field · Grouping · Global correction · GSM3110217

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110217
sample_title: AJHCC033
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110217 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110217

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110217
sample_title: AJHCC033
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110218 grouping

Sample field · Grouping · Global correction · GSM3110218

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110218
sample_title: AJHCC034
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110218 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110218

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110218
sample_title: AJHCC034
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110219 grouping

Sample field · Grouping · Global correction · GSM3110219

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110219
sample_title: AJHCC036
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110219 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110219

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110219
sample_title: AJHCC036
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110220 grouping

Sample field · Grouping · Global correction · GSM3110220

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110220
sample_title: AJHCC038
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110220 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110220

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110220
sample_title: AJHCC038
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110221 grouping

Sample field · Grouping · Global correction · GSM3110221

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110221
sample_title: AJHCC039
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110221 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110221

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110221
sample_title: AJHCC039
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110222 grouping

Sample field · Grouping · Global correction · GSM3110222

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110222
sample_title: AJHCC040
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110222 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110222

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110222
sample_title: AJHCC040
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110223 grouping

Sample field · Grouping · Global correction · GSM3110223

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110223
sample_title: AJHCC041
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110223 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110223

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110223
sample_title: AJHCC041
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110224 grouping

Sample field · Grouping · Global correction · GSM3110224

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110224
sample_title: AJHCC042
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110224 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110224

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110224
sample_title: AJHCC042
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110225 grouping

Sample field · Grouping · Global correction · GSM3110225

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110225
sample_title: AJHCC043
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110225 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110225

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110225
sample_title: AJHCC043
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110226 grouping

Sample field · Grouping · Global correction · GSM3110226

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110226
sample_title: AJHCC044
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110226 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110226

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110226
sample_title: AJHCC044
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110227 grouping

Sample field · Grouping · Global correction · GSM3110227

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110227
sample_title: AJHCC046
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110227 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110227

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110227
sample_title: AJHCC046
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110228 grouping

Sample field · Grouping · Global correction · GSM3110228

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110228
sample_title: AJHCC048
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110228 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110228

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110228
sample_title: AJHCC048
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110229 grouping

Sample field · Grouping · Global correction · GSM3110229

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110229
sample_title: AJHCC050
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110229 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110229

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110229
sample_title: AJHCC050
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110230 grouping

Sample field · Grouping · Global correction · GSM3110230

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110230
sample_title: AJHCC051
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110230 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110230

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110230
sample_title: AJHCC051
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110231 grouping

Sample field · Grouping · Global correction · GSM3110231

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110231
sample_title: AJHCC052
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110231 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110231

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110231
sample_title: AJHCC052
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110232 grouping

Sample field · Grouping · Global correction · GSM3110232

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110232
sample_title: AJHCC053
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110232 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110232

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110232
sample_title: AJHCC053
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110233 grouping

Sample field · Grouping · Global correction · GSM3110233

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110233
sample_title: AJHCC054
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110233 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110233

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110233
sample_title: AJHCC054
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110234 grouping

Sample field · Grouping · Global correction · GSM3110234

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110234
sample_title: AJHCC056
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110234 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110234

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110234
sample_title: AJHCC056
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110235 grouping

Sample field · Grouping · Global correction · GSM3110235

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110235
sample_title: AJHCC057
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110235 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110235

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110235
sample_title: AJHCC057
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110236 grouping

Sample field · Grouping · Global correction · GSM3110236

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110236
sample_title: AJHCC058
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110236 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110236

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110236
sample_title: AJHCC058
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110237 grouping

Sample field · Grouping · Global correction · GSM3110237

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110237
sample_title: AJHCC059
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110237 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110237

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110237
sample_title: AJHCC059
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110238 grouping

Sample field · Grouping · Global correction · GSM3110238

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110238
sample_title: AJHCC060
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110238 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110238

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110238
sample_title: AJHCC060
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110239 grouping

Sample field · Grouping · Global correction · GSM3110239

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110239
sample_title: AJHCC061
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110239 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110239

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110239
sample_title: AJHCC061
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110240 grouping

Sample field · Grouping · Global correction · GSM3110240

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110240
sample_title: AJHCC062
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110240 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110240

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110240
sample_title: AJHCC062
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110241 grouping

Sample field · Grouping · Global correction · GSM3110241

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110241
sample_title: AJHCC063
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110241 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110241

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110241
sample_title: AJHCC063
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110242 grouping

Sample field · Grouping · Global correction · GSM3110242

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110242
sample_title: AJHCC064
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110242 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110242

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110242
sample_title: AJHCC064
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110243 grouping

Sample field · Grouping · Global correction · GSM3110243

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110243
sample_title: AJHCC065
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110243 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110243

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110243
sample_title: AJHCC065
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110244 grouping

Sample field · Grouping · Global correction · GSM3110244

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110244
sample_title: AJHCC066
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110244 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110244

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110244
sample_title: AJHCC066
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110245 grouping

Sample field · Grouping · Global correction · GSM3110245

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110245
sample_title: AJHCC067
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110245 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110245

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110245
sample_title: AJHCC067
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110246 grouping

Sample field · Grouping · Global correction · GSM3110246

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110246
sample_title: AJHCC068
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110246 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110246

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110246
sample_title: AJHCC068
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110247 grouping

Sample field · Grouping · Global correction · GSM3110247

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110247
sample_title: AJHCC070
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110247 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110247

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110247
sample_title: AJHCC070
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110248 grouping

Sample field · Grouping · Global correction · GSM3110248

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110248
sample_title: AJHCC072
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110248 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110248

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110248
sample_title: AJHCC072
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110249 grouping

Sample field · Grouping · Global correction · GSM3110249

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110249
sample_title: AJHCC073
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110249 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110249

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110249
sample_title: AJHCC073
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110250 grouping

Sample field · Grouping · Global correction · GSM3110250

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110250
sample_title: AJHCC074
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110250 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110250

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110250
sample_title: AJHCC074
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110251 grouping

Sample field · Grouping · Global correction · GSM3110251

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110251
sample_title: AJHCC075
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110251 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110251

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110251
sample_title: AJHCC075
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110252 grouping

Sample field · Grouping · Global correction · GSM3110252

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110252
sample_title: AJHCC076
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110252 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110252

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110252
sample_title: AJHCC076
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110253 grouping

Sample field · Grouping · Global correction · GSM3110253

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110253
sample_title: AJHCC078
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110253 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110253

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110253
sample_title: AJHCC078
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110254 grouping

Sample field · Grouping · Global correction · GSM3110254

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110254
sample_title: AJHCC079
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110254 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110254

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110254
sample_title: AJHCC079
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110255 grouping

Sample field · Grouping · Global correction · GSM3110255

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110255
sample_title: AJHCC080
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110255 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110255

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110255
sample_title: AJHCC080
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110256 grouping

Sample field · Grouping · Global correction · GSM3110256

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110256
sample_title: AJHCC081
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110256 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110256

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110256
sample_title: AJHCC081
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110257 grouping

Sample field · Grouping · Global correction · GSM3110257

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110257
sample_title: AJHCC082
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110257 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110257

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110257
sample_title: AJHCC082
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110258 grouping

Sample field · Grouping · Global correction · GSM3110258

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110258
sample_title: AJHCC094
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110258 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110258

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110258
sample_title: AJHCC094
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110259 grouping

Sample field · Grouping · Global correction · GSM3110259

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110259
sample_title: AJHCC095
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110259 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110259

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110259
sample_title: AJHCC095
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110260 grouping

Sample field · Grouping · Global correction · GSM3110260

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110260
sample_title: AJHCC096
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110260 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110260

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110260
sample_title: AJHCC096
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC

GSM3110261 grouping

Sample field · Grouping · Global correction · GSM3110261

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110261
sample_title: AJHCC097
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110261 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110261

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110261
sample_title: AJHCC097
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC

GSM3110262 grouping

Sample field · Grouping · Global correction · GSM3110262

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110262
sample_title: AJHCC098
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110262 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110262

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110262
sample_title: AJHCC098
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110263 grouping

Sample field · Grouping · Global correction · GSM3110263

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110263
sample_title: AJHCC099
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110263 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110263

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110263
sample_title: AJHCC099
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC

GSM3110264 grouping

Sample field · Grouping · Global correction · GSM3110264

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3110264
sample_title: AJHCC100
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110264 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110264

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3110264
sample_title: AJHCC100
source_name: Hepatocellular carcinoma
characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC

GSM3110265 grouping

Sample field · Grouping · Global correction · GSM3110265

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110265
sample_title: AJNT038
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110265 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110265

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110265
sample_title: AJNT038
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110266 grouping

Sample field · Grouping · Global correction · GSM3110266

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110266
sample_title: AJNT039
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110266 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110266

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110266
sample_title: AJNT039
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110267 grouping

Sample field · Grouping · Global correction · GSM3110267

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110267
sample_title: AJNT040
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110267 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110267

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110267
sample_title: AJNT040
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110268 grouping

Sample field · Grouping · Global correction · GSM3110268

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110268
sample_title: AJNT048
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110268 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110268

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110268
sample_title: AJNT048
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110269 grouping

Sample field · Grouping · Global correction · GSM3110269

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110269
sample_title: AJNT052
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110269 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110269

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110269
sample_title: AJNT052
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110270 grouping

Sample field · Grouping · Global correction · GSM3110270

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110270
sample_title: AJNT079
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110270 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110270

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110270
sample_title: AJNT079
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110271 grouping

Sample field · Grouping · Global correction · GSM3110271

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110271
sample_title: AJNT080
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110271 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110271

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110271
sample_title: AJNT080
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110272 grouping

Sample field · Grouping · Global correction · GSM3110272

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110272
sample_title: AJNT081
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110272 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110272

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110272
sample_title: AJNT081
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110273 grouping

Sample field · Grouping · Global correction · GSM3110273

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110273
sample_title: AJNT098
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110273 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110273

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110273
sample_title: AJNT098
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110274 grouping

Sample field · Grouping · Global correction · GSM3110274

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3110274
sample_title: AJNT100
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

GSM3110274 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3110274

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3110274
sample_title: AJNT100
source_name: Non-tumor
characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession: GSE113617
Sample records: 78 GSM samples

GEO has priority for original metadata under the Phase 3J source rules.
Processed data: available.
Raw data: available.
No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession: GSE113617

No recount3 project identifier has been imported for this dataset.
Once imported, recount3 has priority for processed count availability.
The recount3 source filter excludes this dataset until that linkage exists.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession: GSE113617

No Expression Atlas experiment identifier has been imported for this dataset.
Once imported, Expression Atlas has priority for curated expression experiment links.
The Expression Atlas source filter excludes this dataset until that linkage exists.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession: GSE113617

No PubMed identifier is present in the current runtime metadata.
No live PubMed search is performed from the dataset detail page.

Dataset Feedback

0 stored

No project feedback stored for this dataset.

Original GEO Metadata

dataset_accession: GSE113617
dataset_title: RNA biotype-associated molecular classification  in hepatitis B-related hepatocellular carcinoma
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2018-04-24
last_update_date: 2022-04-02
organization_name: Ajou University School of Medicine
department: Not available
public_date: 2022-04-01
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL11154 Illumina HiSeq 2000 (Homo sapiens)
sub_series: Not available
bioproject: PRJNA453401
supplementary_files: TAR: GSE113617_RAW.tar
series_type: Series

Why It Matched

Tumor vs unmatched normal · Tissue · suitability 0%.
Prioritized assay: bulk RNA-seq is the active assay expectation.
Downgraded disease context: not a colorectal/GI cancer cohort.
Processed data is available for downstream review.
1 warning require review.

Why It May Not Be Suitable

Disease or condition label could not be normalized.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized.
Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.
Downgraded disease context: not a colorectal/GI cancer cohort.
Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

warning DISEASE_LABEL_UNCLEAR Disease or condition label could not be normalized.

Normalized Fields

158 fields

Field Value Source Origin Confidence Evidence Reason

assay_type bulk RNA-seq dataset GSE113617 Runtime Siftome inference GEO:dataset:GSE113617:11c8a1d370f1c43f8a689fae847dfdad05f3e25e6f0a0744d12114f596d2eaef high confidence bulk rna-seq dataset_accession: GSE113617 dataset_title: RNA biotype-associated molecular classification in hepatitis B-related hepatocellular carcinoma organism: Homo sapiens assay_type: bu... keyword match keyword match: bulk rna-seq

organism Homo sapiens dataset GSE113617 Runtime Siftome inference GEO:dataset:GSE113617:11c8a1d370f1c43f8a689fae847dfdad05f3e25e6f0a0744d12114f596d2eaef high confidence homo sapiens dataset_accession: GSE113617 dataset_title: RNA biotype-associated molecular classification in hepatitis B-related hepatocellular carcinoma organism: Homo sapiens assay_type: bu... keyword match keyword match: homo sapiens

sample_type tumor sample sample GSM3110197 Runtime Siftome inference GEO:sample:GSM3110197:52a521b26b626eaaa625cc5c52fba56b0c76ffea1da6beba960bdf0cd8f86ed9 medium confidence carcinoma sample_accession: GSM3110197 sample_title: AJHCC003 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC003 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110198 Runtime Siftome inference GEO:sample:GSM3110198:e7384ee66996bd3726e3b665f801403804ec71a195e4771638d4963f155a1c5a medium confidence carcinoma sample_accession: GSM3110198 sample_title: AJHCC004 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC004 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110199 Runtime Siftome inference GEO:sample:GSM3110199:e36dfa7363ab78d150672ce408510b16802b0541d4741b4b9ff69de547c5b07c medium confidence carcinoma sample_accession: GSM3110199 sample_title: AJHCC005 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC005 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110200 Runtime Siftome inference GEO:sample:GSM3110200:6776c36e813437683c852cdd23225372723caff9f9a6d05518232fb4d4df69cf medium confidence carcinoma sample_accession: GSM3110200 sample_title: AJHCC007 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC007 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110201 Runtime Siftome inference GEO:sample:GSM3110201:a84bbd3e4266acac1360ed837e377b9416e7f02fd3dd9226df64b5d7aa931267 medium confidence carcinoma sample_accession: GSM3110201 sample_title: AJHCC009 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC009 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110202 Runtime Siftome inference GEO:sample:GSM3110202:378a258fc59dbd4cd12fcbf2d84dd42c492f5a8a089c1b2a0ca98a533d6ba18d medium confidence carcinoma sample_accession: GSM3110202 sample_title: AJHCC010 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC010 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110203 Runtime Siftome inference GEO:sample:GSM3110203:4a44681f5dc332f0ef15d97391d16d76e93a1b9647f8effeb973e13dc1a10861 medium confidence carcinoma sample_accession: GSM3110203 sample_title: AJHCC012 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC012 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110204 Runtime Siftome inference GEO:sample:GSM3110204:7e6d77aefca6b95cdaf9776e12c316675e1d747942bb97ae5932550d5f9e46ae medium confidence carcinoma sample_accession: GSM3110204 sample_title: AJHCC013 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC013 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110205 Runtime Siftome inference GEO:sample:GSM3110205:63ed73bb25a376ef7eacb5c8e682c187ad3a5378fba6fba7fd8ced727b6e0cab medium confidence carcinoma sample_accession: GSM3110205 sample_title: AJHCC014 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC014 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110206 Runtime Siftome inference GEO:sample:GSM3110206:4de8b9fe82983661bd8acac23492d822a9dbda3bd399ea013c05fbcdc705cb1a medium confidence carcinoma sample_accession: GSM3110206 sample_title: AJHCC016 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC016 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110207 Runtime Siftome inference GEO:sample:GSM3110207:5c45fa472a02e7ab0ee82950d9db07ee7d850db9aa6e1d8489f1c683feb30caa medium confidence carcinoma sample_accession: GSM3110207 sample_title: AJHCC017 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC017 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110208 Runtime Siftome inference GEO:sample:GSM3110208:2ac2cc5b5eccb0c24b7e1523b1088f5727727405a0b3f8ba1b412619f7e063ef medium confidence carcinoma sample_accession: GSM3110208 sample_title: AJHCC019 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC019 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110209 Runtime Siftome inference GEO:sample:GSM3110209:ff744604fd6cda42be5284cbf11f9aee47a754ae35b5a1783f611c6ba442574b medium confidence carcinoma sample_accession: GSM3110209 sample_title: AJHCC020 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC020 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110210 Runtime Siftome inference GEO:sample:GSM3110210:14e8c34f39d748fa654753e8f26a441121bedbc4180f02ca6dcb7602952538f7 medium confidence carcinoma sample_accession: GSM3110210 sample_title: AJHCC025 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC025 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110211 Runtime Siftome inference GEO:sample:GSM3110211:aa78b123ea1e39f7174b578766fb4a3511e87c16cc85aed7b34fe08acb00629c medium confidence carcinoma sample_accession: GSM3110211 sample_title: AJHCC026 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC026 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110212 Runtime Siftome inference GEO:sample:GSM3110212:d401741357cc365c38a08c9754e104fa5391be95685034e038bef13ee9cd90e2 medium confidence carcinoma sample_accession: GSM3110212 sample_title: AJHCC027 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC027 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110213 Runtime Siftome inference GEO:sample:GSM3110213:1ef1954e34e08ce19569b4186873910f9daf40234384b929a77595ef90179418 medium confidence carcinoma sample_accession: GSM3110213 sample_title: AJHCC028 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC028 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110214 Runtime Siftome inference GEO:sample:GSM3110214:2c3f7c6b88690b63ef135625e992c1cf372635c5b7587068602853ea702730c3 medium confidence carcinoma sample_accession: GSM3110214 sample_title: AJHCC029 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC029 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110215 Runtime Siftome inference GEO:sample:GSM3110215:108dffbcfada497ec371375b203f28221814c03ff63d0d562d3fb2c8da807ec5 medium confidence carcinoma sample_accession: GSM3110215 sample_title: AJHCC030 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC030 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110216 Runtime Siftome inference GEO:sample:GSM3110216:a83d79cb953a42593509db3305a79b6cbb495ec9c023ab34c7999bfe7c4c42e0 medium confidence carcinoma sample_accession: GSM3110216 sample_title: AJHCC031 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC031 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110217 Runtime Siftome inference GEO:sample:GSM3110217:e065307abbf19a47819f011ae1d1186fe43b0322432e1bb852a636bb7a440b94 medium confidence carcinoma sample_accession: GSM3110217 sample_title: AJHCC033 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC033 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110218 Runtime Siftome inference GEO:sample:GSM3110218:d81ad7423609f89632be51a7fd6d32b5975d4016b77e6da78425994ae71f42e6 medium confidence carcinoma sample_accession: GSM3110218 sample_title: AJHCC034 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC034 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110219 Runtime Siftome inference GEO:sample:GSM3110219:84a9b1b3e49e616fc00a8c19fdc027b7c8d6f7e8b7975ab40f3f5a858d1dc9f6 medium confidence carcinoma sample_accession: GSM3110219 sample_title: AJHCC036 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC036 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110220 Runtime Siftome inference GEO:sample:GSM3110220:adf019e004402fa75de394ce946b2353405ad485223518f615fa5ac0da4759b9 medium confidence carcinoma sample_accession: GSM3110220 sample_title: AJHCC038 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC038 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110221 Runtime Siftome inference GEO:sample:GSM3110221:3896bfa12293eeebc8bcddab5d1ba9a17231eef8c99a5515868e3c58faa79cde medium confidence carcinoma sample_accession: GSM3110221 sample_title: AJHCC039 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC039 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110222 Runtime Siftome inference GEO:sample:GSM3110222:c4f3f37bb404bae637dc6f65f8f9dad837b644a83ba1e3ae1e27bcbe18dac4f4 medium confidence carcinoma sample_accession: GSM3110222 sample_title: AJHCC040 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC040 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110223 Runtime Siftome inference GEO:sample:GSM3110223:bc4d39f51b7d09f8b8dcc2096aaf2ec203f18b17fe756d40e5fdf385de6551e1 medium confidence carcinoma sample_accession: GSM3110223 sample_title: AJHCC041 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC041 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110224 Runtime Siftome inference GEO:sample:GSM3110224:cf4a00ae55ddb9e24c44b45a6c86082243a67e751e2ef86af6c6c6a4f33e5c8d medium confidence carcinoma sample_accession: GSM3110224 sample_title: AJHCC042 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC042 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110225 Runtime Siftome inference GEO:sample:GSM3110225:7dba3976a4c260eee271c25d54f4bf5aa29c9c938ed171f99a64524cbc07fa72 medium confidence carcinoma sample_accession: GSM3110225 sample_title: AJHCC043 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC043 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110226 Runtime Siftome inference GEO:sample:GSM3110226:443edd944c4b6398fa45d77c19557dcceb77e9e5af1e738de02c7489ef0cc6f0 medium confidence carcinoma sample_accession: GSM3110226 sample_title: AJHCC044 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC044 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110227 Runtime Siftome inference GEO:sample:GSM3110227:7cfeb39add40304edcfef1ef0ddf79c4408cab8621d9c3416d80a9473b5884be medium confidence carcinoma sample_accession: GSM3110227 sample_title: AJHCC046 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC046 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110228 Runtime Siftome inference GEO:sample:GSM3110228:e253a9e25fdb7b7c20df31ac505655c86ba9370ca64e1388dd0d48905ce5344b medium confidence carcinoma sample_accession: GSM3110228 sample_title: AJHCC048 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC048 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110229 Runtime Siftome inference GEO:sample:GSM3110229:9e6d3a66e090e6bf1ca0b6b341cc9a29d2fc11f0dc8f12949e2dbbca8c4ac957 medium confidence carcinoma sample_accession: GSM3110229 sample_title: AJHCC050 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC050 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110230 Runtime Siftome inference GEO:sample:GSM3110230:eceaf1f79d83346f8bf258f772ac4410369ff3ddec94ab7ee7e2e988421e09d3 medium confidence carcinoma sample_accession: GSM3110230 sample_title: AJHCC051 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC051 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110231 Runtime Siftome inference GEO:sample:GSM3110231:7d6fe2aae3b6e387577b3bc4a9f7c21b9a337450977d383db4a72f0e740da8ba medium confidence carcinoma sample_accession: GSM3110231 sample_title: AJHCC052 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC052 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110232 Runtime Siftome inference GEO:sample:GSM3110232:cf1475c668bd465f9b53f8a4f7c1f1d9031853b0b3405ddd6c16825fc4b85fa4 medium confidence carcinoma sample_accession: GSM3110232 sample_title: AJHCC053 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC053 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110233 Runtime Siftome inference GEO:sample:GSM3110233:606a9ed8c53a457d57df4b69c5086bdca60ca0d1efa150371a1772918a3a2b8f medium confidence carcinoma sample_accession: GSM3110233 sample_title: AJHCC054 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC054 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110234 Runtime Siftome inference GEO:sample:GSM3110234:2fb5dfa65df54719fdd8633ad0a0e75d30c471925198df6d5dc0e237eae28970 medium confidence carcinoma sample_accession: GSM3110234 sample_title: AJHCC056 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC056 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110235 Runtime Siftome inference GEO:sample:GSM3110235:16d15c64b4f1b492fe65f399caf34b54910b9dca6d5bb9c3646fbd2d12ad2c6e medium confidence carcinoma sample_accession: GSM3110235 sample_title: AJHCC057 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC057 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110236 Runtime Siftome inference GEO:sample:GSM3110236:371775f680c3dea8723d5bdb7a47af9cd1763a37043d788eafa2f666f7a96a18 medium confidence carcinoma sample_accession: GSM3110236 sample_title: AJHCC058 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC058 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110237 Runtime Siftome inference GEO:sample:GSM3110237:9632313638d22d45fbabc906d53d197538203915c9a10be8f2c67f8b0905d56a medium confidence carcinoma sample_accession: GSM3110237 sample_title: AJHCC059 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC059 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110238 Runtime Siftome inference GEO:sample:GSM3110238:7fabac7c8e9fc4b39a2e67150b680a5c4d053ecb2d3fe0c7b448cd426f1e4581 medium confidence carcinoma sample_accession: GSM3110238 sample_title: AJHCC060 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC060 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110239 Runtime Siftome inference GEO:sample:GSM3110239:a52905c7480ed83b9cb2f40e08960afa732fad07800f5563d5de960657e65386 medium confidence carcinoma sample_accession: GSM3110239 sample_title: AJHCC061 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC061 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110240 Runtime Siftome inference GEO:sample:GSM3110240:b644d3fd0d1def941f235290aabdbc6af264ae51c22bd67c6b6379990a9f1012 medium confidence carcinoma sample_accession: GSM3110240 sample_title: AJHCC062 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC062 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110241 Runtime Siftome inference GEO:sample:GSM3110241:465da2e19e5f6c0afa24d6b314449f74ac5eeed22358ac8d118362e6e17b8d25 medium confidence carcinoma sample_accession: GSM3110241 sample_title: AJHCC063 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC063 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110242 Runtime Siftome inference GEO:sample:GSM3110242:662b3d911c08e319fb645ef97ad393ef66d720ecb19af54371ebfe132d1c4873 medium confidence carcinoma sample_accession: GSM3110242 sample_title: AJHCC064 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC064 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110243 Runtime Siftome inference GEO:sample:GSM3110243:04bea5137dec0e0783672bb0ea6cc3db2c476548acda90c816dc56a71b8ee24a medium confidence carcinoma sample_accession: GSM3110243 sample_title: AJHCC065 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC065 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110244 Runtime Siftome inference GEO:sample:GSM3110244:d4168901e2ea3eecca0fb2f5245be731580a5adc6a5a11c12cb7695e1050eeaa medium confidence carcinoma sample_accession: GSM3110244 sample_title: AJHCC066 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC066 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110245 Runtime Siftome inference GEO:sample:GSM3110245:550a91a517511538bc94eaaeb4e914ee87bff90f8e34979cf74441acac8d0a8a medium confidence carcinoma sample_accession: GSM3110245 sample_title: AJHCC067 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC067 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110246 Runtime Siftome inference GEO:sample:GSM3110246:668715a352b0d2f1b102202f07cc708b54ea7a49b9c1c312fd8c36c2cb42aa98 medium confidence carcinoma sample_accession: GSM3110246 sample_title: AJHCC068 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC068 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110247 Runtime Siftome inference GEO:sample:GSM3110247:457c01a0b6e23f939b119708c032304f3ef5b61dadee9bf1a3172a1989d3e6eb medium confidence carcinoma sample_accession: GSM3110247 sample_title: AJHCC070 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC070 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110248 Runtime Siftome inference GEO:sample:GSM3110248:d96223e230e1b08dd6a26fedcba1c339627bd41203a75124b0b1739b53a1926e medium confidence carcinoma sample_accession: GSM3110248 sample_title: AJHCC072 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC072 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110249 Runtime Siftome inference GEO:sample:GSM3110249:0515ca60f45481dc90244924cb4104bfac8a52867d140ef4f24a0a293fd17ead medium confidence carcinoma sample_accession: GSM3110249 sample_title: AJHCC073 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC073 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110250 Runtime Siftome inference GEO:sample:GSM3110250:697f14a444c317a52fb14af9f62c2875027230cc3df73f2cfcbd0c0d9b11c180 medium confidence carcinoma sample_accession: GSM3110250 sample_title: AJHCC074 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC074 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110251 Runtime Siftome inference GEO:sample:GSM3110251:08215452f2d78b92505724ae0875cc60e1cf2fe883e9436a3dc61d522b21346f medium confidence carcinoma sample_accession: GSM3110251 sample_title: AJHCC075 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC075 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110252 Runtime Siftome inference GEO:sample:GSM3110252:48071d19c7b661c6a28d16ae0d46795bb96bfd56f109cc88ab92e33abae4cc76 medium confidence carcinoma sample_accession: GSM3110252 sample_title: AJHCC076 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC076 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110253 Runtime Siftome inference GEO:sample:GSM3110253:b6add110a168fe81a9f90ad032c6b5f4f71b54a3b9ee1a04d3b2bc43330ce00f medium confidence carcinoma sample_accession: GSM3110253 sample_title: AJHCC078 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC078 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110254 Runtime Siftome inference GEO:sample:GSM3110254:39722e6c68d59bb30c9595b56f10a0539267ac2e9197acf6e209968634db7936 medium confidence carcinoma sample_accession: GSM3110254 sample_title: AJHCC079 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC079 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110255 Runtime Siftome inference GEO:sample:GSM3110255:0177bcb4cddc894735c49c4fb73e691145ec6c286f8754b99c08f1f5974ed8be medium confidence carcinoma sample_accession: GSM3110255 sample_title: AJHCC080 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC080 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110256 Runtime Siftome inference GEO:sample:GSM3110256:5d5a77dd00b90c02d0748cd88b9b26b95057d5eebc81b7b6ab0fba38d7b7c367 medium confidence carcinoma sample_accession: GSM3110256 sample_title: AJHCC081 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC081 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110257 Runtime Siftome inference GEO:sample:GSM3110257:b7695d34019069ed4ce99e6c44f7b4b6c9218437b8cb179cc67778a15dcef386 medium confidence carcinoma sample_accession: GSM3110257 sample_title: AJHCC082 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC082 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110258 Runtime Siftome inference GEO:sample:GSM3110258:959e5dcd123ed768bc90d8a6c19439d5958a6f5771169c6d0e24d1a0f0bd1386 medium confidence carcinoma sample_accession: GSM3110258 sample_title: AJHCC094 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC094 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110259 Runtime Siftome inference GEO:sample:GSM3110259:a306663c85c0ea6c2cd813258b2008fa869aa57c8f92f36d996520e2fe4d8baf medium confidence carcinoma sample_accession: GSM3110259 sample_title: AJHCC095 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC095 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110260 Runtime Siftome inference GEO:sample:GSM3110260:cff8b7c6f95239094133cfcebdeb1e1fbfc81426f58442a05b67f96a9fc0b09a medium confidence carcinoma sample_accession: GSM3110260 sample_title: AJHCC096 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC096 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110261 Runtime Siftome inference GEO:sample:GSM3110261:d24114de1e3d88fc86ca58b8c2729bf47eb7e8db945c4c57086093f32a5fcf55 medium confidence carcinoma sample_accession: GSM3110261 sample_title: AJHCC097 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC097 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110262 Runtime Siftome inference GEO:sample:GSM3110262:cd93f7c13bcc1e1074fde584721b8a0e79e54f45f93ec5e29ac7954243b4cf07 medium confidence carcinoma sample_accession: GSM3110262 sample_title: AJHCC098 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC098 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110263 Runtime Siftome inference GEO:sample:GSM3110263:5d33bc58f073922d11cab8bd1504e6349bd0e3d51242b85108020a64eb123c4a medium confidence carcinoma sample_accession: GSM3110263 sample_title: AJHCC099 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC099 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3110264 Runtime Siftome inference GEO:sample:GSM3110264:5d854e89820e6626b929a88b849d4414e1c7f98d918aea2e59ca3f3434513c61 medium confidence carcinoma sample_accession: GSM3110264 sample_title: AJHCC100 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC100 controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type normal tissue sample GSM3110265 Runtime Siftome inference GEO:sample:GSM3110265:728ad95752e61529a1ec61b837fb6a2509cf053368e31bb45b90fc81537d7247 medium confidence non-tumor sample_accession: GSM3110265 sample_title: AJNT038 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT038 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110266 Runtime Siftome inference GEO:sample:GSM3110266:6bea77b95e43e23ecd8e16ad92f92bc1170e729f5ee99d54063c9f56723cac45 medium confidence non-tumor sample_accession: GSM3110266 sample_title: AJNT039 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT039 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110267 Runtime Siftome inference GEO:sample:GSM3110267:46e97a98fae00b51cd6d1d7a9ea29d22a1ac89622613d291602cb88f061e05fd medium confidence non-tumor sample_accession: GSM3110267 sample_title: AJNT040 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT040 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110268 Runtime Siftome inference GEO:sample:GSM3110268:3a29aed88efc191b99ce58ff62b7f10d14739c46524bdcdc3e6acb71e22e54a4 medium confidence non-tumor sample_accession: GSM3110268 sample_title: AJNT048 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT048 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110269 Runtime Siftome inference GEO:sample:GSM3110269:99c197fe7ea2a6d53db8d69c7ff1e20cb63bb1fbed39d03a3611055e2910ce27 medium confidence non-tumor sample_accession: GSM3110269 sample_title: AJNT052 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT052 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110270 Runtime Siftome inference GEO:sample:GSM3110270:7b1dcf0d1ed237704a5146eaed2a568d026ee1175fa3c287ab4e8284ed37529e medium confidence non-tumor sample_accession: GSM3110270 sample_title: AJNT079 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT079 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110271 Runtime Siftome inference GEO:sample:GSM3110271:e418e47ba14aefdf4c6dd2783566468902d61b45600657e3bdfcfe344baabee7 medium confidence non-tumor sample_accession: GSM3110271 sample_title: AJNT080 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT080 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110272 Runtime Siftome inference GEO:sample:GSM3110272:223079c9f35d068034ff39ae57684125b0f1d521e560914311f58176c771c988 medium confidence non-tumor sample_accession: GSM3110272 sample_title: AJNT081 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT081 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110273 Runtime Siftome inference GEO:sample:GSM3110273:cdaddb653f6119e6e877a3cecad2f262fa9e668bbea11fd098a4aa7fa42facdd medium confidence non-tumor sample_accession: GSM3110273 sample_title: AJNT098 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT098 controlled vocabulary controlled vocabulary sample type match: non-tumor

sample_type normal tissue sample GSM3110274 Runtime Siftome inference GEO:sample:GSM3110274:80afce56204252f63788f4f7cd6454dbf1750755f7d27c5d72367fdeef3671e7 medium confidence non-tumor sample_accession: GSM3110274 sample_title: AJNT100 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT100 controlled vocabulary controlled vocabulary sample type match: non-tumor

tissue liver sample GSM3110197 Runtime Siftome inference GEO:sample:GSM3110197:52a521b26b626eaaa625cc5c52fba56b0c76ffea1da6beba960bdf0cd8f86ed9 low confidence liver sample_accession: GSM3110197 sample_title: AJHCC003 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC003 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110198 Runtime Siftome inference GEO:sample:GSM3110198:e7384ee66996bd3726e3b665f801403804ec71a195e4771638d4963f155a1c5a low confidence liver sample_accession: GSM3110198 sample_title: AJHCC004 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC004 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110199 Runtime Siftome inference GEO:sample:GSM3110199:e36dfa7363ab78d150672ce408510b16802b0541d4741b4b9ff69de547c5b07c low confidence liver sample_accession: GSM3110199 sample_title: AJHCC005 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC005 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110200 Runtime Siftome inference GEO:sample:GSM3110200:6776c36e813437683c852cdd23225372723caff9f9a6d05518232fb4d4df69cf low confidence liver sample_accession: GSM3110200 sample_title: AJHCC007 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC007 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110201 Runtime Siftome inference GEO:sample:GSM3110201:a84bbd3e4266acac1360ed837e377b9416e7f02fd3dd9226df64b5d7aa931267 low confidence liver sample_accession: GSM3110201 sample_title: AJHCC009 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC009 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110202 Runtime Siftome inference GEO:sample:GSM3110202:378a258fc59dbd4cd12fcbf2d84dd42c492f5a8a089c1b2a0ca98a533d6ba18d low confidence liver sample_accession: GSM3110202 sample_title: AJHCC010 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC010 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110203 Runtime Siftome inference GEO:sample:GSM3110203:4a44681f5dc332f0ef15d97391d16d76e93a1b9647f8effeb973e13dc1a10861 low confidence liver sample_accession: GSM3110203 sample_title: AJHCC012 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC012 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110204 Runtime Siftome inference GEO:sample:GSM3110204:7e6d77aefca6b95cdaf9776e12c316675e1d747942bb97ae5932550d5f9e46ae low confidence liver sample_accession: GSM3110204 sample_title: AJHCC013 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC013 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110205 Runtime Siftome inference GEO:sample:GSM3110205:63ed73bb25a376ef7eacb5c8e682c187ad3a5378fba6fba7fd8ced727b6e0cab low confidence liver sample_accession: GSM3110205 sample_title: AJHCC014 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC014 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110206 Runtime Siftome inference GEO:sample:GSM3110206:4de8b9fe82983661bd8acac23492d822a9dbda3bd399ea013c05fbcdc705cb1a low confidence liver sample_accession: GSM3110206 sample_title: AJHCC016 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC016 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110207 Runtime Siftome inference GEO:sample:GSM3110207:5c45fa472a02e7ab0ee82950d9db07ee7d850db9aa6e1d8489f1c683feb30caa low confidence liver sample_accession: GSM3110207 sample_title: AJHCC017 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC017 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110208 Runtime Siftome inference GEO:sample:GSM3110208:2ac2cc5b5eccb0c24b7e1523b1088f5727727405a0b3f8ba1b412619f7e063ef low confidence liver sample_accession: GSM3110208 sample_title: AJHCC019 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC019 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110209 Runtime Siftome inference GEO:sample:GSM3110209:ff744604fd6cda42be5284cbf11f9aee47a754ae35b5a1783f611c6ba442574b low confidence liver sample_accession: GSM3110209 sample_title: AJHCC020 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC020 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110210 Runtime Siftome inference GEO:sample:GSM3110210:14e8c34f39d748fa654753e8f26a441121bedbc4180f02ca6dcb7602952538f7 low confidence liver sample_accession: GSM3110210 sample_title: AJHCC025 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC025 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110211 Runtime Siftome inference GEO:sample:GSM3110211:aa78b123ea1e39f7174b578766fb4a3511e87c16cc85aed7b34fe08acb00629c low confidence liver sample_accession: GSM3110211 sample_title: AJHCC026 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC026 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110212 Runtime Siftome inference GEO:sample:GSM3110212:d401741357cc365c38a08c9754e104fa5391be95685034e038bef13ee9cd90e2 low confidence liver sample_accession: GSM3110212 sample_title: AJHCC027 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC027 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110213 Runtime Siftome inference GEO:sample:GSM3110213:1ef1954e34e08ce19569b4186873910f9daf40234384b929a77595ef90179418 low confidence liver sample_accession: GSM3110213 sample_title: AJHCC028 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC028 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110214 Runtime Siftome inference GEO:sample:GSM3110214:2c3f7c6b88690b63ef135625e992c1cf372635c5b7587068602853ea702730c3 low confidence liver sample_accession: GSM3110214 sample_title: AJHCC029 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC029 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110215 Runtime Siftome inference GEO:sample:GSM3110215:108dffbcfada497ec371375b203f28221814c03ff63d0d562d3fb2c8da807ec5 low confidence liver sample_accession: GSM3110215 sample_title: AJHCC030 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC030 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110216 Runtime Siftome inference GEO:sample:GSM3110216:a83d79cb953a42593509db3305a79b6cbb495ec9c023ab34c7999bfe7c4c42e0 low confidence liver sample_accession: GSM3110216 sample_title: AJHCC031 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC031 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110217 Runtime Siftome inference GEO:sample:GSM3110217:e065307abbf19a47819f011ae1d1186fe43b0322432e1bb852a636bb7a440b94 low confidence liver sample_accession: GSM3110217 sample_title: AJHCC033 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC033 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110218 Runtime Siftome inference GEO:sample:GSM3110218:d81ad7423609f89632be51a7fd6d32b5975d4016b77e6da78425994ae71f42e6 low confidence liver sample_accession: GSM3110218 sample_title: AJHCC034 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC034 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110219 Runtime Siftome inference GEO:sample:GSM3110219:84a9b1b3e49e616fc00a8c19fdc027b7c8d6f7e8b7975ab40f3f5a858d1dc9f6 low confidence liver sample_accession: GSM3110219 sample_title: AJHCC036 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC036 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110220 Runtime Siftome inference GEO:sample:GSM3110220:adf019e004402fa75de394ce946b2353405ad485223518f615fa5ac0da4759b9 low confidence liver sample_accession: GSM3110220 sample_title: AJHCC038 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC038 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110221 Runtime Siftome inference GEO:sample:GSM3110221:3896bfa12293eeebc8bcddab5d1ba9a17231eef8c99a5515868e3c58faa79cde low confidence liver sample_accession: GSM3110221 sample_title: AJHCC039 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC039 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110222 Runtime Siftome inference GEO:sample:GSM3110222:c4f3f37bb404bae637dc6f65f8f9dad837b644a83ba1e3ae1e27bcbe18dac4f4 low confidence liver sample_accession: GSM3110222 sample_title: AJHCC040 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC040 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110223 Runtime Siftome inference GEO:sample:GSM3110223:bc4d39f51b7d09f8b8dcc2096aaf2ec203f18b17fe756d40e5fdf385de6551e1 low confidence liver sample_accession: GSM3110223 sample_title: AJHCC041 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC041 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110224 Runtime Siftome inference GEO:sample:GSM3110224:cf4a00ae55ddb9e24c44b45a6c86082243a67e751e2ef86af6c6c6a4f33e5c8d low confidence liver sample_accession: GSM3110224 sample_title: AJHCC042 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC042 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110225 Runtime Siftome inference GEO:sample:GSM3110225:7dba3976a4c260eee271c25d54f4bf5aa29c9c938ed171f99a64524cbc07fa72 low confidence liver sample_accession: GSM3110225 sample_title: AJHCC043 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC043 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110226 Runtime Siftome inference GEO:sample:GSM3110226:443edd944c4b6398fa45d77c19557dcceb77e9e5af1e738de02c7489ef0cc6f0 low confidence liver sample_accession: GSM3110226 sample_title: AJHCC044 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC044 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110227 Runtime Siftome inference GEO:sample:GSM3110227:7cfeb39add40304edcfef1ef0ddf79c4408cab8621d9c3416d80a9473b5884be low confidence liver sample_accession: GSM3110227 sample_title: AJHCC046 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC046 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110228 Runtime Siftome inference GEO:sample:GSM3110228:e253a9e25fdb7b7c20df31ac505655c86ba9370ca64e1388dd0d48905ce5344b low confidence liver sample_accession: GSM3110228 sample_title: AJHCC048 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC048 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110229 Runtime Siftome inference GEO:sample:GSM3110229:9e6d3a66e090e6bf1ca0b6b341cc9a29d2fc11f0dc8f12949e2dbbca8c4ac957 low confidence liver sample_accession: GSM3110229 sample_title: AJHCC050 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC050 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110230 Runtime Siftome inference GEO:sample:GSM3110230:eceaf1f79d83346f8bf258f772ac4410369ff3ddec94ab7ee7e2e988421e09d3 low confidence liver sample_accession: GSM3110230 sample_title: AJHCC051 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC051 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110231 Runtime Siftome inference GEO:sample:GSM3110231:7d6fe2aae3b6e387577b3bc4a9f7c21b9a337450977d383db4a72f0e740da8ba low confidence liver sample_accession: GSM3110231 sample_title: AJHCC052 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC052 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110232 Runtime Siftome inference GEO:sample:GSM3110232:cf1475c668bd465f9b53f8a4f7c1f1d9031853b0b3405ddd6c16825fc4b85fa4 low confidence liver sample_accession: GSM3110232 sample_title: AJHCC053 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC053 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110233 Runtime Siftome inference GEO:sample:GSM3110233:606a9ed8c53a457d57df4b69c5086bdca60ca0d1efa150371a1772918a3a2b8f low confidence liver sample_accession: GSM3110233 sample_title: AJHCC054 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC054 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110234 Runtime Siftome inference GEO:sample:GSM3110234:2fb5dfa65df54719fdd8633ad0a0e75d30c471925198df6d5dc0e237eae28970 low confidence liver sample_accession: GSM3110234 sample_title: AJHCC056 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC056 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110235 Runtime Siftome inference GEO:sample:GSM3110235:16d15c64b4f1b492fe65f399caf34b54910b9dca6d5bb9c3646fbd2d12ad2c6e low confidence liver sample_accession: GSM3110235 sample_title: AJHCC057 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC057 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110236 Runtime Siftome inference GEO:sample:GSM3110236:371775f680c3dea8723d5bdb7a47af9cd1763a37043d788eafa2f666f7a96a18 low confidence liver sample_accession: GSM3110236 sample_title: AJHCC058 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC058 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110237 Runtime Siftome inference GEO:sample:GSM3110237:9632313638d22d45fbabc906d53d197538203915c9a10be8f2c67f8b0905d56a low confidence liver sample_accession: GSM3110237 sample_title: AJHCC059 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC059 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110238 Runtime Siftome inference GEO:sample:GSM3110238:7fabac7c8e9fc4b39a2e67150b680a5c4d053ecb2d3fe0c7b448cd426f1e4581 low confidence liver sample_accession: GSM3110238 sample_title: AJHCC060 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC060 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110239 Runtime Siftome inference GEO:sample:GSM3110239:a52905c7480ed83b9cb2f40e08960afa732fad07800f5563d5de960657e65386 low confidence liver sample_accession: GSM3110239 sample_title: AJHCC061 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC061 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110240 Runtime Siftome inference GEO:sample:GSM3110240:b644d3fd0d1def941f235290aabdbc6af264ae51c22bd67c6b6379990a9f1012 low confidence liver sample_accession: GSM3110240 sample_title: AJHCC062 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC062 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110241 Runtime Siftome inference GEO:sample:GSM3110241:465da2e19e5f6c0afa24d6b314449f74ac5eeed22358ac8d118362e6e17b8d25 low confidence liver sample_accession: GSM3110241 sample_title: AJHCC063 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC063 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110242 Runtime Siftome inference GEO:sample:GSM3110242:662b3d911c08e319fb645ef97ad393ef66d720ecb19af54371ebfe132d1c4873 low confidence liver sample_accession: GSM3110242 sample_title: AJHCC064 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC064 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110243 Runtime Siftome inference GEO:sample:GSM3110243:04bea5137dec0e0783672bb0ea6cc3db2c476548acda90c816dc56a71b8ee24a low confidence liver sample_accession: GSM3110243 sample_title: AJHCC065 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC065 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110244 Runtime Siftome inference GEO:sample:GSM3110244:d4168901e2ea3eecca0fb2f5245be731580a5adc6a5a11c12cb7695e1050eeaa low confidence liver sample_accession: GSM3110244 sample_title: AJHCC066 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC066 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110245 Runtime Siftome inference GEO:sample:GSM3110245:550a91a517511538bc94eaaeb4e914ee87bff90f8e34979cf74441acac8d0a8a low confidence liver sample_accession: GSM3110245 sample_title: AJHCC067 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC067 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110246 Runtime Siftome inference GEO:sample:GSM3110246:668715a352b0d2f1b102202f07cc708b54ea7a49b9c1c312fd8c36c2cb42aa98 low confidence liver sample_accession: GSM3110246 sample_title: AJHCC068 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC068 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110247 Runtime Siftome inference GEO:sample:GSM3110247:457c01a0b6e23f939b119708c032304f3ef5b61dadee9bf1a3172a1989d3e6eb low confidence liver sample_accession: GSM3110247 sample_title: AJHCC070 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC070 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110248 Runtime Siftome inference GEO:sample:GSM3110248:d96223e230e1b08dd6a26fedcba1c339627bd41203a75124b0b1739b53a1926e low confidence liver sample_accession: GSM3110248 sample_title: AJHCC072 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC072 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110249 Runtime Siftome inference GEO:sample:GSM3110249:0515ca60f45481dc90244924cb4104bfac8a52867d140ef4f24a0a293fd17ead low confidence liver sample_accession: GSM3110249 sample_title: AJHCC073 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC073 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110250 Runtime Siftome inference GEO:sample:GSM3110250:697f14a444c317a52fb14af9f62c2875027230cc3df73f2cfcbd0c0d9b11c180 low confidence liver sample_accession: GSM3110250 sample_title: AJHCC074 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC074 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110251 Runtime Siftome inference GEO:sample:GSM3110251:08215452f2d78b92505724ae0875cc60e1cf2fe883e9436a3dc61d522b21346f low confidence liver sample_accession: GSM3110251 sample_title: AJHCC075 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC075 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110252 Runtime Siftome inference GEO:sample:GSM3110252:48071d19c7b661c6a28d16ae0d46795bb96bfd56f109cc88ab92e33abae4cc76 low confidence liver sample_accession: GSM3110252 sample_title: AJHCC076 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC076 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110253 Runtime Siftome inference GEO:sample:GSM3110253:b6add110a168fe81a9f90ad032c6b5f4f71b54a3b9ee1a04d3b2bc43330ce00f low confidence liver sample_accession: GSM3110253 sample_title: AJHCC078 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC078 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110254 Runtime Siftome inference GEO:sample:GSM3110254:39722e6c68d59bb30c9595b56f10a0539267ac2e9197acf6e209968634db7936 low confidence liver sample_accession: GSM3110254 sample_title: AJHCC079 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC079 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110255 Runtime Siftome inference GEO:sample:GSM3110255:0177bcb4cddc894735c49c4fb73e691145ec6c286f8754b99c08f1f5974ed8be low confidence liver sample_accession: GSM3110255 sample_title: AJHCC080 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC080 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110256 Runtime Siftome inference GEO:sample:GSM3110256:5d5a77dd00b90c02d0748cd88b9b26b95057d5eebc81b7b6ab0fba38d7b7c367 low confidence liver sample_accession: GSM3110256 sample_title: AJHCC081 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC081 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110257 Runtime Siftome inference GEO:sample:GSM3110257:b7695d34019069ed4ce99e6c44f7b4b6c9218437b8cb179cc67778a15dcef386 low confidence liver sample_accession: GSM3110257 sample_title: AJHCC082 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC082 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110258 Runtime Siftome inference GEO:sample:GSM3110258:959e5dcd123ed768bc90d8a6c19439d5958a6f5771169c6d0e24d1a0f0bd1386 low confidence liver sample_accession: GSM3110258 sample_title: AJHCC094 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC094 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110259 Runtime Siftome inference GEO:sample:GSM3110259:a306663c85c0ea6c2cd813258b2008fa869aa57c8f92f36d996520e2fe4d8baf low confidence liver sample_accession: GSM3110259 sample_title: AJHCC095 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC095 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110260 Runtime Siftome inference GEO:sample:GSM3110260:cff8b7c6f95239094133cfcebdeb1e1fbfc81426f58442a05b67f96a9fc0b09a low confidence liver sample_accession: GSM3110260 sample_title: AJHCC096 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S4; disease state: HCC AJHCC096 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110261 Runtime Siftome inference GEO:sample:GSM3110261:d24114de1e3d88fc86ca58b8c2729bf47eb7e8db945c4c57086093f32a5fcf55 low confidence liver sample_accession: GSM3110261 sample_title: AJHCC097 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S1; disease state: HCC AJHCC097 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110262 Runtime Siftome inference GEO:sample:GSM3110262:cd93f7c13bcc1e1074fde584721b8a0e79e54f45f93ec5e29ac7954243b4cf07 low confidence liver sample_accession: GSM3110262 sample_title: AJHCC098 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC098 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110263 Runtime Siftome inference GEO:sample:GSM3110263:5d33bc58f073922d11cab8bd1504e6349bd0e3d51242b85108020a64eb123c4a low confidence liver sample_accession: GSM3110263 sample_title: AJHCC099 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S3; disease state: HCC AJHCC099 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110264 Runtime Siftome inference GEO:sample:GSM3110264:5d854e89820e6626b929a88b849d4414e1c7f98d918aea2e59ca3f3434513c61 low confidence liver sample_accession: GSM3110264 sample_title: AJHCC100 source_name: Hepatocellular carcinoma characteristics: tissue: Liver; molecular subtype: S2; disease state: HCC AJHCC100 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110265 Runtime Siftome inference GEO:sample:GSM3110265:728ad95752e61529a1ec61b837fb6a2509cf053368e31bb45b90fc81537d7247 low confidence liver sample_accession: GSM3110265 sample_title: AJNT038 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT038 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110266 Runtime Siftome inference GEO:sample:GSM3110266:6bea77b95e43e23ecd8e16ad92f92bc1170e729f5ee99d54063c9f56723cac45 low confidence liver sample_accession: GSM3110266 sample_title: AJNT039 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT039 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110267 Runtime Siftome inference GEO:sample:GSM3110267:46e97a98fae00b51cd6d1d7a9ea29d22a1ac89622613d291602cb88f061e05fd low confidence liver sample_accession: GSM3110267 sample_title: AJNT040 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT040 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110268 Runtime Siftome inference GEO:sample:GSM3110268:3a29aed88efc191b99ce58ff62b7f10d14739c46524bdcdc3e6acb71e22e54a4 low confidence liver sample_accession: GSM3110268 sample_title: AJNT048 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT048 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110269 Runtime Siftome inference GEO:sample:GSM3110269:99c197fe7ea2a6d53db8d69c7ff1e20cb63bb1fbed39d03a3611055e2910ce27 low confidence liver sample_accession: GSM3110269 sample_title: AJNT052 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT052 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110270 Runtime Siftome inference GEO:sample:GSM3110270:7b1dcf0d1ed237704a5146eaed2a568d026ee1175fa3c287ab4e8284ed37529e low confidence liver sample_accession: GSM3110270 sample_title: AJNT079 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT079 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110271 Runtime Siftome inference GEO:sample:GSM3110271:e418e47ba14aefdf4c6dd2783566468902d61b45600657e3bdfcfe344baabee7 low confidence liver sample_accession: GSM3110271 sample_title: AJNT080 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT080 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110272 Runtime Siftome inference GEO:sample:GSM3110272:223079c9f35d068034ff39ae57684125b0f1d521e560914311f58176c771c988 low confidence liver sample_accession: GSM3110272 sample_title: AJNT081 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT081 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110273 Runtime Siftome inference GEO:sample:GSM3110273:cdaddb653f6119e6e877a3cecad2f262fa9e668bbea11fd098a4aa7fa42facdd low confidence liver sample_accession: GSM3110273 sample_title: AJNT098 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT098 controlled vocabulary controlled vocabulary tissue match: liver

tissue liver sample GSM3110274 Runtime Siftome inference GEO:sample:GSM3110274:80afce56204252f63788f4f7cd6454dbf1750755f7d27c5d72367fdeef3671e7 low confidence liver sample_accession: GSM3110274 sample_title: AJNT100 source_name: Non-tumor characteristics: tissue: Liver; molecular subtype: None; disease state: non-tumor AJNT100 controlled vocabulary controlled vocabulary tissue match: liver

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

68

GSM3110197 AJHCC003 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110198 AJHCC004 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110199 AJHCC005 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110200 AJHCC007 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110201 AJHCC009 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110202 AJHCC010 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110203 AJHCC012 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110204 AJHCC013 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110205 AJHCC014 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110206 AJHCC016 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110207 AJHCC017 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110208 AJHCC019 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110209 AJHCC020 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110210 AJHCC025 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110211 AJHCC026 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110212 AJHCC027 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110213 AJHCC028 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110214 AJHCC029 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110215 AJHCC030 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110216 AJHCC031 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110217 AJHCC033 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110218 AJHCC034 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110219 AJHCC036 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110220 AJHCC038 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110221 AJHCC039 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110222 AJHCC040 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110223 AJHCC041 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110224 AJHCC042 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110225 AJHCC043 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110226 AJHCC044 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110227 AJHCC046 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110228 AJHCC048 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110229 AJHCC050 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110230 AJHCC051 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110231 AJHCC052 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110232 AJHCC053 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110233 AJHCC054 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110234 AJHCC056 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110235 AJHCC057 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110236 AJHCC058 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110237 AJHCC059 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110238 AJHCC060 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110239 AJHCC061 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110240 AJHCC062 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110241 AJHCC063 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110242 AJHCC064 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110243 AJHCC065 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110244 AJHCC066 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110245 AJHCC067 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110246 AJHCC068 tumor sample Case marker detected. Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC

18 more samples are hidden from this preview.

Possible control samples

Samples currently treated as controls or baseline.

10

GSM3110265 AJNT038 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110266 AJNT039 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110267 AJNT040 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110268 AJNT048 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110269 AJNT052 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110270 AJNT079 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110271 AJNT080 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110272 AJNT081 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110273 AJNT098 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110274 AJNT100 normal tissue Control marker detected. Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

85 pts

Clarity: 85%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

tumor sample

68 samples

GSM3110197 AJHCC003 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110198 AJHCC004 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110199 AJHCC005 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110200 AJHCC007 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110201 AJHCC009 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110202 AJHCC010 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110203 AJHCC012 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110204 AJHCC013 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110205 AJHCC014 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110206 AJHCC016 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110207 AJHCC017 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110208 AJHCC019 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110209 AJHCC020 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110210 AJHCC025 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110211 AJHCC026 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110212 AJHCC027 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110213 AJHCC028 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110214 AJHCC029 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110215 AJHCC030 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110216 AJHCC031 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110217 AJHCC033 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110218 AJHCC034 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110219 AJHCC036 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110220 AJHCC038 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110221 AJHCC039 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110222 AJHCC040 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110223 AJHCC041 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110224 AJHCC042 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110225 AJHCC043 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110226 AJHCC044 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110227 AJHCC046 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110228 AJHCC048 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110229 AJHCC050 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110230 AJHCC051 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110231 AJHCC052 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110232 AJHCC053 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110233 AJHCC054 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110234 AJHCC056 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110235 AJHCC057 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110236 AJHCC058 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110237 AJHCC059 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110238 AJHCC060 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110239 AJHCC061 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110240 AJHCC062 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110241 AJHCC063 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110242 AJHCC064 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110243 AJHCC065 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110244 AJHCC066 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110245 AJHCC067 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110246 AJHCC068 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110247 AJHCC070 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110248 AJHCC072 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110249 AJHCC073 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110250 AJHCC074 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110251 AJHCC075 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110252 AJHCC076 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110253 AJHCC078 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110254 AJHCC079 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110255 AJHCC080 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110256 AJHCC081 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110257 AJHCC082 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110258 AJHCC094 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110259 AJHCC095 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC
GSM3110260 AJHCC096 Hepatocellular carcinoma tissue: Liver; molecular subtype: S4; disease state: HCC
GSM3110261 AJHCC097 Hepatocellular carcinoma tissue: Liver; molecular subtype: S1; disease state: HCC
GSM3110262 AJHCC098 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110263 AJHCC099 Hepatocellular carcinoma tissue: Liver; molecular subtype: S3; disease state: HCC
GSM3110264 AJHCC100 Hepatocellular carcinoma tissue: Liver; molecular subtype: S2; disease state: HCC

normal tissue

10 samples

GSM3110265 AJNT038 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110266 AJNT039 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110267 AJNT040 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110268 AJNT048 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110269 AJNT052 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110270 AJNT079 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110271 AJNT080 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110272 AJNT081 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110273 AJNT098 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor
GSM3110274 AJNT100 Non-tumor tissue: Liver; molecular subtype: None; disease state: non-tumor

Score Breakdown

60%

relevance

Organism normalized.
Assay type normalized.
Tissue metadata normalized.

0%

comparison suitability

Tumor and normal sample groups detected.
No excluded sample type flags detected.
Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
Patient tissue or biopsy specimens boosted for tissue comparison triage.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.

85%

metadata quality

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
Group clarity: Rule-based grouping found both case and control samples.
Disease clarity: Disease or condition metadata was not normalized.
Tissue clarity: Tissue metadata normalized.
Treatment clarity: No unclear treatment split detected in the sample metadata.
Replicate clarity: No pooled sample or technical replicate flags detected.
Data availability clarity: Dataset-level processed or raw data availability is explicit.

100%

data availability

Processed data available.
Raw data available.

34%

overall

Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Sample Links

78 samples

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.