Siftome Phase 3L

GSE125285

Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas

Not suitable Dataset does not meet the current suitability threshold.

Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset

Source: GEO
Search intent: Patient tissue tumor-vs-normal
Intent behavior: search-intent-behavior-v1
Submission date: 2019-01-17
Last update: 2021-05-20
Organization: Indiana University School of Public Health
Department: Department of Epidemiology
Public date: 2020-05-08
Experiment types: Expression profiling by high throughput sequencing
Platforms: GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Series type: Series
SubSeries: Not available
BioProject: PRJNA515744
Supplementary files: TXT: GSE125285_S35_log2GE.txt.gz
Organism: Homo sapiens
Assay: bulk RNA-seq
Samples: 70
Study design: Tumor vs matched normal
Specimen/source: Tissue
Scoring version: intent-aware-scoring-v15
Ranking batch: b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created: 2026-06-05T20:20:27.088676Z
Warning version: intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism: Homo sapiens
Assay: bulk RNA-seq
Specimen/source: patient tissue or biopsy
Controls: matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters: Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules: missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps: non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts: microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs matched normal Tissue

Tumor samples and matched/adjacent normal controls detected.
Tissue-like source terms detected.
Case metadata contains tumor or disease terms.
Control metadata contains normal or healthy-control terms.

Analysis Readiness

Ready after review

97% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

Review the sample grouping CSV and contrast CSV before running differential expression.
Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

No expert-review triggers were detected by Siftome.

Why This Is Ranked Here

Patient tissue tumor-vs-normal

Not suitable Dataset does not meet the current suitability threshold.

Score Components

relevance 60% Organism normalized. Assay type normalized. Tissue metadata normalized.
comparison suitability 0% Tumor and normal sample groups detected. No excluded sample type flags detected. Matched tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
metadata quality 85% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
data availability 100% Processed data available. Raw data available.
overall 34% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Derived Classifications

Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
Study design Tumor vs matched normal Study design remains rule-derived: Tumor vs matched normal.
Specimen/source Tissue Specimen/source remains rule-derived: Tissue.
Likely case group tumor sample 35 samples
Likely control group normal tissue 35 samples

Warnings

DISEASE_LABEL_UNCLEAR warning Disease or condition label could not be normalized.

Intent Interpretation

Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
Specimen assumption patient tissue or biopsy Derived specimen/source is Tissue.
Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs matched normal; likely groups are tumor sample vs normal tissue.
Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Warning rules 1 active warning missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Downgrade or exclusion reason Downgraded disease context: not a colorectal/GI cancer cohort. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

Recommendation Not suitable Dataset does not meet the current suitability threshold.
Supporting fact Tumor vs matched normal · Tissue · suitability 0%. Contributed to match or upgrade evidence.
Supporting fact Prioritized for patient tissue tumor-vs-normal triage. Contributed to match or upgrade evidence.
Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
Supporting fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to match or upgrade evidence.
Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
Supporting fact 1 warning require review. Contributed to match or upgrade evidence.
Caution fact Disease or condition label could not be normalized. Contributed to downgrade or manual-review evidence.
Caution fact Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
Caution fact Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized. Contributed to downgrade or manual-review evidence.
Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because tumor/normal grouping is from a non-colorectal cancer context. Contributed to downgrade or manual-review evidence.
Caution fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to downgrade or manual-review evidence.
Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

No active manual corrections are applied to this dataset.

Organism · Normalization rules Organism remains rule-derived: Homo sapiens.
Assay · Normalization rules Assay remains rule-derived: bulk RNA-seq.
Study design · Classifier and grouping rules Study design remains rule-derived: Tumor vs matched normal.
Specimen/source · Normalization rules Specimen/source remains rule-derived: Tissue.

Dataset organism

Dataset field · Organism · Global correction

Wrong organism

Current derived value

Homo sapiens

Raw GEO organism

dataset_accession: GSE125285
organism: Homo sapiens
dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas

Dataset assay

Dataset field · Assay · Global correction

Wrong assay

Current derived value

bulk RNA-seq

Raw GEO assay metadata

assay_type: bulk RNA-seq
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL11154 Illumina HiSeq 2000 (Homo sapiens)
dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas

Study design

Dataset field · Study design · Global correction

Wrong study design

Current derived value

Tumor vs matched normal

Raw GEO study and sample metadata

dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas
experiment_types: Expression profiling by high throughput sequencing
sample_context: GSM3567640: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473
GSM3567641: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473
GSM3567642: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476
GSM3567643: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476
GSM3567644: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487
GSM3567645: source_name=Skin; characteristics
[Correction source preview truncated.]

Specimen/source type

Dataset field · Specimen/source · Global correction

Wrong specimen/source

Current derived value

Tissue

Raw GEO sample source metadata

dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas
sample_context: GSM3567640: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473
GSM3567641: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473
GSM3567642: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476
GSM3567643: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476
GSM3567644: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487
GSM3567645: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id
[Correction source preview truncated.]

Disease context

Dataset field · Disease context · Global correction

Wrong disease context

Current derived value

No disease context detected

Raw GEO disease context metadata

dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas
sample_context: GSM3567640: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473
GSM3567641: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473
GSM3567642: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476
GSM3567643: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476
GSM3567644: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487
GSM3567645: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id
[Correction source preview truncated.]

Intent exclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Exclude from intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE125285
dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM3567640: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473
GSM3567641: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473
GSM3567642: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476
GSM3567643: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476
GSM3567644: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487
GSM3567645: source_name=Skin; charact
[Correction source preview truncated.]

Intent-only inclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Include only for intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE125285
dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM3567640: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473
GSM3567641: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473
GSM3567642: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476
GSM3567643: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476
GSM3567644: source_name=Skin; characteristics=disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487
GSM3567645: source_name=Skin; charact
[Correction source preview truncated.]

GSM3567640 grouping

Sample field · Grouping · Global correction · GSM3567640

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567640
sample_title: 14473-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473

GSM3567640 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567640

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567640
sample_title: 14473-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473

GSM3567641 grouping

Sample field · Grouping · Global correction · GSM3567641

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567641
sample_title: 14473-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473

GSM3567641 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567641

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567641
sample_title: 14473-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473

GSM3567642 grouping

Sample field · Grouping · Global correction · GSM3567642

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567642
sample_title: 14476-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476

GSM3567642 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567642

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567642
sample_title: 14476-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476

GSM3567643 grouping

Sample field · Grouping · Global correction · GSM3567643

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567643
sample_title: 14476-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476

GSM3567643 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567643

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567643
sample_title: 14476-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476

GSM3567644 grouping

Sample field · Grouping · Global correction · GSM3567644

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567644
sample_title: 14487-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487

GSM3567644 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567644

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567644
sample_title: 14487-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487

GSM3567645 grouping

Sample field · Grouping · Global correction · GSM3567645

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567645
sample_title: 14487-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14487

GSM3567645 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567645

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567645
sample_title: 14487-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14487

GSM3567646 grouping

Sample field · Grouping · Global correction · GSM3567646

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567646
sample_title: 14522-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14522

GSM3567646 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567646

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567646
sample_title: 14522-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14522

GSM3567647 grouping

Sample field · Grouping · Global correction · GSM3567647

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567647
sample_title: 14522-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14522

GSM3567647 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567647

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567647
sample_title: 14522-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14522

GSM3567648 grouping

Sample field · Grouping · Global correction · GSM3567648

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567648
sample_title: 14630-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14630

GSM3567648 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567648

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567648
sample_title: 14630-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14630

GSM3567649 grouping

Sample field · Grouping · Global correction · GSM3567649

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567649
sample_title: 14630-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14630

GSM3567649 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567649

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567649
sample_title: 14630-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14630

GSM3567650 grouping

Sample field · Grouping · Global correction · GSM3567650

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567650
sample_title: 14644-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14644

GSM3567650 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567650

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567650
sample_title: 14644-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14644

GSM3567651 grouping

Sample field · Grouping · Global correction · GSM3567651

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567651
sample_title: 14644-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14644

GSM3567651 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567651

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567651
sample_title: 14644-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14644

GSM3567652 grouping

Sample field · Grouping · Global correction · GSM3567652

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567652
sample_title: 14666-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14666

GSM3567652 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567652

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567652
sample_title: 14666-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14666

GSM3567653 grouping

Sample field · Grouping · Global correction · GSM3567653

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567653
sample_title: 14666-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14666

GSM3567653 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567653

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567653
sample_title: 14666-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14666

GSM3567654 grouping

Sample field · Grouping · Global correction · GSM3567654

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567654
sample_title: 14688-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14688

GSM3567654 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567654

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567654
sample_title: 14688-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14688

GSM3567655 grouping

Sample field · Grouping · Global correction · GSM3567655

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567655
sample_title: 14688-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14688

GSM3567655 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567655

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567655
sample_title: 14688-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14688

GSM3567656 grouping

Sample field · Grouping · Global correction · GSM3567656

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567656
sample_title: 15047-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15047

GSM3567656 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567656

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567656
sample_title: 15047-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15047

GSM3567657 grouping

Sample field · Grouping · Global correction · GSM3567657

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567657
sample_title: 15047-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15047

GSM3567657 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567657

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567657
sample_title: 15047-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15047

GSM3567658 grouping

Sample field · Grouping · Global correction · GSM3567658

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567658
sample_title: 15318-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15318

GSM3567658 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567658

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567658
sample_title: 15318-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15318

GSM3567659 grouping

Sample field · Grouping · Global correction · GSM3567659

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567659
sample_title: 15318-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15318

GSM3567659 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567659

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567659
sample_title: 15318-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15318

GSM3567660 grouping

Sample field · Grouping · Global correction · GSM3567660

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567660
sample_title: 15360-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15360

GSM3567660 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567660

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567660
sample_title: 15360-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15360

GSM3567661 grouping

Sample field · Grouping · Global correction · GSM3567661

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567661
sample_title: 15360-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15360

GSM3567661 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567661

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567661
sample_title: 15360-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15360

GSM3567662 grouping

Sample field · Grouping · Global correction · GSM3567662

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567662
sample_title: 15372-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15372

GSM3567662 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567662

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567662
sample_title: 15372-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15372

GSM3567663 grouping

Sample field · Grouping · Global correction · GSM3567663

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567663
sample_title: 15372-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15372

GSM3567663 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567663

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567663
sample_title: 15372-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15372

GSM3567664 grouping

Sample field · Grouping · Global correction · GSM3567664

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567664
sample_title: 15392-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15392

GSM3567664 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567664

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567664
sample_title: 15392-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15392

GSM3567665 grouping

Sample field · Grouping · Global correction · GSM3567665

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567665
sample_title: 15392-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15392

GSM3567665 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567665

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567665
sample_title: 15392-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15392

GSM3567666 grouping

Sample field · Grouping · Global correction · GSM3567666

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567666
sample_title: 15409-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15409

GSM3567666 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567666

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567666
sample_title: 15409-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15409

GSM3567667 grouping

Sample field · Grouping · Global correction · GSM3567667

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567667
sample_title: 15409-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15409

GSM3567667 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567667

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567667
sample_title: 15409-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15409

GSM3567668 grouping

Sample field · Grouping · Global correction · GSM3567668

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567668
sample_title: 15416-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15416

GSM3567668 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567668

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567668
sample_title: 15416-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15416

GSM3567669 grouping

Sample field · Grouping · Global correction · GSM3567669

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567669
sample_title: 15416-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15416

GSM3567669 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567669

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567669
sample_title: 15416-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15416

GSM3567670 grouping

Sample field · Grouping · Global correction · GSM3567670

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567670
sample_title: 15472-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15472

GSM3567670 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567670

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567670
sample_title: 15472-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15472

GSM3567671 grouping

Sample field · Grouping · Global correction · GSM3567671

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567671
sample_title: 15472-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15472

GSM3567671 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567671

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567671
sample_title: 15472-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15472

GSM3567672 grouping

Sample field · Grouping · Global correction · GSM3567672

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567672
sample_title: 15484-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15484

GSM3567672 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567672

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567672
sample_title: 15484-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15484

GSM3567673 grouping

Sample field · Grouping · Global correction · GSM3567673

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567673
sample_title: 15484-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15484

GSM3567673 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567673

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567673
sample_title: 15484-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15484

GSM3567674 grouping

Sample field · Grouping · Global correction · GSM3567674

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567674
sample_title: 15514-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15514

GSM3567674 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567674

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567674
sample_title: 15514-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15514

GSM3567675 grouping

Sample field · Grouping · Global correction · GSM3567675

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567675
sample_title: 15514-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15514

GSM3567675 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567675

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567675
sample_title: 15514-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15514

GSM3567676 grouping

Sample field · Grouping · Global correction · GSM3567676

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567676
sample_title: 15706-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15706

GSM3567676 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567676

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567676
sample_title: 15706-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15706

GSM3567677 grouping

Sample field · Grouping · Global correction · GSM3567677

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567677
sample_title: 15706-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15706

GSM3567677 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567677

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567677
sample_title: 15706-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15706

GSM3567678 grouping

Sample field · Grouping · Global correction · GSM3567678

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567678
sample_title: 15714-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15714

GSM3567678 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567678

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567678
sample_title: 15714-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15714

GSM3567679 grouping

Sample field · Grouping · Global correction · GSM3567679

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567679
sample_title: 15714-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15714

GSM3567679 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567679

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567679
sample_title: 15714-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15714

GSM3567680 grouping

Sample field · Grouping · Global correction · GSM3567680

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567680
sample_title: 15715-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15715

GSM3567680 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567680

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567680
sample_title: 15715-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15715

GSM3567681 grouping

Sample field · Grouping · Global correction · GSM3567681

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567681
sample_title: 15715-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15715

GSM3567681 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567681

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567681
sample_title: 15715-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15715

GSM3567682 grouping

Sample field · Grouping · Global correction · GSM3567682

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567682
sample_title: 15797-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15797

GSM3567682 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567682

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567682
sample_title: 15797-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15797

GSM3567683 grouping

Sample field · Grouping · Global correction · GSM3567683

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567683
sample_title: 15797-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15797

GSM3567683 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567683

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567683
sample_title: 15797-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15797

GSM3567684 grouping

Sample field · Grouping · Global correction · GSM3567684

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567684
sample_title: 16037-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16037

GSM3567684 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567684

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567684
sample_title: 16037-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16037

GSM3567685 grouping

Sample field · Grouping · Global correction · GSM3567685

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567685
sample_title: 16037-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16037

GSM3567685 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567685

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567685
sample_title: 16037-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16037

GSM3567686 grouping

Sample field · Grouping · Global correction · GSM3567686

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567686
sample_title: 16072-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16072

GSM3567686 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567686

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567686
sample_title: 16072-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16072

GSM3567687 grouping

Sample field · Grouping · Global correction · GSM3567687

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567687
sample_title: 16072-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16072

GSM3567687 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567687

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567687
sample_title: 16072-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16072

GSM3567688 grouping

Sample field · Grouping · Global correction · GSM3567688

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567688
sample_title: 16111-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16111

GSM3567688 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567688

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567688
sample_title: 16111-N
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16111

GSM3567689 grouping

Sample field · Grouping · Global correction · GSM3567689

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567689
sample_title: 16111-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16111

GSM3567689 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567689

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567689
sample_title: 16111-T
source_name: Skin
characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16111

GSM3567690 grouping

Sample field · Grouping · Global correction · GSM3567690

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567690
sample_title: 14478-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 14478

GSM3567690 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567690

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567690
sample_title: 14478-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 14478

GSM3567691 grouping

Sample field · Grouping · Global correction · GSM3567691

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567691
sample_title: 14478-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14478

GSM3567691 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567691

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567691
sample_title: 14478-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14478

GSM3567692 grouping

Sample field · Grouping · Global correction · GSM3567692

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567692
sample_title: 14672-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 14672

GSM3567692 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567692

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567692
sample_title: 14672-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 14672

GSM3567693 grouping

Sample field · Grouping · Global correction · GSM3567693

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567693
sample_title: 14672-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14672

GSM3567693 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567693

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567693
sample_title: 14672-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14672

GSM3567694 grouping

Sample field · Grouping · Global correction · GSM3567694

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567694
sample_title: 15179-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15179

GSM3567694 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567694

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567694
sample_title: 15179-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15179

GSM3567695 grouping

Sample field · Grouping · Global correction · GSM3567695

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567695
sample_title: 15179-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15179

GSM3567695 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567695

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567695
sample_title: 15179-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15179

GSM3567696 grouping

Sample field · Grouping · Global correction · GSM3567696

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567696
sample_title: 15336-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15336

GSM3567696 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567696

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567696
sample_title: 15336-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15336

GSM3567697 grouping

Sample field · Grouping · Global correction · GSM3567697

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567697
sample_title: 15336-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15336

GSM3567697 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567697

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567697
sample_title: 15336-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15336

GSM3567698 grouping

Sample field · Grouping · Global correction · GSM3567698

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567698
sample_title: 15551-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15551

GSM3567698 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567698

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567698
sample_title: 15551-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15551

GSM3567699 grouping

Sample field · Grouping · Global correction · GSM3567699

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567699
sample_title: 15551-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15551

GSM3567699 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567699

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567699
sample_title: 15551-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15551

GSM3567700 grouping

Sample field · Grouping · Global correction · GSM3567700

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567700
sample_title: 15554-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15554

GSM3567700 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567700

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567700
sample_title: 15554-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15554

GSM3567701 grouping

Sample field · Grouping · Global correction · GSM3567701

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567701
sample_title: 15554-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15554

GSM3567701 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567701

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567701
sample_title: 15554-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15554

GSM3567702 grouping

Sample field · Grouping · Global correction · GSM3567702

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567702
sample_title: 15678-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15678

GSM3567702 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567702

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567702
sample_title: 15678-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15678

GSM3567703 grouping

Sample field · Grouping · Global correction · GSM3567703

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567703
sample_title: 15678-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15678

GSM3567703 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567703

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567703
sample_title: 15678-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15678

GSM3567704 grouping

Sample field · Grouping · Global correction · GSM3567704

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567704
sample_title: 15685-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15685

GSM3567704 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567704

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567704
sample_title: 15685-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15685

GSM3567705 grouping

Sample field · Grouping · Global correction · GSM3567705

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567705
sample_title: 15685-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15685

GSM3567705 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567705

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567705
sample_title: 15685-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15685

GSM3567706 grouping

Sample field · Grouping · Global correction · GSM3567706

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567706
sample_title: 15724-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15724

GSM3567706 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567706

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567706
sample_title: 15724-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15724

GSM3567707 grouping

Sample field · Grouping · Global correction · GSM3567707

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567707
sample_title: 15724-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15724

GSM3567707 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567707

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567707
sample_title: 15724-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15724

GSM3567708 grouping

Sample field · Grouping · Global correction · GSM3567708

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM3567708
sample_title: 16059-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 16059

GSM3567708 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567708

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM3567708
sample_title: 16059-N
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 16059

GSM3567709 grouping

Sample field · Grouping · Global correction · GSM3567709

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM3567709
sample_title: 16059-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 16059

GSM3567709 exclusion decision

Sample field · Sample exclusion · Global correction · GSM3567709

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM3567709
sample_title: 16059-T
source_name: Skin
characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 16059

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession: GSE125285
Sample records: 70 GSM samples

GEO has priority for original metadata under the Phase 3J source rules.
Processed data: available.
Raw data: available.
No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession: GSE125285

No recount3 project identifier has been imported for this dataset.
Once imported, recount3 has priority for processed count availability.
The recount3 source filter excludes this dataset until that linkage exists.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession: GSE125285

No Expression Atlas experiment identifier has been imported for this dataset.
Once imported, Expression Atlas has priority for curated expression experiment links.
The Expression Atlas source filter excludes this dataset until that linkage exists.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession: GSE125285

No PubMed identifier is present in the current runtime metadata.
No live PubMed search is performed from the dataset detail page.

Dataset Feedback

0 stored

No project feedback stored for this dataset.

Original GEO Metadata

dataset_accession: GSE125285
dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2019-01-17
last_update_date: 2021-05-20
organization_name: Indiana University School of Public Health
department: Department of Epidemiology
public_date: 2020-05-08
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL11154 Illumina HiSeq 2000 (Homo sapiens)
sub_series: Not available
bioproject: PRJNA515744
supplementary_files: TXT: GSE125285_S35_log2GE.txt.gz
series_type: Series

Why It Matched

Tumor vs matched normal · Tissue · suitability 0%.
Prioritized for patient tissue tumor-vs-normal triage.
Prioritized assay: bulk RNA-seq is the active assay expectation.
Downgraded disease context: not a colorectal/GI cancer cohort.
Processed data is available for downstream review.
1 warning require review.

Why It May Not Be Suitable

Disease or condition label could not be normalized.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized.
Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.
Downgraded disease context: not a colorectal/GI cancer cohort.
Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

warning DISEASE_LABEL_UNCLEAR Disease or condition label could not be normalized.

Normalized Fields

212 fields

Field Value Source Origin Confidence Evidence Reason

assay_type bulk RNA-seq dataset GSE125285 Runtime Siftome inference GEO:dataset:GSE125285:8cf711e6aa332fddffd1eec1460ded0dae8414d3ac948730c4e4129081d3ef39 high confidence bulk rna-seq dataset_accession: GSE125285 dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas organism: Homo sapiens assay_type: bulk... keyword match keyword match: bulk rna-seq

normal_tissue_type adjacent normal sample GSM3567640 Runtime Siftome inference GEO:sample:GSM3567640:4263a5a4885138b9198432a384ccb1222dfd5c8af6ffa23ce83e579891add5f1 high confidence normal adjacent sample_accession: GSM3567640 sample_title: 14473-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1447... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567642 Runtime Siftome inference GEO:sample:GSM3567642:126fbb7df7a0557cfba9c5aa09e038271adb1cb1482915e9d5193be03775d57c high confidence normal adjacent sample_accession: GSM3567642 sample_title: 14476-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1447... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567644 Runtime Siftome inference GEO:sample:GSM3567644:5207518f888c227f564427d5fa3ccf372b10471b50fe7398a88839b6a24c10ea high confidence normal adjacent sample_accession: GSM3567644 sample_title: 14487-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1448... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567646 Runtime Siftome inference GEO:sample:GSM3567646:88f3c72591858a8d6ef6d3808463376fe0b7530cbb012d5b4ee259645a960a90 high confidence normal adjacent sample_accession: GSM3567646 sample_title: 14522-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1452... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567648 Runtime Siftome inference GEO:sample:GSM3567648:c62ae5bfe9232495e566ef8a6fd2d1e34e046da220899b0f8bb7d1625908defc high confidence normal adjacent sample_accession: GSM3567648 sample_title: 14630-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1463... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567650 Runtime Siftome inference GEO:sample:GSM3567650:a9e649bc862cdd0f4111c8e4a929893c501282875dfcd469ddf616fff3d04340 high confidence normal adjacent sample_accession: GSM3567650 sample_title: 14644-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1464... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567652 Runtime Siftome inference GEO:sample:GSM3567652:a318bf8269f2459a161b76c9574858e8f397d0b66b1be8a68ac0ddebb628e8b0 high confidence normal adjacent sample_accession: GSM3567652 sample_title: 14666-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1466... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567654 Runtime Siftome inference GEO:sample:GSM3567654:0200ef1b5958000cd13395c976446cb599aa6f7acd039f02321e3f5b7b929d4b high confidence normal adjacent sample_accession: GSM3567654 sample_title: 14688-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1468... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567656 Runtime Siftome inference GEO:sample:GSM3567656:94beb6e45700b9b4baddfd206919143503c6c19612dec7586caf5a0f35a811cb high confidence normal adjacent sample_accession: GSM3567656 sample_title: 15047-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1504... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567658 Runtime Siftome inference GEO:sample:GSM3567658:edb7f8dcf3ee5b48d9af0a60127b4f09499e44e63ef844aef11baa141b681c17 high confidence normal adjacent sample_accession: GSM3567658 sample_title: 15318-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1531... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567660 Runtime Siftome inference GEO:sample:GSM3567660:a973a2041a41c1bee6bec8bd461af65b84a92061a4f334d0e7bd61c4c850fdee high confidence normal adjacent sample_accession: GSM3567660 sample_title: 15360-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1536... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567662 Runtime Siftome inference GEO:sample:GSM3567662:1561821ea02769a929c6737d2eeeb701c9c3966f770653686ce13d48afa09bff high confidence normal adjacent sample_accession: GSM3567662 sample_title: 15372-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1537... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567664 Runtime Siftome inference GEO:sample:GSM3567664:035443ffd3d630f367de3753a9bac2419e53a478c37774d1c3bba0136fd7631a high confidence normal adjacent sample_accession: GSM3567664 sample_title: 15392-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1539... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567666 Runtime Siftome inference GEO:sample:GSM3567666:ca257bb1c9c9620670cbcbd048149fe9bab3c8793783e3c6c91775c1780df977 high confidence normal adjacent sample_accession: GSM3567666 sample_title: 15409-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1540... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567668 Runtime Siftome inference GEO:sample:GSM3567668:be05f1f4e0ce96c8ba5ad67ddc71002156a66921d19a1cec3631129873721d6a high confidence normal adjacent sample_accession: GSM3567668 sample_title: 15416-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1541... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567670 Runtime Siftome inference GEO:sample:GSM3567670:33cbdea2d49d2a63863bbc358f2a6cbcbb520bc3966137d77665b0737a35f9a9 high confidence normal adjacent sample_accession: GSM3567670 sample_title: 15472-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1547... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567672 Runtime Siftome inference GEO:sample:GSM3567672:9bb923bc1cbd8c3a4fd56064441d4d2757d01738824c3baaacdf57f710e54311 high confidence normal adjacent sample_accession: GSM3567672 sample_title: 15484-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1548... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567674 Runtime Siftome inference GEO:sample:GSM3567674:d41934d761eeeba297aff1982fa2742f760827d4a498bea1c4550003ceabbd77 high confidence normal adjacent sample_accession: GSM3567674 sample_title: 15514-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1551... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567676 Runtime Siftome inference GEO:sample:GSM3567676:21828c71c705744035e01e925c833b828c53984994f51b9deb6ac50ff6fad0ea high confidence normal adjacent sample_accession: GSM3567676 sample_title: 15706-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1570... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567678 Runtime Siftome inference GEO:sample:GSM3567678:34c9d7a31debfc36f71e95f7e5395e975727d5f7bb200b7ad0777aef893cc6bd high confidence normal adjacent sample_accession: GSM3567678 sample_title: 15714-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1571... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567680 Runtime Siftome inference GEO:sample:GSM3567680:5b46cb979598c7a9a02f1bdadc65a75c3abb111d843295dc9aacb3a507e59f6a high confidence normal adjacent sample_accession: GSM3567680 sample_title: 15715-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1571... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567682 Runtime Siftome inference GEO:sample:GSM3567682:89b40acf90384c8d9ddadc56f131db130eb20e7e3141a2e694739418c0691a2e high confidence normal adjacent sample_accession: GSM3567682 sample_title: 15797-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1579... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567684 Runtime Siftome inference GEO:sample:GSM3567684:4661828ea94409b2e82c2b14776aca80edc054a86db2d654bee868ce293ef1f9 high confidence normal adjacent sample_accession: GSM3567684 sample_title: 16037-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1603... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567686 Runtime Siftome inference GEO:sample:GSM3567686:7c691ed8dcb56cd7935228443fadd2fce703d4a97cd417d50eb328f9a640ee24 high confidence normal adjacent sample_accession: GSM3567686 sample_title: 16072-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1607... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567688 Runtime Siftome inference GEO:sample:GSM3567688:64c85517e51f5e87c2d0d1117709bb9492c5db55340f16070c86e76ec6c0eb94 high confidence normal adjacent sample_accession: GSM3567688 sample_title: 16111-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1611... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567690 Runtime Siftome inference GEO:sample:GSM3567690:4bf37fc6ca1c75b3019f810b314a4b7901fa763ed8ad44e1a7c3c7ab1d1745fe high confidence normal adjacent sample_accession: GSM3567690 sample_title: 14478-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567692 Runtime Siftome inference GEO:sample:GSM3567692:178804131fcfcd637bbc2c8d19df4b16f63633e7f23b287c9799194a8c2d13fd high confidence normal adjacent sample_accession: GSM3567692 sample_title: 14672-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567694 Runtime Siftome inference GEO:sample:GSM3567694:79d459af2c2bb7389e34b8f12a00faf7e86c3734170affdce1b785fe2dd24cc6 high confidence normal adjacent sample_accession: GSM3567694 sample_title: 15179-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567696 Runtime Siftome inference GEO:sample:GSM3567696:32261b03ce231af6e26e5bad28800f526bd6317898264b14508640ef2fbbf762 high confidence normal adjacent sample_accession: GSM3567696 sample_title: 15336-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567698 Runtime Siftome inference GEO:sample:GSM3567698:83f75b80270b8a14edc43ca70eab712fd8e563c1c0a6aa80f170acedc7e921c9 high confidence normal adjacent sample_accession: GSM3567698 sample_title: 15551-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567700 Runtime Siftome inference GEO:sample:GSM3567700:f2db4e6a6f3fb12f786a6f46aece264074eab6db1f630f22dce3a960e603d9ab high confidence normal adjacent sample_accession: GSM3567700 sample_title: 15554-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567702 Runtime Siftome inference GEO:sample:GSM3567702:2fd93c291a64cf6c9fcb21f5cd33f0dba60ee6474235fcd4a8965b02234f5616 high confidence normal adjacent sample_accession: GSM3567702 sample_title: 15678-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567704 Runtime Siftome inference GEO:sample:GSM3567704:5404e7ab10a9db69fc5b2f9f7444a5dab40aa429dd8082f8decc22b705241aa6 high confidence normal adjacent sample_accession: GSM3567704 sample_title: 15685-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567706 Runtime Siftome inference GEO:sample:GSM3567706:72aad1c1e26bf465af3564fe60a2c5df5f8191dc68e0ca7effbb86290ff33fdc high confidence normal adjacent sample_accession: GSM3567706 sample_title: 15724-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

normal_tissue_type adjacent normal sample GSM3567708 Runtime Siftome inference GEO:sample:GSM3567708:9f9932ee0f8657a116580a2287811077a014741530657fc536fcfdfe1e1740ca high confidence normal adjacent sample_accession: GSM3567708 sample_title: 16059-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary normal tissue type match: normal adjacent

organism Homo sapiens dataset GSE125285 Runtime Siftome inference GEO:dataset:GSE125285:8cf711e6aa332fddffd1eec1460ded0dae8414d3ac948730c4e4129081d3ef39 high confidence homo sapiens dataset_accession: GSE125285 dataset_title: Characterizing gene expression patterns in Basal Cell Carcinomas and Squamous Cell Carcinomas organism: Homo sapiens assay_type: bulk... keyword match keyword match: homo sapiens

sample_type normal tissue sample GSM3567640 Runtime Siftome inference GEO:sample:GSM3567640:4263a5a4885138b9198432a384ccb1222dfd5c8af6ffa23ce83e579891add5f1 high confidence normal adjacent sample_accession: GSM3567640 sample_title: 14473-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1447... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567640 Runtime Siftome inference GEO:sample:GSM3567640:4263a5a4885138b9198432a384ccb1222dfd5c8af6ffa23ce83e579891add5f1 medium confidence carcinoma sample_accession: GSM3567640 sample_title: 14473-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1447... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567641 Runtime Siftome inference GEO:sample:GSM3567641:e82dd4f878a07437f81fbb79b00dd3ebdc58e04825629a413c1ef9f89ec6cb01 low confidence tumor sample_accession: GSM3567641 sample_title: 14473-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473 14473-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567642 Runtime Siftome inference GEO:sample:GSM3567642:126fbb7df7a0557cfba9c5aa09e038271adb1cb1482915e9d5193be03775d57c high confidence normal adjacent sample_accession: GSM3567642 sample_title: 14476-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1447... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567642 Runtime Siftome inference GEO:sample:GSM3567642:126fbb7df7a0557cfba9c5aa09e038271adb1cb1482915e9d5193be03775d57c medium confidence carcinoma sample_accession: GSM3567642 sample_title: 14476-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1447... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567643 Runtime Siftome inference GEO:sample:GSM3567643:e5f7fe31605ac20032d01e45c1ebca1546f6bf0a719e470d30f282f9ecfa8fbc low confidence tumor sample_accession: GSM3567643 sample_title: 14476-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476 14476-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567644 Runtime Siftome inference GEO:sample:GSM3567644:5207518f888c227f564427d5fa3ccf372b10471b50fe7398a88839b6a24c10ea high confidence normal adjacent sample_accession: GSM3567644 sample_title: 14487-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1448... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567644 Runtime Siftome inference GEO:sample:GSM3567644:5207518f888c227f564427d5fa3ccf372b10471b50fe7398a88839b6a24c10ea medium confidence carcinoma sample_accession: GSM3567644 sample_title: 14487-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1448... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567645 Runtime Siftome inference GEO:sample:GSM3567645:efc13911f1ee6929b56fd9b1a5aa8d709f1e61d6927d27d280c89a5072d8c637 low confidence tumor sample_accession: GSM3567645 sample_title: 14487-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14487 14487-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567646 Runtime Siftome inference GEO:sample:GSM3567646:88f3c72591858a8d6ef6d3808463376fe0b7530cbb012d5b4ee259645a960a90 high confidence normal adjacent sample_accession: GSM3567646 sample_title: 14522-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1452... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567646 Runtime Siftome inference GEO:sample:GSM3567646:88f3c72591858a8d6ef6d3808463376fe0b7530cbb012d5b4ee259645a960a90 medium confidence carcinoma sample_accession: GSM3567646 sample_title: 14522-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1452... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567647 Runtime Siftome inference GEO:sample:GSM3567647:09181fffb67cceca6caf65c0071cc7e129374a7801f3c10a7ff47f1d8cd73d8a low confidence tumor sample_accession: GSM3567647 sample_title: 14522-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14522 14522-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567648 Runtime Siftome inference GEO:sample:GSM3567648:c62ae5bfe9232495e566ef8a6fd2d1e34e046da220899b0f8bb7d1625908defc high confidence normal adjacent sample_accession: GSM3567648 sample_title: 14630-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1463... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567648 Runtime Siftome inference GEO:sample:GSM3567648:c62ae5bfe9232495e566ef8a6fd2d1e34e046da220899b0f8bb7d1625908defc medium confidence carcinoma sample_accession: GSM3567648 sample_title: 14630-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1463... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567649 Runtime Siftome inference GEO:sample:GSM3567649:b3483e9ba0d7070cb6f167b508b1d30bed11bd0fbd9565ac83d7127dc9aeffdd low confidence tumor sample_accession: GSM3567649 sample_title: 14630-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14630 14630-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567650 Runtime Siftome inference GEO:sample:GSM3567650:a9e649bc862cdd0f4111c8e4a929893c501282875dfcd469ddf616fff3d04340 high confidence normal adjacent sample_accession: GSM3567650 sample_title: 14644-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1464... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567650 Runtime Siftome inference GEO:sample:GSM3567650:a9e649bc862cdd0f4111c8e4a929893c501282875dfcd469ddf616fff3d04340 medium confidence carcinoma sample_accession: GSM3567650 sample_title: 14644-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1464... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567651 Runtime Siftome inference GEO:sample:GSM3567651:f6ac716c82e9cdabd19911be376fbecf6c0f25f0560b7237d88e429180e1733a low confidence tumor sample_accession: GSM3567651 sample_title: 14644-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14644 14644-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567652 Runtime Siftome inference GEO:sample:GSM3567652:a318bf8269f2459a161b76c9574858e8f397d0b66b1be8a68ac0ddebb628e8b0 high confidence normal adjacent sample_accession: GSM3567652 sample_title: 14666-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1466... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567652 Runtime Siftome inference GEO:sample:GSM3567652:a318bf8269f2459a161b76c9574858e8f397d0b66b1be8a68ac0ddebb628e8b0 medium confidence carcinoma sample_accession: GSM3567652 sample_title: 14666-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1466... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567653 Runtime Siftome inference GEO:sample:GSM3567653:176023a2fcdbcd3127c4242f1580a46d40fd8ae4850bed57a41f817d2d752838 low confidence tumor sample_accession: GSM3567653 sample_title: 14666-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14666 14666-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567654 Runtime Siftome inference GEO:sample:GSM3567654:0200ef1b5958000cd13395c976446cb599aa6f7acd039f02321e3f5b7b929d4b high confidence normal adjacent sample_accession: GSM3567654 sample_title: 14688-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1468... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567654 Runtime Siftome inference GEO:sample:GSM3567654:0200ef1b5958000cd13395c976446cb599aa6f7acd039f02321e3f5b7b929d4b medium confidence carcinoma sample_accession: GSM3567654 sample_title: 14688-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1468... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567655 Runtime Siftome inference GEO:sample:GSM3567655:15e2c5d95d03042c7c85d129675b96cb68704fcbbc9af5dbd327c1285a14454d low confidence tumor sample_accession: GSM3567655 sample_title: 14688-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14688 14688-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567656 Runtime Siftome inference GEO:sample:GSM3567656:94beb6e45700b9b4baddfd206919143503c6c19612dec7586caf5a0f35a811cb high confidence normal adjacent sample_accession: GSM3567656 sample_title: 15047-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1504... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567656 Runtime Siftome inference GEO:sample:GSM3567656:94beb6e45700b9b4baddfd206919143503c6c19612dec7586caf5a0f35a811cb medium confidence carcinoma sample_accession: GSM3567656 sample_title: 15047-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1504... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567657 Runtime Siftome inference GEO:sample:GSM3567657:3eef73a60fa105a24908bdad2713bcf8a7eb461eef40f7f453755f93e4c7efad low confidence tumor sample_accession: GSM3567657 sample_title: 15047-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15047 15047-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567658 Runtime Siftome inference GEO:sample:GSM3567658:edb7f8dcf3ee5b48d9af0a60127b4f09499e44e63ef844aef11baa141b681c17 high confidence normal adjacent sample_accession: GSM3567658 sample_title: 15318-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1531... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567658 Runtime Siftome inference GEO:sample:GSM3567658:edb7f8dcf3ee5b48d9af0a60127b4f09499e44e63ef844aef11baa141b681c17 medium confidence carcinoma sample_accession: GSM3567658 sample_title: 15318-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1531... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567659 Runtime Siftome inference GEO:sample:GSM3567659:0d32d07c2dabb218122f8fd474a6eed4e8c2ee6065a720bdbd18738ae19649aa low confidence tumor sample_accession: GSM3567659 sample_title: 15318-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15318 15318-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567660 Runtime Siftome inference GEO:sample:GSM3567660:a973a2041a41c1bee6bec8bd461af65b84a92061a4f334d0e7bd61c4c850fdee high confidence normal adjacent sample_accession: GSM3567660 sample_title: 15360-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1536... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567660 Runtime Siftome inference GEO:sample:GSM3567660:a973a2041a41c1bee6bec8bd461af65b84a92061a4f334d0e7bd61c4c850fdee medium confidence carcinoma sample_accession: GSM3567660 sample_title: 15360-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1536... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567661 Runtime Siftome inference GEO:sample:GSM3567661:fed495d3510abcd05f44b32e213d4664aa239d670c54a1aba5206c3c6c98d2bc low confidence tumor sample_accession: GSM3567661 sample_title: 15360-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15360 15360-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567662 Runtime Siftome inference GEO:sample:GSM3567662:1561821ea02769a929c6737d2eeeb701c9c3966f770653686ce13d48afa09bff high confidence normal adjacent sample_accession: GSM3567662 sample_title: 15372-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1537... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567662 Runtime Siftome inference GEO:sample:GSM3567662:1561821ea02769a929c6737d2eeeb701c9c3966f770653686ce13d48afa09bff medium confidence carcinoma sample_accession: GSM3567662 sample_title: 15372-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1537... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567663 Runtime Siftome inference GEO:sample:GSM3567663:9aa4332c8850212ed2784dd86e186ef99c04a79d5107e2a8beeee1232aabbea2 low confidence tumor sample_accession: GSM3567663 sample_title: 15372-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15372 15372-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567664 Runtime Siftome inference GEO:sample:GSM3567664:035443ffd3d630f367de3753a9bac2419e53a478c37774d1c3bba0136fd7631a high confidence normal adjacent sample_accession: GSM3567664 sample_title: 15392-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1539... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567664 Runtime Siftome inference GEO:sample:GSM3567664:035443ffd3d630f367de3753a9bac2419e53a478c37774d1c3bba0136fd7631a medium confidence carcinoma sample_accession: GSM3567664 sample_title: 15392-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1539... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567665 Runtime Siftome inference GEO:sample:GSM3567665:2551beafff997ac0801e34e526bc0c92f3a01e56a627a5e2306da2e2afc3d923 low confidence tumor sample_accession: GSM3567665 sample_title: 15392-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15392 15392-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567666 Runtime Siftome inference GEO:sample:GSM3567666:ca257bb1c9c9620670cbcbd048149fe9bab3c8793783e3c6c91775c1780df977 high confidence normal adjacent sample_accession: GSM3567666 sample_title: 15409-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1540... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567666 Runtime Siftome inference GEO:sample:GSM3567666:ca257bb1c9c9620670cbcbd048149fe9bab3c8793783e3c6c91775c1780df977 medium confidence carcinoma sample_accession: GSM3567666 sample_title: 15409-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1540... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567667 Runtime Siftome inference GEO:sample:GSM3567667:b48410ee80056c4c02a67445fb35212bb9685e64bddf585cc92e68fed7f553f5 low confidence tumor sample_accession: GSM3567667 sample_title: 15409-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15409 15409-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567668 Runtime Siftome inference GEO:sample:GSM3567668:be05f1f4e0ce96c8ba5ad67ddc71002156a66921d19a1cec3631129873721d6a high confidence normal adjacent sample_accession: GSM3567668 sample_title: 15416-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1541... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567668 Runtime Siftome inference GEO:sample:GSM3567668:be05f1f4e0ce96c8ba5ad67ddc71002156a66921d19a1cec3631129873721d6a medium confidence carcinoma sample_accession: GSM3567668 sample_title: 15416-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1541... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567669 Runtime Siftome inference GEO:sample:GSM3567669:49eb815322b898c144f6e578c85a7315048a4e7f98418c4344ca49fc9803a33d low confidence tumor sample_accession: GSM3567669 sample_title: 15416-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15416 15416-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567670 Runtime Siftome inference GEO:sample:GSM3567670:33cbdea2d49d2a63863bbc358f2a6cbcbb520bc3966137d77665b0737a35f9a9 high confidence normal adjacent sample_accession: GSM3567670 sample_title: 15472-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1547... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567670 Runtime Siftome inference GEO:sample:GSM3567670:33cbdea2d49d2a63863bbc358f2a6cbcbb520bc3966137d77665b0737a35f9a9 medium confidence carcinoma sample_accession: GSM3567670 sample_title: 15472-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1547... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567671 Runtime Siftome inference GEO:sample:GSM3567671:6bff11c9d21c265a540710d96de4cd73b4ade0810e4058b3148eabeb044bff93 low confidence tumor sample_accession: GSM3567671 sample_title: 15472-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15472 15472-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567672 Runtime Siftome inference GEO:sample:GSM3567672:9bb923bc1cbd8c3a4fd56064441d4d2757d01738824c3baaacdf57f710e54311 high confidence normal adjacent sample_accession: GSM3567672 sample_title: 15484-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1548... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567672 Runtime Siftome inference GEO:sample:GSM3567672:9bb923bc1cbd8c3a4fd56064441d4d2757d01738824c3baaacdf57f710e54311 medium confidence carcinoma sample_accession: GSM3567672 sample_title: 15484-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1548... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567673 Runtime Siftome inference GEO:sample:GSM3567673:9a2bbd9aaf60b0fba72f3a0ed43617bb65cf0c11f4f754f6905ad447bef2bb24 low confidence tumor sample_accession: GSM3567673 sample_title: 15484-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15484 15484-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567674 Runtime Siftome inference GEO:sample:GSM3567674:d41934d761eeeba297aff1982fa2742f760827d4a498bea1c4550003ceabbd77 high confidence normal adjacent sample_accession: GSM3567674 sample_title: 15514-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1551... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567674 Runtime Siftome inference GEO:sample:GSM3567674:d41934d761eeeba297aff1982fa2742f760827d4a498bea1c4550003ceabbd77 medium confidence carcinoma sample_accession: GSM3567674 sample_title: 15514-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1551... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567675 Runtime Siftome inference GEO:sample:GSM3567675:dc116b30a7407c2fd9ad3db1846c735163aaef57ed833e7ee11aa83fef3fbda1 low confidence tumor sample_accession: GSM3567675 sample_title: 15514-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15514 15514-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567676 Runtime Siftome inference GEO:sample:GSM3567676:21828c71c705744035e01e925c833b828c53984994f51b9deb6ac50ff6fad0ea high confidence normal adjacent sample_accession: GSM3567676 sample_title: 15706-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1570... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567676 Runtime Siftome inference GEO:sample:GSM3567676:21828c71c705744035e01e925c833b828c53984994f51b9deb6ac50ff6fad0ea medium confidence carcinoma sample_accession: GSM3567676 sample_title: 15706-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1570... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567677 Runtime Siftome inference GEO:sample:GSM3567677:0cc37df45be9f153d37d72e81669bcf2608b49f95657e1fcf10d48e84227628a low confidence tumor sample_accession: GSM3567677 sample_title: 15706-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15706 15706-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567678 Runtime Siftome inference GEO:sample:GSM3567678:34c9d7a31debfc36f71e95f7e5395e975727d5f7bb200b7ad0777aef893cc6bd high confidence normal adjacent sample_accession: GSM3567678 sample_title: 15714-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1571... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567678 Runtime Siftome inference GEO:sample:GSM3567678:34c9d7a31debfc36f71e95f7e5395e975727d5f7bb200b7ad0777aef893cc6bd medium confidence carcinoma sample_accession: GSM3567678 sample_title: 15714-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1571... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567679 Runtime Siftome inference GEO:sample:GSM3567679:57f7b9f04e7d22e51add976bae2b16ba8feda2c470cfff1a2947348df28764a7 low confidence tumor sample_accession: GSM3567679 sample_title: 15714-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15714 15714-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567680 Runtime Siftome inference GEO:sample:GSM3567680:5b46cb979598c7a9a02f1bdadc65a75c3abb111d843295dc9aacb3a507e59f6a high confidence normal adjacent sample_accession: GSM3567680 sample_title: 15715-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1571... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567680 Runtime Siftome inference GEO:sample:GSM3567680:5b46cb979598c7a9a02f1bdadc65a75c3abb111d843295dc9aacb3a507e59f6a medium confidence carcinoma sample_accession: GSM3567680 sample_title: 15715-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1571... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567681 Runtime Siftome inference GEO:sample:GSM3567681:450831df1a990ea80183c1cb94671ccb574c1de5ea13b2f94f231568c0aefb65 low confidence tumor sample_accession: GSM3567681 sample_title: 15715-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15715 15715-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567682 Runtime Siftome inference GEO:sample:GSM3567682:89b40acf90384c8d9ddadc56f131db130eb20e7e3141a2e694739418c0691a2e high confidence normal adjacent sample_accession: GSM3567682 sample_title: 15797-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1579... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567682 Runtime Siftome inference GEO:sample:GSM3567682:89b40acf90384c8d9ddadc56f131db130eb20e7e3141a2e694739418c0691a2e medium confidence carcinoma sample_accession: GSM3567682 sample_title: 15797-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1579... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567683 Runtime Siftome inference GEO:sample:GSM3567683:e7d1e085f8f3a9fbaf3ae7bbf0de0f57fca825c3b2f3a3fe2a20720916cff87f low confidence tumor sample_accession: GSM3567683 sample_title: 15797-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15797 15797-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567684 Runtime Siftome inference GEO:sample:GSM3567684:4661828ea94409b2e82c2b14776aca80edc054a86db2d654bee868ce293ef1f9 high confidence normal adjacent sample_accession: GSM3567684 sample_title: 16037-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1603... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567684 Runtime Siftome inference GEO:sample:GSM3567684:4661828ea94409b2e82c2b14776aca80edc054a86db2d654bee868ce293ef1f9 medium confidence carcinoma sample_accession: GSM3567684 sample_title: 16037-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1603... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567685 Runtime Siftome inference GEO:sample:GSM3567685:7add43d3a53e8f8b5559879e5563c1b4a61381748fb7322bcce7cd86ab42cf48 low confidence tumor sample_accession: GSM3567685 sample_title: 16037-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16037 16037-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567686 Runtime Siftome inference GEO:sample:GSM3567686:7c691ed8dcb56cd7935228443fadd2fce703d4a97cd417d50eb328f9a640ee24 high confidence normal adjacent sample_accession: GSM3567686 sample_title: 16072-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1607... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567686 Runtime Siftome inference GEO:sample:GSM3567686:7c691ed8dcb56cd7935228443fadd2fce703d4a97cd417d50eb328f9a640ee24 medium confidence carcinoma sample_accession: GSM3567686 sample_title: 16072-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1607... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567687 Runtime Siftome inference GEO:sample:GSM3567687:7c602984cea2b8399e41224eb4b742f1deef094ac54135be91c23738162a26d4 low confidence tumor sample_accession: GSM3567687 sample_title: 16072-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16072 16072-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567688 Runtime Siftome inference GEO:sample:GSM3567688:64c85517e51f5e87c2d0d1117709bb9492c5db55340f16070c86e76ec6c0eb94 high confidence normal adjacent sample_accession: GSM3567688 sample_title: 16111-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1611... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567688 Runtime Siftome inference GEO:sample:GSM3567688:64c85517e51f5e87c2d0d1117709bb9492c5db55340f16070c86e76ec6c0eb94 medium confidence carcinoma sample_accession: GSM3567688 sample_title: 16111-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1611... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567689 Runtime Siftome inference GEO:sample:GSM3567689:8bc81612e241a0c16940b9a535fdebd8ae4d036f5b8ae6e88ddef2c31150b49f low confidence tumor sample_accession: GSM3567689 sample_title: 16111-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16111 16111-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567690 Runtime Siftome inference GEO:sample:GSM3567690:4bf37fc6ca1c75b3019f810b314a4b7901fa763ed8ad44e1a7c3c7ab1d1745fe high confidence normal adjacent sample_accession: GSM3567690 sample_title: 14478-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567690 Runtime Siftome inference GEO:sample:GSM3567690:4bf37fc6ca1c75b3019f810b314a4b7901fa763ed8ad44e1a7c3c7ab1d1745fe medium confidence carcinoma sample_accession: GSM3567690 sample_title: 14478-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567691 Runtime Siftome inference GEO:sample:GSM3567691:ca984a297fd512df3846aade59c63d801515aeeb01d9ed0ce359063d5d87bbf7 low confidence tumor sample_accession: GSM3567691 sample_title: 14478-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14478 14478-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567692 Runtime Siftome inference GEO:sample:GSM3567692:178804131fcfcd637bbc2c8d19df4b16f63633e7f23b287c9799194a8c2d13fd high confidence normal adjacent sample_accession: GSM3567692 sample_title: 14672-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567692 Runtime Siftome inference GEO:sample:GSM3567692:178804131fcfcd637bbc2c8d19df4b16f63633e7f23b287c9799194a8c2d13fd medium confidence carcinoma sample_accession: GSM3567692 sample_title: 14672-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567693 Runtime Siftome inference GEO:sample:GSM3567693:a01d59b25e0d36d6a6b0567b9d62950961bb441990fc8490ba471fbff38938c5 low confidence tumor sample_accession: GSM3567693 sample_title: 14672-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14672 14672-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567694 Runtime Siftome inference GEO:sample:GSM3567694:79d459af2c2bb7389e34b8f12a00faf7e86c3734170affdce1b785fe2dd24cc6 high confidence normal adjacent sample_accession: GSM3567694 sample_title: 15179-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567694 Runtime Siftome inference GEO:sample:GSM3567694:79d459af2c2bb7389e34b8f12a00faf7e86c3734170affdce1b785fe2dd24cc6 medium confidence carcinoma sample_accession: GSM3567694 sample_title: 15179-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567695 Runtime Siftome inference GEO:sample:GSM3567695:d342471276a6192f86fc83099e7b8aa4a2f201584f5678a007af480503c13ea7 low confidence tumor sample_accession: GSM3567695 sample_title: 15179-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15179 15179-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567696 Runtime Siftome inference GEO:sample:GSM3567696:32261b03ce231af6e26e5bad28800f526bd6317898264b14508640ef2fbbf762 high confidence normal adjacent sample_accession: GSM3567696 sample_title: 15336-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567696 Runtime Siftome inference GEO:sample:GSM3567696:32261b03ce231af6e26e5bad28800f526bd6317898264b14508640ef2fbbf762 medium confidence carcinoma sample_accession: GSM3567696 sample_title: 15336-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567697 Runtime Siftome inference GEO:sample:GSM3567697:ac126c47a67cbe402816721a3c52707d5cf4201f3f3f90335530dffc3d3577e2 low confidence tumor sample_accession: GSM3567697 sample_title: 15336-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15336 15336-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567698 Runtime Siftome inference GEO:sample:GSM3567698:83f75b80270b8a14edc43ca70eab712fd8e563c1c0a6aa80f170acedc7e921c9 high confidence normal adjacent sample_accession: GSM3567698 sample_title: 15551-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567698 Runtime Siftome inference GEO:sample:GSM3567698:83f75b80270b8a14edc43ca70eab712fd8e563c1c0a6aa80f170acedc7e921c9 medium confidence carcinoma sample_accession: GSM3567698 sample_title: 15551-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567699 Runtime Siftome inference GEO:sample:GSM3567699:2761c9b63ff7b6416bbb5f3c21e322a43318f0f7581165e1d737e7dc1e751fad low confidence tumor sample_accession: GSM3567699 sample_title: 15551-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15551 15551-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567700 Runtime Siftome inference GEO:sample:GSM3567700:f2db4e6a6f3fb12f786a6f46aece264074eab6db1f630f22dce3a960e603d9ab high confidence normal adjacent sample_accession: GSM3567700 sample_title: 15554-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567700 Runtime Siftome inference GEO:sample:GSM3567700:f2db4e6a6f3fb12f786a6f46aece264074eab6db1f630f22dce3a960e603d9ab medium confidence carcinoma sample_accession: GSM3567700 sample_title: 15554-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567701 Runtime Siftome inference GEO:sample:GSM3567701:adc153f2a9c67bd59de0e9032aafb2f9e9f3530ce4325cf3610980e349fd11cc low confidence tumor sample_accession: GSM3567701 sample_title: 15554-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15554 15554-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567702 Runtime Siftome inference GEO:sample:GSM3567702:2fd93c291a64cf6c9fcb21f5cd33f0dba60ee6474235fcd4a8965b02234f5616 high confidence normal adjacent sample_accession: GSM3567702 sample_title: 15678-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567702 Runtime Siftome inference GEO:sample:GSM3567702:2fd93c291a64cf6c9fcb21f5cd33f0dba60ee6474235fcd4a8965b02234f5616 medium confidence carcinoma sample_accession: GSM3567702 sample_title: 15678-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567703 Runtime Siftome inference GEO:sample:GSM3567703:25a1532b056e1c357b0ac9f5de768b3a9b57fc8eba6f0cc1e60de9436b58a36c low confidence tumor sample_accession: GSM3567703 sample_title: 15678-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15678 15678-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567704 Runtime Siftome inference GEO:sample:GSM3567704:5404e7ab10a9db69fc5b2f9f7444a5dab40aa429dd8082f8decc22b705241aa6 high confidence normal adjacent sample_accession: GSM3567704 sample_title: 15685-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567704 Runtime Siftome inference GEO:sample:GSM3567704:5404e7ab10a9db69fc5b2f9f7444a5dab40aa429dd8082f8decc22b705241aa6 medium confidence carcinoma sample_accession: GSM3567704 sample_title: 15685-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567705 Runtime Siftome inference GEO:sample:GSM3567705:d1cc330c2f68ef146fdef317a392de2edc7918466cea5e65d936a547ba3da8ed low confidence tumor sample_accession: GSM3567705 sample_title: 15685-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15685 15685-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567706 Runtime Siftome inference GEO:sample:GSM3567706:72aad1c1e26bf465af3564fe60a2c5df5f8191dc68e0ca7effbb86290ff33fdc high confidence normal adjacent sample_accession: GSM3567706 sample_title: 15724-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567706 Runtime Siftome inference GEO:sample:GSM3567706:72aad1c1e26bf465af3564fe60a2c5df5f8191dc68e0ca7effbb86290ff33fdc medium confidence carcinoma sample_accession: GSM3567706 sample_title: 15724-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567707 Runtime Siftome inference GEO:sample:GSM3567707:4ab370881da84a29048cdd670ad314d3673a7845b48048ef1408616a5f9749b9 low confidence tumor sample_accession: GSM3567707 sample_title: 15724-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15724 15724-T controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM3567708 Runtime Siftome inference GEO:sample:GSM3567708:9f9932ee0f8657a116580a2287811077a014741530657fc536fcfdfe1e1740ca high confidence normal adjacent sample_accession: GSM3567708 sample_title: 16059-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: normal adjacent

sample_type tumor sample sample GSM3567708 Runtime Siftome inference GEO:sample:GSM3567708:9f9932ee0f8657a116580a2287811077a014741530657fc536fcfdfe1e1740ca medium confidence carcinoma sample_accession: GSM3567708 sample_title: 16059-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary sample type match: carcinoma

sample_type tumor sample sample GSM3567709 Runtime Siftome inference GEO:sample:GSM3567709:ac27fa854f9d80dea51f5cf1d506db41d24fa598d480affd16524f74f8d2b660 low confidence tumor sample_accession: GSM3567709 sample_title: 16059-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 16059 16059-T controlled vocabulary controlled vocabulary sample type match: tumor

tissue skin sample GSM3567640 Runtime Siftome inference GEO:sample:GSM3567640:4263a5a4885138b9198432a384ccb1222dfd5c8af6ffa23ce83e579891add5f1 low confidence skin sample_accession: GSM3567640 sample_title: 14473-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1447... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567641 Runtime Siftome inference GEO:sample:GSM3567641:e82dd4f878a07437f81fbb79b00dd3ebdc58e04825629a413c1ef9f89ec6cb01 low confidence skin sample_accession: GSM3567641 sample_title: 14473-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473 14473-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567642 Runtime Siftome inference GEO:sample:GSM3567642:126fbb7df7a0557cfba9c5aa09e038271adb1cb1482915e9d5193be03775d57c low confidence skin sample_accession: GSM3567642 sample_title: 14476-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1447... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567643 Runtime Siftome inference GEO:sample:GSM3567643:e5f7fe31605ac20032d01e45c1ebca1546f6bf0a719e470d30f282f9ecfa8fbc low confidence skin sample_accession: GSM3567643 sample_title: 14476-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476 14476-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567644 Runtime Siftome inference GEO:sample:GSM3567644:5207518f888c227f564427d5fa3ccf372b10471b50fe7398a88839b6a24c10ea low confidence skin sample_accession: GSM3567644 sample_title: 14487-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1448... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567645 Runtime Siftome inference GEO:sample:GSM3567645:efc13911f1ee6929b56fd9b1a5aa8d709f1e61d6927d27d280c89a5072d8c637 low confidence skin sample_accession: GSM3567645 sample_title: 14487-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14487 14487-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567646 Runtime Siftome inference GEO:sample:GSM3567646:88f3c72591858a8d6ef6d3808463376fe0b7530cbb012d5b4ee259645a960a90 low confidence skin sample_accession: GSM3567646 sample_title: 14522-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1452... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567647 Runtime Siftome inference GEO:sample:GSM3567647:09181fffb67cceca6caf65c0071cc7e129374a7801f3c10a7ff47f1d8cd73d8a low confidence skin sample_accession: GSM3567647 sample_title: 14522-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14522 14522-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567648 Runtime Siftome inference GEO:sample:GSM3567648:c62ae5bfe9232495e566ef8a6fd2d1e34e046da220899b0f8bb7d1625908defc low confidence skin sample_accession: GSM3567648 sample_title: 14630-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1463... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567649 Runtime Siftome inference GEO:sample:GSM3567649:b3483e9ba0d7070cb6f167b508b1d30bed11bd0fbd9565ac83d7127dc9aeffdd low confidence skin sample_accession: GSM3567649 sample_title: 14630-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14630 14630-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567650 Runtime Siftome inference GEO:sample:GSM3567650:a9e649bc862cdd0f4111c8e4a929893c501282875dfcd469ddf616fff3d04340 low confidence skin sample_accession: GSM3567650 sample_title: 14644-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1464... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567651 Runtime Siftome inference GEO:sample:GSM3567651:f6ac716c82e9cdabd19911be376fbecf6c0f25f0560b7237d88e429180e1733a low confidence skin sample_accession: GSM3567651 sample_title: 14644-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14644 14644-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567652 Runtime Siftome inference GEO:sample:GSM3567652:a318bf8269f2459a161b76c9574858e8f397d0b66b1be8a68ac0ddebb628e8b0 low confidence skin sample_accession: GSM3567652 sample_title: 14666-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1466... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567653 Runtime Siftome inference GEO:sample:GSM3567653:176023a2fcdbcd3127c4242f1580a46d40fd8ae4850bed57a41f817d2d752838 low confidence skin sample_accession: GSM3567653 sample_title: 14666-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14666 14666-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567654 Runtime Siftome inference GEO:sample:GSM3567654:0200ef1b5958000cd13395c976446cb599aa6f7acd039f02321e3f5b7b929d4b low confidence skin sample_accession: GSM3567654 sample_title: 14688-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1468... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567655 Runtime Siftome inference GEO:sample:GSM3567655:15e2c5d95d03042c7c85d129675b96cb68704fcbbc9af5dbd327c1285a14454d low confidence skin sample_accession: GSM3567655 sample_title: 14688-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14688 14688-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567656 Runtime Siftome inference GEO:sample:GSM3567656:94beb6e45700b9b4baddfd206919143503c6c19612dec7586caf5a0f35a811cb low confidence skin sample_accession: GSM3567656 sample_title: 15047-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1504... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567657 Runtime Siftome inference GEO:sample:GSM3567657:3eef73a60fa105a24908bdad2713bcf8a7eb461eef40f7f453755f93e4c7efad low confidence skin sample_accession: GSM3567657 sample_title: 15047-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15047 15047-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567658 Runtime Siftome inference GEO:sample:GSM3567658:edb7f8dcf3ee5b48d9af0a60127b4f09499e44e63ef844aef11baa141b681c17 low confidence skin sample_accession: GSM3567658 sample_title: 15318-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1531... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567659 Runtime Siftome inference GEO:sample:GSM3567659:0d32d07c2dabb218122f8fd474a6eed4e8c2ee6065a720bdbd18738ae19649aa low confidence skin sample_accession: GSM3567659 sample_title: 15318-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15318 15318-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567660 Runtime Siftome inference GEO:sample:GSM3567660:a973a2041a41c1bee6bec8bd461af65b84a92061a4f334d0e7bd61c4c850fdee low confidence skin sample_accession: GSM3567660 sample_title: 15360-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1536... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567661 Runtime Siftome inference GEO:sample:GSM3567661:fed495d3510abcd05f44b32e213d4664aa239d670c54a1aba5206c3c6c98d2bc low confidence skin sample_accession: GSM3567661 sample_title: 15360-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15360 15360-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567662 Runtime Siftome inference GEO:sample:GSM3567662:1561821ea02769a929c6737d2eeeb701c9c3966f770653686ce13d48afa09bff low confidence skin sample_accession: GSM3567662 sample_title: 15372-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1537... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567663 Runtime Siftome inference GEO:sample:GSM3567663:9aa4332c8850212ed2784dd86e186ef99c04a79d5107e2a8beeee1232aabbea2 low confidence skin sample_accession: GSM3567663 sample_title: 15372-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15372 15372-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567664 Runtime Siftome inference GEO:sample:GSM3567664:035443ffd3d630f367de3753a9bac2419e53a478c37774d1c3bba0136fd7631a low confidence skin sample_accession: GSM3567664 sample_title: 15392-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1539... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567665 Runtime Siftome inference GEO:sample:GSM3567665:2551beafff997ac0801e34e526bc0c92f3a01e56a627a5e2306da2e2afc3d923 low confidence skin sample_accession: GSM3567665 sample_title: 15392-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15392 15392-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567666 Runtime Siftome inference GEO:sample:GSM3567666:ca257bb1c9c9620670cbcbd048149fe9bab3c8793783e3c6c91775c1780df977 low confidence skin sample_accession: GSM3567666 sample_title: 15409-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1540... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567667 Runtime Siftome inference GEO:sample:GSM3567667:b48410ee80056c4c02a67445fb35212bb9685e64bddf585cc92e68fed7f553f5 low confidence skin sample_accession: GSM3567667 sample_title: 15409-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15409 15409-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567668 Runtime Siftome inference GEO:sample:GSM3567668:be05f1f4e0ce96c8ba5ad67ddc71002156a66921d19a1cec3631129873721d6a low confidence skin sample_accession: GSM3567668 sample_title: 15416-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1541... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567669 Runtime Siftome inference GEO:sample:GSM3567669:49eb815322b898c144f6e578c85a7315048a4e7f98418c4344ca49fc9803a33d low confidence skin sample_accession: GSM3567669 sample_title: 15416-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15416 15416-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567670 Runtime Siftome inference GEO:sample:GSM3567670:33cbdea2d49d2a63863bbc358f2a6cbcbb520bc3966137d77665b0737a35f9a9 low confidence skin sample_accession: GSM3567670 sample_title: 15472-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1547... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567671 Runtime Siftome inference GEO:sample:GSM3567671:6bff11c9d21c265a540710d96de4cd73b4ade0810e4058b3148eabeb044bff93 low confidence skin sample_accession: GSM3567671 sample_title: 15472-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15472 15472-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567672 Runtime Siftome inference GEO:sample:GSM3567672:9bb923bc1cbd8c3a4fd56064441d4d2757d01738824c3baaacdf57f710e54311 low confidence skin sample_accession: GSM3567672 sample_title: 15484-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1548... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567673 Runtime Siftome inference GEO:sample:GSM3567673:9a2bbd9aaf60b0fba72f3a0ed43617bb65cf0c11f4f754f6905ad447bef2bb24 low confidence skin sample_accession: GSM3567673 sample_title: 15484-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15484 15484-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567674 Runtime Siftome inference GEO:sample:GSM3567674:d41934d761eeeba297aff1982fa2742f760827d4a498bea1c4550003ceabbd77 low confidence skin sample_accession: GSM3567674 sample_title: 15514-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1551... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567675 Runtime Siftome inference GEO:sample:GSM3567675:dc116b30a7407c2fd9ad3db1846c735163aaef57ed833e7ee11aa83fef3fbda1 low confidence skin sample_accession: GSM3567675 sample_title: 15514-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15514 15514-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567676 Runtime Siftome inference GEO:sample:GSM3567676:21828c71c705744035e01e925c833b828c53984994f51b9deb6ac50ff6fad0ea low confidence skin sample_accession: GSM3567676 sample_title: 15706-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1570... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567677 Runtime Siftome inference GEO:sample:GSM3567677:0cc37df45be9f153d37d72e81669bcf2608b49f95657e1fcf10d48e84227628a low confidence skin sample_accession: GSM3567677 sample_title: 15706-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15706 15706-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567678 Runtime Siftome inference GEO:sample:GSM3567678:34c9d7a31debfc36f71e95f7e5395e975727d5f7bb200b7ad0777aef893cc6bd low confidence skin sample_accession: GSM3567678 sample_title: 15714-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1571... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567679 Runtime Siftome inference GEO:sample:GSM3567679:57f7b9f04e7d22e51add976bae2b16ba8feda2c470cfff1a2947348df28764a7 low confidence skin sample_accession: GSM3567679 sample_title: 15714-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15714 15714-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567680 Runtime Siftome inference GEO:sample:GSM3567680:5b46cb979598c7a9a02f1bdadc65a75c3abb111d843295dc9aacb3a507e59f6a low confidence skin sample_accession: GSM3567680 sample_title: 15715-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1571... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567681 Runtime Siftome inference GEO:sample:GSM3567681:450831df1a990ea80183c1cb94671ccb574c1de5ea13b2f94f231568c0aefb65 low confidence skin sample_accession: GSM3567681 sample_title: 15715-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15715 15715-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567682 Runtime Siftome inference GEO:sample:GSM3567682:89b40acf90384c8d9ddadc56f131db130eb20e7e3141a2e694739418c0691a2e low confidence skin sample_accession: GSM3567682 sample_title: 15797-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1579... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567683 Runtime Siftome inference GEO:sample:GSM3567683:e7d1e085f8f3a9fbaf3ae7bbf0de0f57fca825c3b2f3a3fe2a20720916cff87f low confidence skin sample_accession: GSM3567683 sample_title: 15797-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15797 15797-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567684 Runtime Siftome inference GEO:sample:GSM3567684:4661828ea94409b2e82c2b14776aca80edc054a86db2d654bee868ce293ef1f9 low confidence skin sample_accession: GSM3567684 sample_title: 16037-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1603... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567685 Runtime Siftome inference GEO:sample:GSM3567685:7add43d3a53e8f8b5559879e5563c1b4a61381748fb7322bcce7cd86ab42cf48 low confidence skin sample_accession: GSM3567685 sample_title: 16037-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16037 16037-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567686 Runtime Siftome inference GEO:sample:GSM3567686:7c691ed8dcb56cd7935228443fadd2fce703d4a97cd417d50eb328f9a640ee24 low confidence skin sample_accession: GSM3567686 sample_title: 16072-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1607... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567687 Runtime Siftome inference GEO:sample:GSM3567687:7c602984cea2b8399e41224eb4b742f1deef094ac54135be91c23738162a26d4 low confidence skin sample_accession: GSM3567687 sample_title: 16072-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16072 16072-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567688 Runtime Siftome inference GEO:sample:GSM3567688:64c85517e51f5e87c2d0d1117709bb9492c5db55340f16070c86e76ec6c0eb94 low confidence skin sample_accession: GSM3567688 sample_title: 16111-N source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 1611... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567689 Runtime Siftome inference GEO:sample:GSM3567689:8bc81612e241a0c16940b9a535fdebd8ae4d036f5b8ae6e88ddef2c31150b49f low confidence skin sample_accession: GSM3567689 sample_title: 16111-T source_name: Skin characteristics: disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16111 16111-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567690 Runtime Siftome inference GEO:sample:GSM3567690:4bf37fc6ca1c75b3019f810b314a4b7901fa763ed8ad44e1a7c3c7ab1d1745fe low confidence skin sample_accession: GSM3567690 sample_title: 14478-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567691 Runtime Siftome inference GEO:sample:GSM3567691:ca984a297fd512df3846aade59c63d801515aeeb01d9ed0ce359063d5d87bbf7 low confidence skin sample_accession: GSM3567691 sample_title: 14478-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14478 14478-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567692 Runtime Siftome inference GEO:sample:GSM3567692:178804131fcfcd637bbc2c8d19df4b16f63633e7f23b287c9799194a8c2d13fd low confidence skin sample_accession: GSM3567692 sample_title: 14672-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567693 Runtime Siftome inference GEO:sample:GSM3567693:a01d59b25e0d36d6a6b0567b9d62950961bb441990fc8490ba471fbff38938c5 low confidence skin sample_accession: GSM3567693 sample_title: 14672-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14672 14672-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567694 Runtime Siftome inference GEO:sample:GSM3567694:79d459af2c2bb7389e34b8f12a00faf7e86c3734170affdce1b785fe2dd24cc6 low confidence skin sample_accession: GSM3567694 sample_title: 15179-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567695 Runtime Siftome inference GEO:sample:GSM3567695:d342471276a6192f86fc83099e7b8aa4a2f201584f5678a007af480503c13ea7 low confidence skin sample_accession: GSM3567695 sample_title: 15179-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15179 15179-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567696 Runtime Siftome inference GEO:sample:GSM3567696:32261b03ce231af6e26e5bad28800f526bd6317898264b14508640ef2fbbf762 low confidence skin sample_accession: GSM3567696 sample_title: 15336-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567697 Runtime Siftome inference GEO:sample:GSM3567697:ac126c47a67cbe402816721a3c52707d5cf4201f3f3f90335530dffc3d3577e2 low confidence skin sample_accession: GSM3567697 sample_title: 15336-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15336 15336-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567698 Runtime Siftome inference GEO:sample:GSM3567698:83f75b80270b8a14edc43ca70eab712fd8e563c1c0a6aa80f170acedc7e921c9 low confidence skin sample_accession: GSM3567698 sample_title: 15551-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567699 Runtime Siftome inference GEO:sample:GSM3567699:2761c9b63ff7b6416bbb5f3c21e322a43318f0f7581165e1d737e7dc1e751fad low confidence skin sample_accession: GSM3567699 sample_title: 15551-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15551 15551-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567700 Runtime Siftome inference GEO:sample:GSM3567700:f2db4e6a6f3fb12f786a6f46aece264074eab6db1f630f22dce3a960e603d9ab low confidence skin sample_accession: GSM3567700 sample_title: 15554-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567701 Runtime Siftome inference GEO:sample:GSM3567701:adc153f2a9c67bd59de0e9032aafb2f9e9f3530ce4325cf3610980e349fd11cc low confidence skin sample_accession: GSM3567701 sample_title: 15554-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15554 15554-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567702 Runtime Siftome inference GEO:sample:GSM3567702:2fd93c291a64cf6c9fcb21f5cd33f0dba60ee6474235fcd4a8965b02234f5616 low confidence skin sample_accession: GSM3567702 sample_title: 15678-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567703 Runtime Siftome inference GEO:sample:GSM3567703:25a1532b056e1c357b0ac9f5de768b3a9b57fc8eba6f0cc1e60de9436b58a36c low confidence skin sample_accession: GSM3567703 sample_title: 15678-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15678 15678-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567704 Runtime Siftome inference GEO:sample:GSM3567704:5404e7ab10a9db69fc5b2f9f7444a5dab40aa429dd8082f8decc22b705241aa6 low confidence skin sample_accession: GSM3567704 sample_title: 15685-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567705 Runtime Siftome inference GEO:sample:GSM3567705:d1cc330c2f68ef146fdef317a392de2edc7918466cea5e65d936a547ba3da8ed low confidence skin sample_accession: GSM3567705 sample_title: 15685-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15685 15685-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567706 Runtime Siftome inference GEO:sample:GSM3567706:72aad1c1e26bf465af3564fe60a2c5df5f8191dc68e0ca7effbb86290ff33fdc low confidence skin sample_accession: GSM3567706 sample_title: 15724-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567707 Runtime Siftome inference GEO:sample:GSM3567707:4ab370881da84a29048cdd670ad314d3673a7845b48048ef1408616a5f9749b9 low confidence skin sample_accession: GSM3567707 sample_title: 15724-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15724 15724-T controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567708 Runtime Siftome inference GEO:sample:GSM3567708:9f9932ee0f8657a116580a2287811077a014741530657fc536fcfdfe1e1740ca low confidence skin sample_accession: GSM3567708 sample_title: 16059-N source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 1... controlled vocabulary controlled vocabulary tissue match: skin

tissue skin sample GSM3567709 Runtime Siftome inference GEO:sample:GSM3567709:ac27fa854f9d80dea51f5cf1d506db41d24fa598d480affd16524f74f8d2b660 low confidence skin sample_accession: GSM3567709 sample_title: 16059-T source_name: Skin characteristics: disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 16059 16059-T controlled vocabulary controlled vocabulary tissue match: skin

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

35

GSM3567641 14473-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473
GSM3567643 14476-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476
GSM3567645 14487-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14487
GSM3567647 14522-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14522
GSM3567649 14630-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14630
GSM3567651 14644-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14644
GSM3567653 14666-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14666
GSM3567655 14688-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14688
GSM3567657 15047-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15047
GSM3567659 15318-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15318
GSM3567661 15360-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15360
GSM3567663 15372-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15372
GSM3567665 15392-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15392
GSM3567667 15409-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15409
GSM3567669 15416-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15416
GSM3567671 15472-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15472
GSM3567673 15484-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15484
GSM3567675 15514-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15514
GSM3567677 15706-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15706
GSM3567679 15714-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15714
GSM3567681 15715-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15715
GSM3567683 15797-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15797
GSM3567685 16037-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16037
GSM3567687 16072-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16072
GSM3567689 16111-T tumor sample Case marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16111
GSM3567691 14478-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14478
GSM3567693 14672-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14672
GSM3567695 15179-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15179
GSM3567697 15336-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15336
GSM3567699 15551-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15551
GSM3567701 15554-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15554
GSM3567703 15678-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15678
GSM3567705 15685-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15685
GSM3567707 15724-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15724
GSM3567709 16059-T tumor sample Case marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 16059

Possible control samples

Samples currently treated as controls or baseline.

35

GSM3567640 14473-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473
GSM3567642 14476-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476
GSM3567644 14487-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487
GSM3567646 14522-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14522
GSM3567648 14630-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14630
GSM3567650 14644-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14644
GSM3567652 14666-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14666
GSM3567654 14688-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14688
GSM3567656 15047-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15047
GSM3567658 15318-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15318
GSM3567660 15360-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15360
GSM3567662 15372-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15372
GSM3567664 15392-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15392
GSM3567666 15409-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15409
GSM3567668 15416-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15416
GSM3567670 15472-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15472
GSM3567672 15484-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15484
GSM3567674 15514-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15514
GSM3567676 15706-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15706
GSM3567678 15714-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15714
GSM3567680 15715-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15715
GSM3567682 15797-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15797
GSM3567684 16037-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16037
GSM3567686 16072-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16072
GSM3567688 16111-N normal tissue Control marker detected. Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16111
GSM3567690 14478-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 14478
GSM3567692 14672-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 14672
GSM3567694 15179-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15179
GSM3567696 15336-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15336
GSM3567698 15551-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15551
GSM3567700 15554-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15554
GSM3567702 15678-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15678
GSM3567704 15685-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15685
GSM3567706 15724-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15724
GSM3567708 16059-N normal tissue Control marker detected. Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 16059

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

85 pts

Clarity: 85%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

normal tissue

35 samples

GSM3567640 14473-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14473
GSM3567642 14476-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14476
GSM3567644 14487-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14487
GSM3567646 14522-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14522
GSM3567648 14630-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14630
GSM3567650 14644-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14644
GSM3567652 14666-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14666
GSM3567654 14688-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 14688
GSM3567656 15047-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15047
GSM3567658 15318-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15318
GSM3567660 15360-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15360
GSM3567662 15372-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15372
GSM3567664 15392-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15392
GSM3567666 15409-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15409
GSM3567668 15416-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15416
GSM3567670 15472-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15472
GSM3567672 15484-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15484
GSM3567674 15514-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15514
GSM3567676 15706-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15706
GSM3567678 15714-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15714
GSM3567680 15715-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15715
GSM3567682 15797-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 15797
GSM3567684 16037-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16037
GSM3567686 16072-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16072
GSM3567688 16111-N Skin disease state: Basal cell carcinoma (BCC); tissue: Normal adjacent tissue; patient id: 16111
GSM3567690 14478-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 14478
GSM3567692 14672-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 14672
GSM3567694 15179-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15179
GSM3567696 15336-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15336
GSM3567698 15551-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15551
GSM3567700 15554-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15554
GSM3567702 15678-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15678
GSM3567704 15685-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15685
GSM3567706 15724-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 15724
GSM3567708 16059-N Skin disease state: Squamous cell carcinoma (SCC); tissue: Normal adjacent tissue; patient id: 16059

tumor sample

35 samples

GSM3567641 14473-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14473
GSM3567643 14476-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14476
GSM3567645 14487-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14487
GSM3567647 14522-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14522
GSM3567649 14630-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14630
GSM3567651 14644-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14644
GSM3567653 14666-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14666
GSM3567655 14688-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 14688
GSM3567657 15047-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15047
GSM3567659 15318-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15318
GSM3567661 15360-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15360
GSM3567663 15372-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15372
GSM3567665 15392-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15392
GSM3567667 15409-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15409
GSM3567669 15416-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15416
GSM3567671 15472-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15472
GSM3567673 15484-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15484
GSM3567675 15514-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15514
GSM3567677 15706-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15706
GSM3567679 15714-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15714
GSM3567681 15715-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15715
GSM3567683 15797-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 15797
GSM3567685 16037-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16037
GSM3567687 16072-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16072
GSM3567689 16111-T Skin disease state: Basal cell carcinoma (BCC); tissue: Tumor; patient id: 16111
GSM3567691 14478-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14478
GSM3567693 14672-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 14672
GSM3567695 15179-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15179
GSM3567697 15336-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15336
GSM3567699 15551-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15551
GSM3567701 15554-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15554
GSM3567703 15678-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15678
GSM3567705 15685-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15685
GSM3567707 15724-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 15724
GSM3567709 16059-T Skin disease state: Squamous cell carcinoma (SCC); tissue: Tumor; patient id: 16059

Score Breakdown

60%

relevance

Organism normalized.
Assay type normalized.
Tissue metadata normalized.

0%

comparison suitability

Tumor and normal sample groups detected.
No excluded sample type flags detected.
Matched tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
Patient tissue or biopsy specimens boosted for tissue comparison triage.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.

85%

metadata quality

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
Group clarity: Rule-based grouping found both case and control samples.
Disease clarity: Disease or condition metadata was not normalized.
Tissue clarity: Tissue metadata normalized.
Treatment clarity: No unclear treatment split detected in the sample metadata.
Replicate clarity: No pooled sample or technical replicate flags detected.
Data availability clarity: Dataset-level processed or raw data availability is explicit.

100%

data availability

Processed data available.
Raw data available.

34%

overall

Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Sample Links

70 samples

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.