Siftome Phase 3L

GSE135298

Breast Cancer - immune clusters - RNA-seq

Not suitable Dataset does not meet the current suitability threshold.
Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset
Source
GEO
Search intent
Patient tissue tumor-vs-normal
Intent behavior
search-intent-behavior-v1
Submission date
2019-08-02
Last update
2019-12-10
Organization
Oslo University Hospital Radiumhospitalet
Department
Cancer Genetics
Public date
2019-12-10
Experiment types
Expression profiling by high throughput sequencing
Platforms
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Series type
Series
SubSeries
Not available
BioProject
PRJNA558331
Supplementary files
TXT: GSE135298_OSLO2_EMIT0_RNA-seq.txt.gz
Organism
Homo sapiens
Assay
bulk RNA-seq
Samples
93
Study design
Tumor vs unmatched normal
Specimen/source
Tissue
Scoring version
intent-aware-scoring-v15
Ranking batch
b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created
2026-06-05T20:20:27.088676Z
Warning version
intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism
Homo sapiens
Assay
bulk RNA-seq
Specimen/source
patient tissue or biopsy
Controls
matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters
Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules
missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps
non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts
microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs unmatched normal Tissue

Analysis Readiness

Ready after review
100% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

10/10 pts

No dataset warnings are present.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

  • Review the sample grouping CSV and contrast CSV before running differential expression.
  • Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

No expert-review triggers were detected by Siftome.

Why This Is Ranked Here

Patient tissue tumor-vs-normal
Not suitable Dataset does not meet the current suitability threshold.

Score Components

  • relevance 100% Disease or condition metadata normalized. Organism normalized. Assay type normalized. Tissue metadata normalized.
  • comparison suitability 0% Tumor and normal sample groups detected. No excluded sample type flags detected. Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
  • metadata quality 100% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
  • data availability 100% Processed data available. Raw data available.
  • overall 34% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Derived Classifications

  • Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
  • Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
  • Study design Tumor vs unmatched normal Study design remains rule-derived: Tumor vs unmatched normal.
  • Specimen/source Tissue Specimen/source remains rule-derived: Tissue.
  • Likely case group tumor sample 82 samples
  • Likely control group normal tissue 11 samples

Warnings

No ranking warnings are active.

Intent Interpretation

  • Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
  • Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
  • Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
  • Specimen assumption patient tissue or biopsy Derived specimen/source is Tissue.
  • Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs unmatched normal; likely groups are tumor sample vs normal tissue.
  • Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
  • Warning rules 0 active warnings missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
  • Downgrade or exclusion reason Downgraded disease context: not a colorectal/GI cancer cohort. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

  • Recommendation Not suitable Dataset does not meet the current suitability threshold.
  • Supporting fact Tumor vs unmatched normal · Tissue · suitability 0%. Contributed to match or upgrade evidence.
  • Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
  • Supporting fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to match or upgrade evidence.
  • Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
  • Caution fact Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
  • Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
  • Caution fact Overall score capped because tumor/normal grouping is from a non-colorectal cancer context. Contributed to downgrade or manual-review evidence.
  • Caution fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to downgrade or manual-review evidence.
  • Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession
GSE135298
Sample records
93 GSM samples
  • GEO has priority for original metadata under the Phase 3J source rules.
  • Processed data: available.
  • Raw data: available.
  • No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession
GSE135298
  • No recount3 project identifier has been imported for this dataset.
  • Once imported, recount3 has priority for processed count availability.
  • The recount3 source filter excludes this dataset until that linkage exists.
No recount3 sync data available.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession
GSE135298
  • No Expression Atlas experiment identifier has been imported for this dataset.
  • Once imported, Expression Atlas has priority for curated expression experiment links.
  • The Expression Atlas source filter excludes this dataset until that linkage exists.
No Expression Atlas sync data available.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession
GSE135298
  • No PubMed identifier is present in the current runtime metadata.
  • No live PubMed search is performed from the dataset detail page.
No publication identifier imported.

Dataset Feedback

0 stored

Original GEO Metadata

dataset_accession: GSE135298
dataset_title: Breast Cancer - immune clusters - RNA-seq
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2019-08-02
last_update_date: 2019-12-10
organization_name: Oslo University Hospital Radiumhospitalet
department: Cancer Genetics
public_date: 2019-12-10
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL11154 Illumina HiSeq 2000 (Homo sapiens)
sub_series: Not available
bioproject: PRJNA558331
supplementary_files: TXT: GSE135298_OSLO2_EMIT0_RNA-seq.txt.gz
series_type: Series

Why It Matched

  • Tumor vs unmatched normal · Tissue · suitability 0%.
  • Prioritized assay: bulk RNA-seq is the active assay expectation.
  • Downgraded disease context: not a colorectal/GI cancer cohort.
  • Processed data is available for downstream review.

Why It May Not Be Suitable

  • Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
  • Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.
  • Downgraded disease context: not a colorectal/GI cancer cohort.
  • Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

No warnings

Normalized Fields

201 fields
Field Value Source Origin Confidence Evidence Reason
assay_type bulk RNA-seq dataset GSE135298 Runtime Siftome inference GEO:dataset:GSE135298:bc85d1d32ace1ed6aab70bfe954a21da6913a2b344efdeeb0bec9c56e6a9a193 high confidence bulk rna-seq dataset_accession: GSE135298 dataset_title: Breast Cancer - immune clusters - RNA-seq organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available: true raw_data_ava... keyword match keyword match: bulk rna-seq
disease breast cancer dataset GSE135298 Runtime Siftome inference GEO:dataset:GSE135298:bc85d1d32ace1ed6aab70bfe954a21da6913a2b344efdeeb0bec9c56e6a9a193 high confidence breast cancer dataset_accession: GSE135298 dataset_title: Breast Cancer - immune clusters - RNA-seq organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available: true raw_data_ava... controlled vocabulary controlled vocabulary disease match: breast cancer
organism Homo sapiens dataset GSE135298 Runtime Siftome inference GEO:dataset:GSE135298:bc85d1d32ace1ed6aab70bfe954a21da6913a2b344efdeeb0bec9c56e6a9a193 high confidence homo sapiens dataset_accession: GSE135298 dataset_title: Breast Cancer - immune clusters - RNA-seq organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available: true raw_data_ava... keyword match keyword match: homo sapiens
sample_type normal tissue sample GSM4002983 Runtime Siftome inference GEO:sample:GSM4002983:e449b6e8b8ac87e0b8f108b79785f9a9312da8aa2f6dc76cea0e616985a40ebf low confidence normal sample_accession: GSM4002983 sample_title: GE0081584 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 10; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4002983 Runtime Siftome inference GEO:sample:GSM4002983:e449b6e8b8ac87e0b8f108b79785f9a9312da8aa2f6dc76cea0e616985a40ebf low confidence tumor sample_accession: GSM4002983 sample_title: GE0081584 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 10; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002984 Runtime Siftome inference GEO:sample:GSM4002984:03f5d7be63013acfedabf0724404112d922c51959a574daf7f3ef4e9d299f421 low confidence tumor sample_accession: GSM4002984 sample_title: GE0081585 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 75; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002985 Runtime Siftome inference GEO:sample:GSM4002985:6ee01f57248a230176fa2228a099244f4ea2a9181b8eaf306ecb1a37922fadf2 low confidence tumor sample_accession: GSM4002985 sample_title: GE0081586 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 38; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002986 Runtime Siftome inference GEO:sample:GSM4002986:3a8cbb9e03ffa98455feff3a92de02b55719af4dcea7f82f6cd6670f7ec84edb low confidence tumor sample_accession: GSM4002986 sample_title: GE0081587 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 43; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002987 Runtime Siftome inference GEO:sample:GSM4002987:c0ed9d50f8247fdf3938580f79d2c9ed7c3c7378978452b4e9fbda486f2593df low confidence tumor sample_accession: GSM4002987 sample_title: GE0081588 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 92; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002988 Runtime Siftome inference GEO:sample:GSM4002988:6344b6dd2af2fc4a48defef6465516c2a477c6d24518c3517381a57ffc156f22 low confidence tumor sample_accession: GSM4002988 sample_title: GE0081589 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 60; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4002989 Runtime Siftome inference GEO:sample:GSM4002989:4e2317af3965664c0008dd8098760799151ce128bcd8c8968956839a6b0283f8 low confidence normal sample_accession: GSM4002989 sample_title: GE0082902 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4002989 Runtime Siftome inference GEO:sample:GSM4002989:4e2317af3965664c0008dd8098760799151ce128bcd8c8968956839a6b0283f8 low confidence tumor sample_accession: GSM4002989 sample_title: GE0082902 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002990 Runtime Siftome inference GEO:sample:GSM4002990:fe2111499965f5ba1cdde6f82f8651b74394c765854b1f709e9946505ae42ccb low confidence tumor sample_accession: GSM4002990 sample_title: GE0082910 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 83; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002991 Runtime Siftome inference GEO:sample:GSM4002991:e44835914276249baadfc381c219caad0247fb93119c007dfa0ff43959a3850d low confidence tumor sample_accession: GSM4002991 sample_title: GE0082918 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002992 Runtime Siftome inference GEO:sample:GSM4002992:c81886aa03b0f3e00b8991e3b453d88ff90c2d0ef2f4de5066f5d60614f50569 low confidence tumor sample_accession: GSM4002992 sample_title: GE0082926 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 20; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002993 Runtime Siftome inference GEO:sample:GSM4002993:c7cbf4bb908831c6f9ca70445af9a9300fabe8a33802a7e7e34e1c95394f0fff low confidence tumor sample_accession: GSM4002993 sample_title: GE0082934 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 62; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002994 Runtime Siftome inference GEO:sample:GSM4002994:3c7ec5b937a57230073cc4a56fc72ce399398884dd44a7c8e5f64495eb65e1b7 low confidence tumor sample_accession: GSM4002994 sample_title: GE0082942 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 39; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002995 Runtime Siftome inference GEO:sample:GSM4002995:e16ea3c2978fe648ecd8eb720a8d4db537623f287f2c07bdf4412f610f3c6173 low confidence tumor sample_accession: GSM4002995 sample_title: GE0082950 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 22; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002996 Runtime Siftome inference GEO:sample:GSM4002996:edbaec641c6d3dab6107279d3221d2e4438406e45038275b9a69741eefa97963 low confidence tumor sample_accession: GSM4002996 sample_title: GE0082958 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 31; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002997 Runtime Siftome inference GEO:sample:GSM4002997:bba9f9926feace3195b1e468e31a3d16bef50e5d201575a46996eb851e21d4df low confidence tumor sample_accession: GSM4002997 sample_title: GE0082966 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 45; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002998 Runtime Siftome inference GEO:sample:GSM4002998:1944b8a747dfd472fcedb53014b3a9a235a855fb34cb9d7407a6e373bbf00edc low confidence tumor sample_accession: GSM4002998 sample_title: GE0082974 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 66; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4002999 Runtime Siftome inference GEO:sample:GSM4002999:af3e91095b10ee08318412e871234df56d6e998f80aeccc1c76df6d33ee53c16 low confidence tumor sample_accession: GSM4002999 sample_title: GE0082982 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 69; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003000 Runtime Siftome inference GEO:sample:GSM4003000:08ecbc61fe553235d0a1283c03ff45c9d439e0cd1c3f232b58dcf5afb8611be5 low confidence tumor sample_accession: GSM4003000 sample_title: GE0082990 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003001 Runtime Siftome inference GEO:sample:GSM4003001:4e4757c397321b760f89f00966261f344d12befcb29bf214b98096f27d1ccafa low confidence tumor sample_accession: GSM4003001 sample_title: GE0083925 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 27; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003002 Runtime Siftome inference GEO:sample:GSM4003002:0290befdd3ed682058b75211b5e11f46835dd326acf1a9b9b8b2e0e0a697d625 low confidence tumor sample_accession: GSM4003002 sample_title: GE0083926 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 61; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003003 Runtime Siftome inference GEO:sample:GSM4003003:87ce96d4e2cae038c698638fe40ca2aafe0e71b80583d00dcf06c7f6fcd22187 low confidence tumor sample_accession: GSM4003003 sample_title: GE0084007 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 72; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003004 Runtime Siftome inference GEO:sample:GSM4003004:d2f93ea066be0b09822a5c7c08b1e46407aa458dc1562dbec1cdbe5a82496032 low confidence tumor sample_accession: GSM4003004 sample_title: GE0084008 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 19; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003005 Runtime Siftome inference GEO:sample:GSM4003005:154982f48dd4bd8d473d45a359f87202471928a1fbd2dfe87328ab1d78eebaf0 low confidence tumor sample_accession: GSM4003005 sample_title: GE0084009 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 32; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003006 Runtime Siftome inference GEO:sample:GSM4003006:d95c33da8e61ff87871d033608fde7189b999fa33c25ad890af55000d2983bfc low confidence tumor sample_accession: GSM4003006 sample_title: GE0084010 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 23; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003007 Runtime Siftome inference GEO:sample:GSM4003007:7b8d0e9cca0a8b0b7b9d0b91ffc2f7f0d0387f8845255381a0e6f917cb0c761e low confidence tumor sample_accession: GSM4003007 sample_title: GE0084013 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 53; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003008 Runtime Siftome inference GEO:sample:GSM4003008:3d9abe0ff8ad33bb8eadd0eeab1e0dd6e9bd5b7ea40c4b67ceaec200582611f9 low confidence tumor sample_accession: GSM4003008 sample_title: GE0084014 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 73; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003009 Runtime Siftome inference GEO:sample:GSM4003009:12f3a083511705374550243e5dc943135bf45ae47da5812cb3d7fceea73082c3 low confidence tumor sample_accession: GSM4003009 sample_title: GE0084015 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 39; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003010 Runtime Siftome inference GEO:sample:GSM4003010:d228173668bf62d6603a0d3736f052f3524402e267c52b9818cdf798ef640ec6 low confidence tumor sample_accession: GSM4003010 sample_title: GE0084016 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 57; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003011 Runtime Siftome inference GEO:sample:GSM4003011:543a0dbbad332e3bdd5fd0355cbc034ad04ddc199481cdb3e1a81f98a580b42f low confidence tumor sample_accession: GSM4003011 sample_title: GE0081422 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Her2; ror score: 57; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003012 Runtime Siftome inference GEO:sample:GSM4003012:f13b431e21a73fb739ba94c843200c872752d70d83946f4d66e3d50b41c4c04f low confidence tumor sample_accession: GSM4003012 sample_title: GE0081423 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 8; immune... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003013 Runtime Siftome inference GEO:sample:GSM4003013:bc5965ccccacef95f1841f9a20138a1982ca04ad3005d55a31e7c66ee2cfc754 low confidence normal sample_accession: GSM4003013 sample_title: GE0081424 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 55; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003013 Runtime Siftome inference GEO:sample:GSM4003013:bc5965ccccacef95f1841f9a20138a1982ca04ad3005d55a31e7c66ee2cfc754 low confidence tumor sample_accession: GSM4003013 sample_title: GE0081424 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 55; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003014 Runtime Siftome inference GEO:sample:GSM4003014:5e17fe3d73e030abdd0c34c2977040cc9442cb70a4fa4ea0ef0834a7b65d3b6e low confidence tumor sample_accession: GSM4003014 sample_title: GE0081426 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 87; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003015 Runtime Siftome inference GEO:sample:GSM4003015:5068ee3a34cab8cccd5dae642fc92324493d1814cd397681aa51829525954179 low confidence tumor sample_accession: GSM4003015 sample_title: GE0081427 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003016 Runtime Siftome inference GEO:sample:GSM4003016:d63e6386a4c3c22757237f47abf48859f3ce5cf11ff215de3f791ef05c55fac5 low confidence tumor sample_accession: GSM4003016 sample_title: GE0081429 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 65; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003017 Runtime Siftome inference GEO:sample:GSM4003017:e0cf0acdbfdf192a8185c6929433724aa834c61943ba56f457b02ab427ff1264 low confidence normal sample_accession: GSM4003017 sample_title: GE0081430 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 38; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003017 Runtime Siftome inference GEO:sample:GSM4003017:e0cf0acdbfdf192a8185c6929433724aa834c61943ba56f457b02ab427ff1264 low confidence tumor sample_accession: GSM4003017 sample_title: GE0081430 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 38; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003018 Runtime Siftome inference GEO:sample:GSM4003018:030d2853ba8151e41f3631f7a298d24c978f7af82c6582f7b5fec154a4f51d1b low confidence tumor sample_accession: GSM4003018 sample_title: GE0081431 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 32; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003019 Runtime Siftome inference GEO:sample:GSM4003019:1e580151198e0c51c9baea9c6d91e63cbca50b7bb5e1a500df542bd8022874d9 low confidence tumor sample_accession: GSM4003019 sample_title: GE0081432 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 26; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003020 Runtime Siftome inference GEO:sample:GSM4003020:2081505cf5b89f81faa379085c87f2a4431edda8da0eadca6bd4dfa5d5acdc11 low confidence tumor sample_accession: GSM4003020 sample_title: GE0081433 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 39; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003021 Runtime Siftome inference GEO:sample:GSM4003021:db84dbb53806964da3c8ba672ed734fdd2e7be899bd50d3d9ffa551402ddbd7e low confidence tumor sample_accession: GSM4003021 sample_title: GE0081434 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003022 Runtime Siftome inference GEO:sample:GSM4003022:5b9a91e69eb79ece79538920aa464815d19c4b35fc9a202f5753ecbea4f7ac74 low confidence tumor sample_accession: GSM4003022 sample_title: GE0081435 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 60; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003023 Runtime Siftome inference GEO:sample:GSM4003023:5b8d828ae4cf08d4f716f72dace89b4236fd29f3273e39ca4f48c1e39668eb27 low confidence tumor sample_accession: GSM4003023 sample_title: GE0081436 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 55; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003024 Runtime Siftome inference GEO:sample:GSM4003024:48a1110f8b9454245bbb84170ca925c930ffce53d31d923663ff9503a9658b32 low confidence tumor sample_accession: GSM4003024 sample_title: GE0081438 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 15; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003025 Runtime Siftome inference GEO:sample:GSM4003025:355d3dcdb89b791b1f1ba30c35364435fb5e330a8170f3a77ef7d54af62779c3 low confidence tumor sample_accession: GSM4003025 sample_title: GE0081439 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 21; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003026 Runtime Siftome inference GEO:sample:GSM4003026:3a11abffce59f7d6691b16825fff8558872561eb79a1505730dd21c27503da37 low confidence normal sample_accession: GSM4003026 sample_title: GE0081440 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 40; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003026 Runtime Siftome inference GEO:sample:GSM4003026:3a11abffce59f7d6691b16825fff8558872561eb79a1505730dd21c27503da37 low confidence tumor sample_accession: GSM4003026 sample_title: GE0081440 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 40; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003027 Runtime Siftome inference GEO:sample:GSM4003027:a8d8af63753b51b127dbc86e3508da7a4e495a383d360836af79b7f219c48916 low confidence normal sample_accession: GSM4003027 sample_title: GE0081441 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003027 Runtime Siftome inference GEO:sample:GSM4003027:a8d8af63753b51b127dbc86e3508da7a4e495a383d360836af79b7f219c48916 low confidence tumor sample_accession: GSM4003027 sample_title: GE0081441 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003028 Runtime Siftome inference GEO:sample:GSM4003028:ea681cefd85f41e4a0575f0ae113404b94eb673c462148721784cad756878a6b low confidence tumor sample_accession: GSM4003028 sample_title: GE0081444 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 76; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003029 Runtime Siftome inference GEO:sample:GSM4003029:132ed2eda4e224afdfc71b784361ef2bb18cdd2686bb1ce4b784306081dd68c3 low confidence normal sample_accession: GSM4003029 sample_title: GE0081445 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 14; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003029 Runtime Siftome inference GEO:sample:GSM4003029:132ed2eda4e224afdfc71b784361ef2bb18cdd2686bb1ce4b784306081dd68c3 low confidence tumor sample_accession: GSM4003029 sample_title: GE0081445 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 14; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003030 Runtime Siftome inference GEO:sample:GSM4003030:a00eb2b3a1caea91d0dce812ea1fd7ca83b240579f4028caacd22e13981aed7f low confidence tumor sample_accession: GSM4003030 sample_title: GE0083368 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003031 Runtime Siftome inference GEO:sample:GSM4003031:6874a477934ed15e5aa56e8fb230f7333ff388c2b72a42fc1214547e791f299c low confidence tumor sample_accession: GSM4003031 sample_title: GE0083384 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 80; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003032 Runtime Siftome inference GEO:sample:GSM4003032:2a917329e5db5d9fe746e45ca238070a2a2b373913b6b85613b7812c7e3e21bd low confidence tumor sample_accession: GSM4003032 sample_title: GE0083392 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 46; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003033 Runtime Siftome inference GEO:sample:GSM4003033:57cd21e996576bc344f5554dc80c95f80db14c1daddfe23512cf8a9bf6c7bdbf low confidence tumor sample_accession: GSM4003033 sample_title: GE0083400 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Basal; ror score: 46; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003034 Runtime Siftome inference GEO:sample:GSM4003034:4a8b498ecb00410f8db628cb9870c41a7d889870cf4d3395a835bea881604e6d low confidence tumor sample_accession: GSM4003034 sample_title: GE0083408 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 48; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003035 Runtime Siftome inference GEO:sample:GSM4003035:7fbb786cac897b31ba74661fa802a9c5c684a0b60ee605a53af49e6fb5d7d540 low confidence tumor sample_accession: GSM4003035 sample_title: GE0083416 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 11; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003036 Runtime Siftome inference GEO:sample:GSM4003036:9ac90658f84861a42e9451f06fd818755bee97b9d8758aeb30ba642fc6d02dd5 low confidence tumor sample_accession: GSM4003036 sample_title: GE0083424 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 68; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003037 Runtime Siftome inference GEO:sample:GSM4003037:b360a923723333a98df7ea42efd8d6d1bf1503a8bd75124186aed7e08705411a low confidence tumor sample_accession: GSM4003037 sample_title: GE0083448 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 69; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003038 Runtime Siftome inference GEO:sample:GSM4003038:73daf296f11307e57829a2b03667151109c815df6cf7793ead371fffda586019 low confidence normal sample_accession: GSM4003038 sample_title: GE0083464 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 42; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003038 Runtime Siftome inference GEO:sample:GSM4003038:73daf296f11307e57829a2b03667151109c815df6cf7793ead371fffda586019 low confidence tumor sample_accession: GSM4003038 sample_title: GE0083464 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 42; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003039 Runtime Siftome inference GEO:sample:GSM4003039:ddcbd12f7d8cc72a417269c5fa430d5ad3887543b9d322b6cea5b27fea1b6928 low confidence tumor sample_accession: GSM4003039 sample_title: GE0083512 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 28; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003040 Runtime Siftome inference GEO:sample:GSM4003040:61b0daf7fc71a537e79a49adfb7ad9fb3e3ba3b4a9b1f439c968a62a6e54d2c3 low confidence tumor sample_accession: GSM4003040 sample_title: GE0083544 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 62; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003041 Runtime Siftome inference GEO:sample:GSM4003041:d115c5ecf803833adf7bbad25119d99b3e56c54bc46c71aa5948f63c26f659f7 low confidence tumor sample_accession: GSM4003041 sample_title: GE0083552 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 24; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003042 Runtime Siftome inference GEO:sample:GSM4003042:dc58468b08b44b8e506a4e51a351a956548ca14b12710d3fb23444117bafa641 low confidence tumor sample_accession: GSM4003042 sample_title: GE0083568 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 60; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003043 Runtime Siftome inference GEO:sample:GSM4003043:d415def9cd6e39be617b665f510b36119dd2ea5793575072270a9d7c7ed57edb low confidence tumor sample_accession: GSM4003043 sample_title: GE0083576 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 62; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003044 Runtime Siftome inference GEO:sample:GSM4003044:0cd2e41960d18e65f102b98fc7b44fa7cca30d314a601ad190c5d3e4f4de40ae low confidence tumor sample_accession: GSM4003044 sample_title: GE0083600 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 49; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003045 Runtime Siftome inference GEO:sample:GSM4003045:dffae852cf5c11d75684d0cd77eb74737110bef0e557d87eb0586e532ef96c52 low confidence normal sample_accession: GSM4003045 sample_title: GE0083608 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 64; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003045 Runtime Siftome inference GEO:sample:GSM4003045:dffae852cf5c11d75684d0cd77eb74737110bef0e557d87eb0586e532ef96c52 low confidence tumor sample_accession: GSM4003045 sample_title: GE0083608 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 64; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003046 Runtime Siftome inference GEO:sample:GSM4003046:aab2f5f0e1d007b35d002af3bf5cf0668302a09c7c345bbc6b8e193cefe65e47 low confidence tumor sample_accession: GSM4003046 sample_title: GE0083632 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 69; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003047 Runtime Siftome inference GEO:sample:GSM4003047:3acf21dc2befcb13a726475a5a0f90fb6399680d91de79f6435fa04fcc3f642c low confidence normal sample_accession: GSM4003047 sample_title: GE0083640 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 76; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003047 Runtime Siftome inference GEO:sample:GSM4003047:3acf21dc2befcb13a726475a5a0f90fb6399680d91de79f6435fa04fcc3f642c low confidence tumor sample_accession: GSM4003047 sample_title: GE0083640 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 76; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003048 Runtime Siftome inference GEO:sample:GSM4003048:9276263097f1103082f05c5f300086e5d6ca3c3dc6d9231a316029e76a08fecf low confidence tumor sample_accession: GSM4003048 sample_title: GE0083664 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 41; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003049 Runtime Siftome inference GEO:sample:GSM4003049:a801e1735cdf0168392d7843d1ead978b16b1bfd5f04bd90649b80d337215aa4 low confidence tumor sample_accession: GSM4003049 sample_title: GE0083672 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 56; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003050 Runtime Siftome inference GEO:sample:GSM4003050:1d82ab7c2ffa447241aa069aed504bdd2e6cc01f9fb083ae0afe2d55568b77d2 low confidence tumor sample_accession: GSM4003050 sample_title: GE0083680 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 62; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003051 Runtime Siftome inference GEO:sample:GSM4003051:388b2af5178ac44a57cc83f84469c4415aba12d3eb613bab8a27c43fa0b62f9c low confidence tumor sample_accession: GSM4003051 sample_title: GE0083696 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 83; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003052 Runtime Siftome inference GEO:sample:GSM4003052:e9a3ad475eb98a443bee02e5ea0a2e3a7d6cb23144a31ef32dce2f1c1b57425f low confidence tumor sample_accession: GSM4003052 sample_title: GE0083704 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 45; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003053 Runtime Siftome inference GEO:sample:GSM4003053:78efeb0c1eaf98c5999996e9d6e4fcdde60e8721909cc0543f39b475e9a79908 low confidence tumor sample_accession: GSM4003053 sample_title: GE0083720 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 20; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003054 Runtime Siftome inference GEO:sample:GSM4003054:0a5752362fb9eb635df84b3e5a8ae64d56bced183099b5d931b07b2c70462548 low confidence tumor sample_accession: GSM4003054 sample_title: GE0083728 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 67; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003055 Runtime Siftome inference GEO:sample:GSM4003055:d46e11ff32aeaa6c02fdf0f69f1c042a4cfd409e3328104776eec3680f548a65 low confidence tumor sample_accession: GSM4003055 sample_title: GE0083768 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 51; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003056 Runtime Siftome inference GEO:sample:GSM4003056:ec64bbe53a334004318287005a3908a0a513c660961be0a3a44690eec394fcad low confidence tumor sample_accession: GSM4003056 sample_title: GE0089175 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 50; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003057 Runtime Siftome inference GEO:sample:GSM4003057:7d0c5dd17fbf3d99305476cad3cd2ee2e1870a8466887acdbf7bc886ac9dc3b2 low confidence tumor sample_accession: GSM4003057 sample_title: GE0089177 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 26; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003058 Runtime Siftome inference GEO:sample:GSM4003058:af21e5cf250e8d35539d4f8340e8c950f260608ee84d7e6f58eec2edd5ae2b61 low confidence tumor sample_accession: GSM4003058 sample_title: GE0089178 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 63; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003059 Runtime Siftome inference GEO:sample:GSM4003059:b9d38d4bc8ee762ba7f27d96ad3f9c22634d9ed76984a7d7ebb85d96c062d20e low confidence tumor sample_accession: GSM4003059 sample_title: GE0089179 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 71; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003060 Runtime Siftome inference GEO:sample:GSM4003060:1ff59b21e7b137921123be6bd96652dc54d7602f8b19ed271fad0d1ea8da8cb7 low confidence tumor sample_accession: GSM4003060 sample_title: GE0089180 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 11; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003061 Runtime Siftome inference GEO:sample:GSM4003061:a318e209b090dd8810066bf267d8ac367d5c51f9894769ea9445892a22e72e4c low confidence tumor sample_accession: GSM4003061 sample_title: GE0089184 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 52; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003062 Runtime Siftome inference GEO:sample:GSM4003062:f736f0f1ee0ae940d4569119db1530fd96854aab4ce49648d92526a4fde8f46f low confidence tumor sample_accession: GSM4003062 sample_title: GE0089185 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 37; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003063 Runtime Siftome inference GEO:sample:GSM4003063:bb867d639d81ff6c255b04970a591dabcc116c76f6df46a2768c2dc4d43013ce low confidence tumor sample_accession: GSM4003063 sample_title: GE0089186 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 37; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003064 Runtime Siftome inference GEO:sample:GSM4003064:ee4d95beac125fa32ca0b665a861e6bcb2534d01a9318b7bd6288b52da9bfaff low confidence tumor sample_accession: GSM4003064 sample_title: GE0089188 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 30; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003065 Runtime Siftome inference GEO:sample:GSM4003065:6cf1c1dad59270874222bd5519071c30955c4a2a5cc397f02022d2e76df9d72f low confidence tumor sample_accession: GSM4003065 sample_title: GE0089121 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 15; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003066 Runtime Siftome inference GEO:sample:GSM4003066:ef9a431db9603fe77347e09e446c1524516b4bfcb68e68960833646f212f3142 low confidence tumor sample_accession: GSM4003066 sample_title: GE0089123 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 30; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003067 Runtime Siftome inference GEO:sample:GSM4003067:7856e7f67b9867a88c0ee2250a0e859b58772c23f30dd99fa083b9cc060ab602 low confidence tumor sample_accession: GSM4003067 sample_title: GE0089194 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 62; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003068 Runtime Siftome inference GEO:sample:GSM4003068:61bef43c0e5b2913f863db2525eb72003eb83c6d920c1258e8a8877c8701cef0 low confidence tumor sample_accession: GSM4003068 sample_title: GE0089195 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 60; immu... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003069 Runtime Siftome inference GEO:sample:GSM4003069:52ef53f38d81324b471655248f993edf0757d71979ee0861833cdcf7428d308c low confidence tumor sample_accession: GSM4003069 sample_title: GE0089196 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 57; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM4003070 Runtime Siftome inference GEO:sample:GSM4003070:627f77b0fdaa2679d625c40fb480b468fb359aa0141805d8bf3ef56fafa5643c low confidence normal sample_accession: GSM4003070 sample_title: GE0089197 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 36; imm... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM4003070 Runtime Siftome inference GEO:sample:GSM4003070:627f77b0fdaa2679d625c40fb480b468fb359aa0141805d8bf3ef56fafa5643c low confidence tumor sample_accession: GSM4003070 sample_title: GE0089197 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 36; imm... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003071 Runtime Siftome inference GEO:sample:GSM4003071:cde86a5bff177fdb1151da959b0047a50b006af883a2804489e147b80ac0ab1c low confidence tumor sample_accession: GSM4003071 sample_title: GE0089198 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 58; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003072 Runtime Siftome inference GEO:sample:GSM4003072:32be140a5345daf0ea7526a5a27fed2bdf49aa744f1600649cb049acfcba6182 low confidence tumor sample_accession: GSM4003072 sample_title: GE0089201 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 67; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003073 Runtime Siftome inference GEO:sample:GSM4003073:b2248128a22d3fc98db0ab76434a5a3ec4fb3ef0c4d9cc4d13ed16d1fc0fc8fb low confidence tumor sample_accession: GSM4003073 sample_title: GE0089203 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003074 Runtime Siftome inference GEO:sample:GSM4003074:b40092021d033414a02fb567e30e822cc1bd3d4ecba892f9ec626db47105022e low confidence tumor sample_accession: GSM4003074 sample_title: GE0089204 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 74; immun... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM4003075 Runtime Siftome inference GEO:sample:GSM4003075:8ec9c5b227cf2a0a8d4d45a5d1e61ce48d7b580259ea6defb93d751415683583 low confidence tumor sample_accession: GSM4003075 sample_title: GE0089207 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 67; immun... controlled vocabulary controlled vocabulary sample type match: tumor
tissue breast dataset GSE135298 Runtime Siftome inference GEO:dataset:GSE135298:bc85d1d32ace1ed6aab70bfe954a21da6913a2b344efdeeb0bec9c56e6a9a193 low confidence breast dataset_accession: GSE135298 dataset_title: Breast Cancer - immune clusters - RNA-seq organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available: true raw_data_ava... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002983 Runtime Siftome inference GEO:sample:GSM4002983:e449b6e8b8ac87e0b8f108b79785f9a9312da8aa2f6dc76cea0e616985a40ebf low confidence breast sample_accession: GSM4002983 sample_title: GE0081584 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 10; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002984 Runtime Siftome inference GEO:sample:GSM4002984:03f5d7be63013acfedabf0724404112d922c51959a574daf7f3ef4e9d299f421 low confidence breast sample_accession: GSM4002984 sample_title: GE0081585 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 75; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002985 Runtime Siftome inference GEO:sample:GSM4002985:6ee01f57248a230176fa2228a099244f4ea2a9181b8eaf306ecb1a37922fadf2 low confidence breast sample_accession: GSM4002985 sample_title: GE0081586 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 38; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002986 Runtime Siftome inference GEO:sample:GSM4002986:3a8cbb9e03ffa98455feff3a92de02b55719af4dcea7f82f6cd6670f7ec84edb low confidence breast sample_accession: GSM4002986 sample_title: GE0081587 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 43; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002987 Runtime Siftome inference GEO:sample:GSM4002987:c0ed9d50f8247fdf3938580f79d2c9ed7c3c7378978452b4e9fbda486f2593df low confidence breast sample_accession: GSM4002987 sample_title: GE0081588 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 92; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002988 Runtime Siftome inference GEO:sample:GSM4002988:6344b6dd2af2fc4a48defef6465516c2a477c6d24518c3517381a57ffc156f22 low confidence breast sample_accession: GSM4002988 sample_title: GE0081589 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 60; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002989 Runtime Siftome inference GEO:sample:GSM4002989:4e2317af3965664c0008dd8098760799151ce128bcd8c8968956839a6b0283f8 low confidence breast sample_accession: GSM4002989 sample_title: GE0082902 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002990 Runtime Siftome inference GEO:sample:GSM4002990:fe2111499965f5ba1cdde6f82f8651b74394c765854b1f709e9946505ae42ccb low confidence breast sample_accession: GSM4002990 sample_title: GE0082910 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 83; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002991 Runtime Siftome inference GEO:sample:GSM4002991:e44835914276249baadfc381c219caad0247fb93119c007dfa0ff43959a3850d low confidence breast sample_accession: GSM4002991 sample_title: GE0082918 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002992 Runtime Siftome inference GEO:sample:GSM4002992:c81886aa03b0f3e00b8991e3b453d88ff90c2d0ef2f4de5066f5d60614f50569 low confidence breast sample_accession: GSM4002992 sample_title: GE0082926 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 20; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002993 Runtime Siftome inference GEO:sample:GSM4002993:c7cbf4bb908831c6f9ca70445af9a9300fabe8a33802a7e7e34e1c95394f0fff low confidence breast sample_accession: GSM4002993 sample_title: GE0082934 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 62; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002994 Runtime Siftome inference GEO:sample:GSM4002994:3c7ec5b937a57230073cc4a56fc72ce399398884dd44a7c8e5f64495eb65e1b7 low confidence breast sample_accession: GSM4002994 sample_title: GE0082942 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 39; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002995 Runtime Siftome inference GEO:sample:GSM4002995:e16ea3c2978fe648ecd8eb720a8d4db537623f287f2c07bdf4412f610f3c6173 low confidence breast sample_accession: GSM4002995 sample_title: GE0082950 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 22; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002996 Runtime Siftome inference GEO:sample:GSM4002996:edbaec641c6d3dab6107279d3221d2e4438406e45038275b9a69741eefa97963 low confidence breast sample_accession: GSM4002996 sample_title: GE0082958 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 31; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002997 Runtime Siftome inference GEO:sample:GSM4002997:bba9f9926feace3195b1e468e31a3d16bef50e5d201575a46996eb851e21d4df low confidence breast sample_accession: GSM4002997 sample_title: GE0082966 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 45; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002998 Runtime Siftome inference GEO:sample:GSM4002998:1944b8a747dfd472fcedb53014b3a9a235a855fb34cb9d7407a6e373bbf00edc low confidence breast sample_accession: GSM4002998 sample_title: GE0082974 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 66; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4002999 Runtime Siftome inference GEO:sample:GSM4002999:af3e91095b10ee08318412e871234df56d6e998f80aeccc1c76df6d33ee53c16 low confidence breast sample_accession: GSM4002999 sample_title: GE0082982 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 69; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003000 Runtime Siftome inference GEO:sample:GSM4003000:08ecbc61fe553235d0a1283c03ff45c9d439e0cd1c3f232b58dcf5afb8611be5 low confidence breast sample_accession: GSM4003000 sample_title: GE0082990 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003001 Runtime Siftome inference GEO:sample:GSM4003001:4e4757c397321b760f89f00966261f344d12befcb29bf214b98096f27d1ccafa low confidence breast sample_accession: GSM4003001 sample_title: GE0083925 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 27; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003002 Runtime Siftome inference GEO:sample:GSM4003002:0290befdd3ed682058b75211b5e11f46835dd326acf1a9b9b8b2e0e0a697d625 low confidence breast sample_accession: GSM4003002 sample_title: GE0083926 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 61; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003003 Runtime Siftome inference GEO:sample:GSM4003003:87ce96d4e2cae038c698638fe40ca2aafe0e71b80583d00dcf06c7f6fcd22187 low confidence breast sample_accession: GSM4003003 sample_title: GE0084007 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 72; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003004 Runtime Siftome inference GEO:sample:GSM4003004:d2f93ea066be0b09822a5c7c08b1e46407aa458dc1562dbec1cdbe5a82496032 low confidence breast sample_accession: GSM4003004 sample_title: GE0084008 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 19; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003005 Runtime Siftome inference GEO:sample:GSM4003005:154982f48dd4bd8d473d45a359f87202471928a1fbd2dfe87328ab1d78eebaf0 low confidence breast sample_accession: GSM4003005 sample_title: GE0084009 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 32; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003006 Runtime Siftome inference GEO:sample:GSM4003006:d95c33da8e61ff87871d033608fde7189b999fa33c25ad890af55000d2983bfc low confidence breast sample_accession: GSM4003006 sample_title: GE0084010 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 23; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003007 Runtime Siftome inference GEO:sample:GSM4003007:7b8d0e9cca0a8b0b7b9d0b91ffc2f7f0d0387f8845255381a0e6f917cb0c761e low confidence breast sample_accession: GSM4003007 sample_title: GE0084013 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 53; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003008 Runtime Siftome inference GEO:sample:GSM4003008:3d9abe0ff8ad33bb8eadd0eeab1e0dd6e9bd5b7ea40c4b67ceaec200582611f9 low confidence breast sample_accession: GSM4003008 sample_title: GE0084014 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 73; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003009 Runtime Siftome inference GEO:sample:GSM4003009:12f3a083511705374550243e5dc943135bf45ae47da5812cb3d7fceea73082c3 low confidence breast sample_accession: GSM4003009 sample_title: GE0084015 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 39; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003010 Runtime Siftome inference GEO:sample:GSM4003010:d228173668bf62d6603a0d3736f052f3524402e267c52b9818cdf798ef640ec6 low confidence breast sample_accession: GSM4003010 sample_title: GE0084016 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 57; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003011 Runtime Siftome inference GEO:sample:GSM4003011:543a0dbbad332e3bdd5fd0355cbc034ad04ddc199481cdb3e1a81f98a580b42f low confidence breast sample_accession: GSM4003011 sample_title: GE0081422 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Her2; ror score: 57; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003012 Runtime Siftome inference GEO:sample:GSM4003012:f13b431e21a73fb739ba94c843200c872752d70d83946f4d66e3d50b41c4c04f low confidence breast sample_accession: GSM4003012 sample_title: GE0081423 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 8; immune... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003013 Runtime Siftome inference GEO:sample:GSM4003013:bc5965ccccacef95f1841f9a20138a1982ca04ad3005d55a31e7c66ee2cfc754 low confidence breast sample_accession: GSM4003013 sample_title: GE0081424 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 55; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003014 Runtime Siftome inference GEO:sample:GSM4003014:5e17fe3d73e030abdd0c34c2977040cc9442cb70a4fa4ea0ef0834a7b65d3b6e low confidence breast sample_accession: GSM4003014 sample_title: GE0081426 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 87; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003015 Runtime Siftome inference GEO:sample:GSM4003015:5068ee3a34cab8cccd5dae642fc92324493d1814cd397681aa51829525954179 low confidence breast sample_accession: GSM4003015 sample_title: GE0081427 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003016 Runtime Siftome inference GEO:sample:GSM4003016:d63e6386a4c3c22757237f47abf48859f3ce5cf11ff215de3f791ef05c55fac5 low confidence breast sample_accession: GSM4003016 sample_title: GE0081429 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 65; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003017 Runtime Siftome inference GEO:sample:GSM4003017:e0cf0acdbfdf192a8185c6929433724aa834c61943ba56f457b02ab427ff1264 low confidence breast sample_accession: GSM4003017 sample_title: GE0081430 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 38; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003018 Runtime Siftome inference GEO:sample:GSM4003018:030d2853ba8151e41f3631f7a298d24c978f7af82c6582f7b5fec154a4f51d1b low confidence breast sample_accession: GSM4003018 sample_title: GE0081431 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 32; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003019 Runtime Siftome inference GEO:sample:GSM4003019:1e580151198e0c51c9baea9c6d91e63cbca50b7bb5e1a500df542bd8022874d9 low confidence breast sample_accession: GSM4003019 sample_title: GE0081432 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 26; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003020 Runtime Siftome inference GEO:sample:GSM4003020:2081505cf5b89f81faa379085c87f2a4431edda8da0eadca6bd4dfa5d5acdc11 low confidence breast sample_accession: GSM4003020 sample_title: GE0081433 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 39; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003021 Runtime Siftome inference GEO:sample:GSM4003021:db84dbb53806964da3c8ba672ed734fdd2e7be899bd50d3d9ffa551402ddbd7e low confidence breast sample_accession: GSM4003021 sample_title: GE0081434 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003022 Runtime Siftome inference GEO:sample:GSM4003022:5b9a91e69eb79ece79538920aa464815d19c4b35fc9a202f5753ecbea4f7ac74 low confidence breast sample_accession: GSM4003022 sample_title: GE0081435 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 60; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003023 Runtime Siftome inference GEO:sample:GSM4003023:5b8d828ae4cf08d4f716f72dace89b4236fd29f3273e39ca4f48c1e39668eb27 low confidence breast sample_accession: GSM4003023 sample_title: GE0081436 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 55; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003024 Runtime Siftome inference GEO:sample:GSM4003024:48a1110f8b9454245bbb84170ca925c930ffce53d31d923663ff9503a9658b32 low confidence breast sample_accession: GSM4003024 sample_title: GE0081438 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 15; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003025 Runtime Siftome inference GEO:sample:GSM4003025:355d3dcdb89b791b1f1ba30c35364435fb5e330a8170f3a77ef7d54af62779c3 low confidence breast sample_accession: GSM4003025 sample_title: GE0081439 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 21; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003026 Runtime Siftome inference GEO:sample:GSM4003026:3a11abffce59f7d6691b16825fff8558872561eb79a1505730dd21c27503da37 low confidence breast sample_accession: GSM4003026 sample_title: GE0081440 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 40; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003027 Runtime Siftome inference GEO:sample:GSM4003027:a8d8af63753b51b127dbc86e3508da7a4e495a383d360836af79b7f219c48916 low confidence breast sample_accession: GSM4003027 sample_title: GE0081441 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003028 Runtime Siftome inference GEO:sample:GSM4003028:ea681cefd85f41e4a0575f0ae113404b94eb673c462148721784cad756878a6b low confidence breast sample_accession: GSM4003028 sample_title: GE0081444 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 76; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003029 Runtime Siftome inference GEO:sample:GSM4003029:132ed2eda4e224afdfc71b784361ef2bb18cdd2686bb1ce4b784306081dd68c3 low confidence breast sample_accession: GSM4003029 sample_title: GE0081445 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 14; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003030 Runtime Siftome inference GEO:sample:GSM4003030:a00eb2b3a1caea91d0dce812ea1fd7ca83b240579f4028caacd22e13981aed7f low confidence breast sample_accession: GSM4003030 sample_title: GE0083368 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003031 Runtime Siftome inference GEO:sample:GSM4003031:6874a477934ed15e5aa56e8fb230f7333ff388c2b72a42fc1214547e791f299c low confidence breast sample_accession: GSM4003031 sample_title: GE0083384 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 80; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003032 Runtime Siftome inference GEO:sample:GSM4003032:2a917329e5db5d9fe746e45ca238070a2a2b373913b6b85613b7812c7e3e21bd low confidence breast sample_accession: GSM4003032 sample_title: GE0083392 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 46; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003033 Runtime Siftome inference GEO:sample:GSM4003033:57cd21e996576bc344f5554dc80c95f80db14c1daddfe23512cf8a9bf6c7bdbf low confidence breast sample_accession: GSM4003033 sample_title: GE0083400 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Basal; ror score: 46; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003034 Runtime Siftome inference GEO:sample:GSM4003034:4a8b498ecb00410f8db628cb9870c41a7d889870cf4d3395a835bea881604e6d low confidence breast sample_accession: GSM4003034 sample_title: GE0083408 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 48; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003035 Runtime Siftome inference GEO:sample:GSM4003035:7fbb786cac897b31ba74661fa802a9c5c684a0b60ee605a53af49e6fb5d7d540 low confidence breast sample_accession: GSM4003035 sample_title: GE0083416 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 11; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003036 Runtime Siftome inference GEO:sample:GSM4003036:9ac90658f84861a42e9451f06fd818755bee97b9d8758aeb30ba642fc6d02dd5 low confidence breast sample_accession: GSM4003036 sample_title: GE0083424 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 68; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003037 Runtime Siftome inference GEO:sample:GSM4003037:b360a923723333a98df7ea42efd8d6d1bf1503a8bd75124186aed7e08705411a low confidence breast sample_accession: GSM4003037 sample_title: GE0083448 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 69; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003038 Runtime Siftome inference GEO:sample:GSM4003038:73daf296f11307e57829a2b03667151109c815df6cf7793ead371fffda586019 low confidence breast sample_accession: GSM4003038 sample_title: GE0083464 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 42; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003039 Runtime Siftome inference GEO:sample:GSM4003039:ddcbd12f7d8cc72a417269c5fa430d5ad3887543b9d322b6cea5b27fea1b6928 low confidence breast sample_accession: GSM4003039 sample_title: GE0083512 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 28; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003040 Runtime Siftome inference GEO:sample:GSM4003040:61b0daf7fc71a537e79a49adfb7ad9fb3e3ba3b4a9b1f439c968a62a6e54d2c3 low confidence breast sample_accession: GSM4003040 sample_title: GE0083544 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 62; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003041 Runtime Siftome inference GEO:sample:GSM4003041:d115c5ecf803833adf7bbad25119d99b3e56c54bc46c71aa5948f63c26f659f7 low confidence breast sample_accession: GSM4003041 sample_title: GE0083552 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 24; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003042 Runtime Siftome inference GEO:sample:GSM4003042:dc58468b08b44b8e506a4e51a351a956548ca14b12710d3fb23444117bafa641 low confidence breast sample_accession: GSM4003042 sample_title: GE0083568 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 60; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003043 Runtime Siftome inference GEO:sample:GSM4003043:d415def9cd6e39be617b665f510b36119dd2ea5793575072270a9d7c7ed57edb low confidence breast sample_accession: GSM4003043 sample_title: GE0083576 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 62; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003044 Runtime Siftome inference GEO:sample:GSM4003044:0cd2e41960d18e65f102b98fc7b44fa7cca30d314a601ad190c5d3e4f4de40ae low confidence breast sample_accession: GSM4003044 sample_title: GE0083600 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 49; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003045 Runtime Siftome inference GEO:sample:GSM4003045:dffae852cf5c11d75684d0cd77eb74737110bef0e557d87eb0586e532ef96c52 low confidence breast sample_accession: GSM4003045 sample_title: GE0083608 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 64; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003046 Runtime Siftome inference GEO:sample:GSM4003046:aab2f5f0e1d007b35d002af3bf5cf0668302a09c7c345bbc6b8e193cefe65e47 low confidence breast sample_accession: GSM4003046 sample_title: GE0083632 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 69; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003047 Runtime Siftome inference GEO:sample:GSM4003047:3acf21dc2befcb13a726475a5a0f90fb6399680d91de79f6435fa04fcc3f642c low confidence breast sample_accession: GSM4003047 sample_title: GE0083640 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 76; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003048 Runtime Siftome inference GEO:sample:GSM4003048:9276263097f1103082f05c5f300086e5d6ca3c3dc6d9231a316029e76a08fecf low confidence breast sample_accession: GSM4003048 sample_title: GE0083664 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 41; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003049 Runtime Siftome inference GEO:sample:GSM4003049:a801e1735cdf0168392d7843d1ead978b16b1bfd5f04bd90649b80d337215aa4 low confidence breast sample_accession: GSM4003049 sample_title: GE0083672 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 56; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003050 Runtime Siftome inference GEO:sample:GSM4003050:1d82ab7c2ffa447241aa069aed504bdd2e6cc01f9fb083ae0afe2d55568b77d2 low confidence breast sample_accession: GSM4003050 sample_title: GE0083680 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 62; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003051 Runtime Siftome inference GEO:sample:GSM4003051:388b2af5178ac44a57cc83f84469c4415aba12d3eb613bab8a27c43fa0b62f9c low confidence breast sample_accession: GSM4003051 sample_title: GE0083696 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 83; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003052 Runtime Siftome inference GEO:sample:GSM4003052:e9a3ad475eb98a443bee02e5ea0a2e3a7d6cb23144a31ef32dce2f1c1b57425f low confidence breast sample_accession: GSM4003052 sample_title: GE0083704 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 45; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003053 Runtime Siftome inference GEO:sample:GSM4003053:78efeb0c1eaf98c5999996e9d6e4fcdde60e8721909cc0543f39b475e9a79908 low confidence breast sample_accession: GSM4003053 sample_title: GE0083720 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 20; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003054 Runtime Siftome inference GEO:sample:GSM4003054:0a5752362fb9eb635df84b3e5a8ae64d56bced183099b5d931b07b2c70462548 low confidence breast sample_accession: GSM4003054 sample_title: GE0083728 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 67; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003055 Runtime Siftome inference GEO:sample:GSM4003055:d46e11ff32aeaa6c02fdf0f69f1c042a4cfd409e3328104776eec3680f548a65 low confidence breast sample_accession: GSM4003055 sample_title: GE0083768 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 51; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003056 Runtime Siftome inference GEO:sample:GSM4003056:ec64bbe53a334004318287005a3908a0a513c660961be0a3a44690eec394fcad low confidence breast sample_accession: GSM4003056 sample_title: GE0089175 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 50; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003057 Runtime Siftome inference GEO:sample:GSM4003057:7d0c5dd17fbf3d99305476cad3cd2ee2e1870a8466887acdbf7bc886ac9dc3b2 low confidence breast sample_accession: GSM4003057 sample_title: GE0089177 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 26; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003058 Runtime Siftome inference GEO:sample:GSM4003058:af21e5cf250e8d35539d4f8340e8c950f260608ee84d7e6f58eec2edd5ae2b61 low confidence breast sample_accession: GSM4003058 sample_title: GE0089178 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 63; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003059 Runtime Siftome inference GEO:sample:GSM4003059:b9d38d4bc8ee762ba7f27d96ad3f9c22634d9ed76984a7d7ebb85d96c062d20e low confidence breast sample_accession: GSM4003059 sample_title: GE0089179 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 71; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003060 Runtime Siftome inference GEO:sample:GSM4003060:1ff59b21e7b137921123be6bd96652dc54d7602f8b19ed271fad0d1ea8da8cb7 low confidence breast sample_accession: GSM4003060 sample_title: GE0089180 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 11; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003061 Runtime Siftome inference GEO:sample:GSM4003061:a318e209b090dd8810066bf267d8ac367d5c51f9894769ea9445892a22e72e4c low confidence breast sample_accession: GSM4003061 sample_title: GE0089184 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 52; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003062 Runtime Siftome inference GEO:sample:GSM4003062:f736f0f1ee0ae940d4569119db1530fd96854aab4ce49648d92526a4fde8f46f low confidence breast sample_accession: GSM4003062 sample_title: GE0089185 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 37; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003063 Runtime Siftome inference GEO:sample:GSM4003063:bb867d639d81ff6c255b04970a591dabcc116c76f6df46a2768c2dc4d43013ce low confidence breast sample_accession: GSM4003063 sample_title: GE0089186 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 37; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003064 Runtime Siftome inference GEO:sample:GSM4003064:ee4d95beac125fa32ca0b665a861e6bcb2534d01a9318b7bd6288b52da9bfaff low confidence breast sample_accession: GSM4003064 sample_title: GE0089188 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 30; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003065 Runtime Siftome inference GEO:sample:GSM4003065:6cf1c1dad59270874222bd5519071c30955c4a2a5cc397f02022d2e76df9d72f low confidence breast sample_accession: GSM4003065 sample_title: GE0089121 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 15; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003066 Runtime Siftome inference GEO:sample:GSM4003066:ef9a431db9603fe77347e09e446c1524516b4bfcb68e68960833646f212f3142 low confidence breast sample_accession: GSM4003066 sample_title: GE0089123 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 30; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003067 Runtime Siftome inference GEO:sample:GSM4003067:7856e7f67b9867a88c0ee2250a0e859b58772c23f30dd99fa083b9cc060ab602 low confidence breast sample_accession: GSM4003067 sample_title: GE0089194 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 62; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003068 Runtime Siftome inference GEO:sample:GSM4003068:61bef43c0e5b2913f863db2525eb72003eb83c6d920c1258e8a8877c8701cef0 low confidence breast sample_accession: GSM4003068 sample_title: GE0089195 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 60; immu... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003069 Runtime Siftome inference GEO:sample:GSM4003069:52ef53f38d81324b471655248f993edf0757d71979ee0861833cdcf7428d308c low confidence breast sample_accession: GSM4003069 sample_title: GE0089196 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 57; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003070 Runtime Siftome inference GEO:sample:GSM4003070:627f77b0fdaa2679d625c40fb480b468fb359aa0141805d8bf3ef56fafa5643c low confidence breast sample_accession: GSM4003070 sample_title: GE0089197 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 36; imm... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003071 Runtime Siftome inference GEO:sample:GSM4003071:cde86a5bff177fdb1151da959b0047a50b006af883a2804489e147b80ac0ab1c low confidence breast sample_accession: GSM4003071 sample_title: GE0089198 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 58; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003072 Runtime Siftome inference GEO:sample:GSM4003072:32be140a5345daf0ea7526a5a27fed2bdf49aa744f1600649cb049acfcba6182 low confidence breast sample_accession: GSM4003072 sample_title: GE0089201 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 67; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003073 Runtime Siftome inference GEO:sample:GSM4003073:b2248128a22d3fc98db0ab76434a5a3ec4fb3ef0c4d9cc4d13ed16d1fc0fc8fb low confidence breast sample_accession: GSM4003073 sample_title: GE0089203 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003074 Runtime Siftome inference GEO:sample:GSM4003074:b40092021d033414a02fb567e30e822cc1bd3d4ecba892f9ec626db47105022e low confidence breast sample_accession: GSM4003074 sample_title: GE0089204 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 74; immun... controlled vocabulary controlled vocabulary tissue match: breast
tissue breast sample GSM4003075 Runtime Siftome inference GEO:sample:GSM4003075:8ec9c5b227cf2a0a8d4d45a5d1e61ce48d7b580259ea6defb93d751415683583 low confidence breast sample_accession: GSM4003075 sample_title: GE0089207 source_name: Breast characteristics: tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 67; immun... controlled vocabulary controlled vocabulary tissue match: breast

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

82
  • GSM4002984 GE0081585 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 75; immune cluster: ClusterA
  • GSM4002985 GE0081586 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 38; immune cluster: ClusterA
  • GSM4002986 GE0081587 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 43; immune cluster: ClusterB
  • GSM4002987 GE0081588 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 92; immune cluster: ClusterA
  • GSM4002988 GE0081589 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 60; immune cluster: ClusterA
  • GSM4002990 GE0082910 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 83; immune cluster: ClusterC
  • GSM4002991 GE0082918 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immune cluster: ClusterA
  • GSM4002992 GE0082926 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 20; immune cluster: ClusterA
  • GSM4002993 GE0082934 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 62; immune cluster: ClusterA
  • GSM4002994 GE0082942 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 39; immune cluster: ClusterA
  • GSM4002995 GE0082950 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 22; immune cluster: ClusterA
  • GSM4002996 GE0082958 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 31; immune cluster: ClusterA
  • GSM4002997 GE0082966 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 45; immune cluster: ClusterB
  • GSM4002998 GE0082974 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 66; immune cluster: ClusterA
  • GSM4002999 GE0082982 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 69; immune cluster: ClusterB
  • GSM4003000 GE0082990 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immune cluster: ClusterA
  • GSM4003001 GE0083925 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 27; immune cluster: ClusterA
  • GSM4003002 GE0083926 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 61; immune cluster: ClusterA
  • GSM4003003 GE0084007 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 72; immune cluster: ClusterC
  • GSM4003004 GE0084008 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 19; immune cluster: ClusterA
  • GSM4003005 GE0084009 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 32; immune cluster: ClusterA
  • GSM4003006 GE0084010 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 23; immune cluster: ClusterB
  • GSM4003007 GE0084013 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 53; immune cluster: ClusterA
  • GSM4003008 GE0084014 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 73; immune cluster: ClusterB
  • GSM4003009 GE0084015 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 39; immune cluster: ClusterA
  • GSM4003010 GE0084016 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 57; immune cluster: ClusterA
  • GSM4003011 GE0081422 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Her2; ror score: 57; immune cluster: ClusterB
  • GSM4003012 GE0081423 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 8; immune cluster: ClusterB
  • GSM4003014 GE0081426 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 87; immune cluster: ClusterC
  • GSM4003015 GE0081427 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immune cluster: ClusterA
  • GSM4003016 GE0081429 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 65; immune cluster: ClusterA
  • GSM4003018 GE0081431 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 32; immune cluster: ClusterA
  • GSM4003019 GE0081432 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 26; immune cluster: ClusterA
  • GSM4003020 GE0081433 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 39; immune cluster: ClusterA
  • GSM4003021 GE0081434 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immune cluster: ClusterA
  • GSM4003022 GE0081435 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 60; immune cluster: ClusterA
  • GSM4003023 GE0081436 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 55; immune cluster: ClusterC
  • GSM4003024 GE0081438 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 15; immune cluster: ClusterA
  • GSM4003025 GE0081439 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 21; immune cluster: ClusterA
  • GSM4003028 GE0081444 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 76; immune cluster: ClusterB
  • GSM4003030 GE0083368 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immune cluster: ClusterA
  • GSM4003031 GE0083384 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 80; immune cluster: ClusterC
  • GSM4003032 GE0083392 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 46; immune cluster: ClusterA
  • GSM4003033 GE0083400 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Basal; ror score: 46; immune cluster: ClusterB
  • GSM4003034 GE0083408 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 48; immune cluster: ClusterC
  • GSM4003035 GE0083416 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 11; immune cluster: ClusterA
  • GSM4003036 GE0083424 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 68; immune cluster: ClusterA
  • GSM4003037 GE0083448 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 69; immune cluster: ClusterC
  • GSM4003039 GE0083512 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 28; immune cluster: ClusterA
  • GSM4003040 GE0083544 tumor sample Case marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 62; immune cluster: ClusterB

32 more samples are hidden from this preview.

Possible control samples

Samples currently treated as controls or baseline.

11
  • GSM4002983 GE0081584 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 10; immune cluster: ClusterA
  • GSM4002989 GE0082902 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; immune cluster: ClusterB
  • GSM4003013 GE0081424 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 55; immune cluster: ClusterB
  • GSM4003017 GE0081430 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 38; immune cluster: ClusterC
  • GSM4003026 GE0081440 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 40; immune cluster: ClusterB
  • GSM4003027 GE0081441 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; immune cluster: ClusterA
  • GSM4003029 GE0081445 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 14; immune cluster: ClusterB
  • GSM4003038 GE0083464 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 42; immune cluster: ClusterC
  • GSM4003045 GE0083608 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 64; immune cluster: ClusterA
  • GSM4003047 GE0083640 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 76; immune cluster: ClusterA
  • GSM4003070 GE0089197 normal tissue Control marker detected. Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 36; immune cluster: ClusterB

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

100 pts
Clarity
100%
Weight
100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

normal tissue

11 samples
  • GSM4002983 GE0081584 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 10; immune cluster: ClusterA
  • GSM4002989 GE0082902 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; immune cluster: ClusterB
  • GSM4003013 GE0081424 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 55; immune cluster: ClusterB
  • GSM4003017 GE0081430 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 38; immune cluster: ClusterC
  • GSM4003026 GE0081440 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 40; immune cluster: ClusterB
  • GSM4003027 GE0081441 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 19; immune cluster: ClusterA
  • GSM4003029 GE0081445 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 14; immune cluster: ClusterB
  • GSM4003038 GE0083464 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 42; immune cluster: ClusterC
  • GSM4003045 GE0083608 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 64; immune cluster: ClusterA
  • GSM4003047 GE0083640 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 76; immune cluster: ClusterA
  • GSM4003070 GE0089197 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Normal; ror score: 36; immune cluster: ClusterB

tumor sample

82 samples
  • GSM4002984 GE0081585 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 75; immune cluster: ClusterA
  • GSM4002985 GE0081586 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 38; immune cluster: ClusterA
  • GSM4002986 GE0081587 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 43; immune cluster: ClusterB
  • GSM4002987 GE0081588 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 92; immune cluster: ClusterA
  • GSM4002988 GE0081589 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 60; immune cluster: ClusterA
  • GSM4002990 GE0082910 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 83; immune cluster: ClusterC
  • GSM4002991 GE0082918 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immune cluster: ClusterA
  • GSM4002992 GE0082926 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 20; immune cluster: ClusterA
  • GSM4002993 GE0082934 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 62; immune cluster: ClusterA
  • GSM4002994 GE0082942 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 39; immune cluster: ClusterA
  • GSM4002995 GE0082950 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 22; immune cluster: ClusterA
  • GSM4002996 GE0082958 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 31; immune cluster: ClusterA
  • GSM4002997 GE0082966 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 45; immune cluster: ClusterB
  • GSM4002998 GE0082974 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 66; immune cluster: ClusterA
  • GSM4002999 GE0082982 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 69; immune cluster: ClusterB
  • GSM4003000 GE0082990 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immune cluster: ClusterA
  • GSM4003001 GE0083925 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 27; immune cluster: ClusterA
  • GSM4003002 GE0083926 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 61; immune cluster: ClusterA
  • GSM4003003 GE0084007 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 72; immune cluster: ClusterC
  • GSM4003004 GE0084008 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 19; immune cluster: ClusterA
  • GSM4003005 GE0084009 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 32; immune cluster: ClusterA
  • GSM4003006 GE0084010 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 23; immune cluster: ClusterB
  • GSM4003007 GE0084013 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 53; immune cluster: ClusterA
  • GSM4003008 GE0084014 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 73; immune cluster: ClusterB
  • GSM4003009 GE0084015 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 39; immune cluster: ClusterA
  • GSM4003010 GE0084016 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 57; immune cluster: ClusterA
  • GSM4003011 GE0081422 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Her2; ror score: 57; immune cluster: ClusterB
  • GSM4003012 GE0081423 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 8; immune cluster: ClusterB
  • GSM4003014 GE0081426 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 87; immune cluster: ClusterC
  • GSM4003015 GE0081427 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immune cluster: ClusterA
  • GSM4003016 GE0081429 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 65; immune cluster: ClusterA
  • GSM4003018 GE0081431 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 32; immune cluster: ClusterA
  • GSM4003019 GE0081432 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 26; immune cluster: ClusterA
  • GSM4003020 GE0081433 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 39; immune cluster: ClusterA
  • GSM4003021 GE0081434 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 36; immune cluster: ClusterA
  • GSM4003022 GE0081435 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 60; immune cluster: ClusterA
  • GSM4003023 GE0081436 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 55; immune cluster: ClusterC
  • GSM4003024 GE0081438 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 15; immune cluster: ClusterA
  • GSM4003025 GE0081439 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 21; immune cluster: ClusterA
  • GSM4003028 GE0081444 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 76; immune cluster: ClusterB
  • GSM4003030 GE0083368 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immune cluster: ClusterA
  • GSM4003031 GE0083384 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 80; immune cluster: ClusterC
  • GSM4003032 GE0083392 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 46; immune cluster: ClusterA
  • GSM4003033 GE0083400 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: Basal; ror score: 46; immune cluster: ClusterB
  • GSM4003034 GE0083408 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 48; immune cluster: ClusterC
  • GSM4003035 GE0083416 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 11; immune cluster: ClusterA
  • GSM4003036 GE0083424 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 68; immune cluster: ClusterA
  • GSM4003037 GE0083448 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 69; immune cluster: ClusterC
  • GSM4003039 GE0083512 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 28; immune cluster: ClusterA
  • GSM4003040 GE0083544 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 62; immune cluster: ClusterB
  • GSM4003041 GE0083552 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 24; immune cluster: ClusterA
  • GSM4003042 GE0083568 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 60; immune cluster: ClusterC
  • GSM4003043 GE0083576 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 62; immune cluster: ClusterA
  • GSM4003044 GE0083600 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 49; immune cluster: ClusterA
  • GSM4003046 GE0083632 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 69; immune cluster: ClusterA
  • GSM4003048 GE0083664 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 41; immune cluster: ClusterA
  • GSM4003049 GE0083672 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 56; immune cluster: ClusterC
  • GSM4003050 GE0083680 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 62; immune cluster: ClusterC
  • GSM4003051 GE0083696 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 83; immune cluster: ClusterC
  • GSM4003052 GE0083704 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 45; immune cluster: ClusterC
  • GSM4003053 GE0083720 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 20; immune cluster: ClusterA
  • GSM4003054 GE0083728 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 67; immune cluster: ClusterC
  • GSM4003055 GE0083768 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 51; immune cluster: ClusterA
  • GSM4003056 GE0089175 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 50; immune cluster: ClusterA
  • GSM4003057 GE0089177 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 26; immune cluster: ClusterB
  • GSM4003058 GE0089178 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 63; immune cluster: ClusterA
  • GSM4003059 GE0089179 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 71; immune cluster: ClusterC
  • GSM4003060 GE0089180 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 11; immune cluster: ClusterA
  • GSM4003061 GE0089184 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 52; immune cluster: ClusterA
  • GSM4003062 GE0089185 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 37; immune cluster: ClusterB
  • GSM4003063 GE0089186 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 37; immune cluster: ClusterA
  • GSM4003064 GE0089188 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 30; immune cluster: ClusterA
  • GSM4003065 GE0089121 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 15; immune cluster: ClusterA
  • GSM4003066 GE0089123 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 30; immune cluster: ClusterA
  • GSM4003067 GE0089194 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 62; immune cluster: ClusterC
  • GSM4003068 GE0089195 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Basal; ror score: 60; immune cluster: ClusterC
  • GSM4003069 GE0089196 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 57; immune cluster: ClusterA
  • GSM4003071 GE0089198 Breast tissue: Breast; disease state: Tumor; er status: Neg; pam50: Her2; ror score: 58; immune cluster: ClusterC
  • GSM4003072 GE0089201 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 67; immune cluster: ClusterA
  • GSM4003073 GE0089203 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumA; ror score: 47; immune cluster: ClusterB
  • GSM4003074 GE0089204 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 74; immune cluster: ClusterB
  • GSM4003075 GE0089207 Breast tissue: Breast; disease state: Tumor; er status: Pos; pam50: LumB; ror score: 67; immune cluster: ClusterB

Score Breakdown

100%

relevance

  • Disease or condition metadata normalized.
  • Organism normalized.
  • Assay type normalized.
  • Tissue metadata normalized.
0%

comparison suitability

  • Tumor and normal sample groups detected.
  • No excluded sample type flags detected.
  • Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
  • Patient tissue or biopsy specimens boosted for tissue comparison triage.
  • Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
100%

metadata quality

  • Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
  • Group clarity: Rule-based grouping found both case and control samples.
  • Disease clarity: Disease or condition metadata normalized.
  • Tissue clarity: Tissue metadata normalized.
  • Treatment clarity: No unclear treatment split detected in the sample metadata.
  • Replicate clarity: No pooled sample or technical replicate flags detected.
  • Data availability clarity: Dataset-level processed or raw data availability is explicit.
100%

data availability

  • Processed data available.
  • Raw data available.
34%

overall

  • Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Sample Links

93 samples

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.