Expectations
- Organism
- Homo sapiens
- Assay
- bulk RNA-seq
- Specimen/source
- patient tissue or biopsy
- Controls
- matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control
Siftome Phase 3L
GSE140343Both case and control groups are present in the proposed grouping.
Each contrast group has at least 2 samples.
Processed data is marked available in the GEO index.
All samples are assigned to a case or control group.
No dataset warnings are present.
Metadata quality is high enough to support downstream handoff.
No readiness blockers detected.
Siftome proposed case and control labels, but no reviewer confirmation is stored yet.
Open the sample grouping CSV and confirm group labels before analysis.Both groups meet the minimum of 2 samples.
Confirm whether the cohort is large enough for the intended statistical analysis.Processed data availability is marked true in the GEO index.
Verify that downloaded processed files contain usable count or expression identifiers.No review-needed or unassigned samples are present in the proposed grouping.
Still scan the grouping table for biology-specific ambiguity.No hard-excluded samples were detected by the current rules.
Record any manual exclusions in the downstream analysis notes.The dataset and sample accessions can be linked back to GEO.
Keep GEO dataset and sample links with exported metadata.Proceed only after the analyst confirms grouping, exclusions, and source files.
No expert-review triggers were detected by Siftome.
No ranking warnings are active.
No active review decisions affect this ranking.
No active manual corrections are applied to this dataset.
Homo sapiens
dataset_accession: GSE140343 organism: Homo sapiens dataset_title: Gene expression profile of clinical LUAD tumors and their paired non-cancerous adjacent tissues by RNA-seq analysis
bulk RNA-seq
assay_type: bulk RNA-seq experiment_types: Expression profiling by high throughput sequencing platforms: GPL20795 HiSeq X Ten (Homo sapiens) dataset_title: Gene expression profile of clinical LUAD tumors and their paired non-cancerous adjacent tissues by RNA-seq analysis
Tumor vs unmatched normal
dataset_title: Gene expression profile of clinical LUAD tumors and their paired non-cancerous adjacent tissues by RNA-seq analysis experiment_types: Expression profiling by high throughput sequencing sample_context: GSM4159498: source_name=LUAD; characteristics=tissue: Lung; age: 73 GSM4159499: source_name=LUAD; characteristics=tissue: Lung; age: 55 GSM4159500: source_name=LUAD; characteristics=tissue: Lung; age: 56 GSM4159501: source_name=LUAD; characteristics=tissue: Lung; age: 57 GSM4159502: source_name=LUAD; characteristics=tissue: Lung; age: 42 GSM4159503: source_name=LUAD; characteristics=tissue: Lung; age: 54
Tissue
dataset_title: Gene expression profile of clinical LUAD tumors and their paired non-cancerous adjacent tissues by RNA-seq analysis sample_context: GSM4159498: source_name=LUAD; characteristics=tissue: Lung; age: 73 GSM4159499: source_name=LUAD; characteristics=tissue: Lung; age: 55 GSM4159500: source_name=LUAD; characteristics=tissue: Lung; age: 56 GSM4159501: source_name=LUAD; characteristics=tissue: Lung; age: 57 GSM4159502: source_name=LUAD; characteristics=tissue: Lung; age: 42 GSM4159503: source_name=LUAD; characteristics=tissue: Lung; age: 54
lung cancer
dataset_title: Gene expression profile of clinical LUAD tumors and their paired non-cancerous adjacent tissues by RNA-seq analysis sample_context: GSM4159498: source_name=LUAD; characteristics=tissue: Lung; age: 73 GSM4159499: source_name=LUAD; characteristics=tissue: Lung; age: 55 GSM4159500: source_name=LUAD; characteristics=tissue: Lung; age: 56 GSM4159501: source_name=LUAD; characteristics=tissue: Lung; age: 57 GSM4159502: source_name=LUAD; characteristics=tissue: Lung; age: 42 GSM4159503: source_name=LUAD; characteristics=tissue: Lung; age: 54
Eligible for Patient tissue tumor-vs-normal as Not suitable
dataset_accession: GSE140343 dataset_title: Gene expression profile of clinical LUAD tumors and their paired non-cancerous adjacent tissues by RNA-seq analysis organism: Homo sapiens assay_type: bulk RNA-seq sample_context: GSM4159498: source_name=LUAD; characteristics=tissue: Lung; age: 73 GSM4159499: source_name=LUAD; characteristics=tissue: Lung; age: 55 GSM4159500: source_name=LUAD; characteristics=tissue: Lung; age: 56 GSM4159501: source_name=LUAD; characteristics=tissue: Lung; age: 57 GSM4159502: source_name=LUAD; characteristics=tissue: Lung; age: 42 GSM4159503: source_name=LUAD; characteristics=tissue: Lung; age: 54
Eligible for Patient tissue tumor-vs-normal as Not suitable
dataset_accession: GSE140343 dataset_title: Gene expression profile of clinical LUAD tumors and their paired non-cancerous adjacent tissues by RNA-seq analysis organism: Homo sapiens assay_type: bulk RNA-seq sample_context: GSM4159498: source_name=LUAD; characteristics=tissue: Lung; age: 73 GSM4159499: source_name=LUAD; characteristics=tissue: Lung; age: 55 GSM4159500: source_name=LUAD; characteristics=tissue: Lung; age: 56 GSM4159501: source_name=LUAD; characteristics=tissue: Lung; age: 57 GSM4159502: source_name=LUAD; characteristics=tissue: Lung; age: 42 GSM4159503: source_name=LUAD; characteristics=tissue: Lung; age: 54
lung cancer (case)
sample_accession: GSM4159498 sample_title: RNA-seq_LADC17 source_name: LUAD characteristics: tissue: Lung; age: 73
Included in derived sample grouping as lung cancer
sample_accession: GSM4159498 sample_title: RNA-seq_LADC17 source_name: LUAD characteristics: tissue: Lung; age: 73
lung cancer (case)
sample_accession: GSM4159499 sample_title: RNA-seq_LADC18 source_name: LUAD characteristics: tissue: Lung; age: 55
Included in derived sample grouping as lung cancer
sample_accession: GSM4159499 sample_title: RNA-seq_LADC18 source_name: LUAD characteristics: tissue: Lung; age: 55
lung cancer (case)
sample_accession: GSM4159500 sample_title: RNA-seq_LADC19 source_name: LUAD characteristics: tissue: Lung; age: 56
Included in derived sample grouping as lung cancer
sample_accession: GSM4159500 sample_title: RNA-seq_LADC19 source_name: LUAD characteristics: tissue: Lung; age: 56
lung cancer (case)
sample_accession: GSM4159501 sample_title: RNA-seq_LADC20 source_name: LUAD characteristics: tissue: Lung; age: 57
Included in derived sample grouping as lung cancer
sample_accession: GSM4159501 sample_title: RNA-seq_LADC20 source_name: LUAD characteristics: tissue: Lung; age: 57
lung cancer (case)
sample_accession: GSM4159502 sample_title: RNA-seq_LADC22 source_name: LUAD characteristics: tissue: Lung; age: 42
Included in derived sample grouping as lung cancer
sample_accession: GSM4159502 sample_title: RNA-seq_LADC22 source_name: LUAD characteristics: tissue: Lung; age: 42
lung cancer (case)
sample_accession: GSM4159503 sample_title: RNA-seq_LADC23 source_name: LUAD characteristics: tissue: Lung; age: 54
Included in derived sample grouping as lung cancer
sample_accession: GSM4159503 sample_title: RNA-seq_LADC23 source_name: LUAD characteristics: tissue: Lung; age: 54
lung cancer (case)
sample_accession: GSM4159504 sample_title: RNA-seq_LADC24 source_name: LUAD characteristics: tissue: Lung; age: 73
Included in derived sample grouping as lung cancer
sample_accession: GSM4159504 sample_title: RNA-seq_LADC24 source_name: LUAD characteristics: tissue: Lung; age: 73
lung cancer (case)
sample_accession: GSM4159505 sample_title: RNA-seq_LADC25 source_name: LUAD characteristics: tissue: Lung; age: 61
Included in derived sample grouping as lung cancer
sample_accession: GSM4159505 sample_title: RNA-seq_LADC25 source_name: LUAD characteristics: tissue: Lung; age: 61
lung cancer (case)
sample_accession: GSM4159506 sample_title: RNA-seq_LADC26 source_name: LUAD characteristics: tissue: Lung; age: 64
Included in derived sample grouping as lung cancer
sample_accession: GSM4159506 sample_title: RNA-seq_LADC26 source_name: LUAD characteristics: tissue: Lung; age: 64
lung cancer (case)
sample_accession: GSM4159507 sample_title: RNA-seq_LADC27 source_name: LUAD characteristics: tissue: Lung; age: 31
Included in derived sample grouping as lung cancer
sample_accession: GSM4159507 sample_title: RNA-seq_LADC27 source_name: LUAD characteristics: tissue: Lung; age: 31
lung cancer (case)
sample_accession: GSM4159508 sample_title: RNA-seq_LADC28 source_name: LUAD characteristics: tissue: Lung; age: 61
Included in derived sample grouping as lung cancer
sample_accession: GSM4159508 sample_title: RNA-seq_LADC28 source_name: LUAD characteristics: tissue: Lung; age: 61
lung cancer (case)
sample_accession: GSM4159509 sample_title: RNA-seq_LADC29 source_name: LUAD characteristics: tissue: Lung; age: 73
Included in derived sample grouping as lung cancer
sample_accession: GSM4159509 sample_title: RNA-seq_LADC29 source_name: LUAD characteristics: tissue: Lung; age: 73
lung cancer (case)
sample_accession: GSM4159510 sample_title: RNA-seq_LADC30 source_name: LUAD characteristics: tissue: Lung; age: 67
Included in derived sample grouping as lung cancer
sample_accession: GSM4159510 sample_title: RNA-seq_LADC30 source_name: LUAD characteristics: tissue: Lung; age: 67
lung cancer (case)
sample_accession: GSM4159511 sample_title: RNA-seq_LADC33 source_name: LUAD characteristics: tissue: Lung; age: 52
Included in derived sample grouping as lung cancer
sample_accession: GSM4159511 sample_title: RNA-seq_LADC33 source_name: LUAD characteristics: tissue: Lung; age: 52
lung cancer (case)
sample_accession: GSM4159512 sample_title: RNA-seq_LADC34 source_name: LUAD characteristics: tissue: Lung; age: 62
Included in derived sample grouping as lung cancer
sample_accession: GSM4159512 sample_title: RNA-seq_LADC34 source_name: LUAD characteristics: tissue: Lung; age: 62
lung cancer (case)
sample_accession: GSM4159513 sample_title: RNA-seq_LADC35 source_name: LUAD characteristics: tissue: Lung; age: 43
Included in derived sample grouping as lung cancer
sample_accession: GSM4159513 sample_title: RNA-seq_LADC35 source_name: LUAD characteristics: tissue: Lung; age: 43
lung cancer (case)
sample_accession: GSM4159514 sample_title: RNA-seq_LADC37 source_name: LUAD characteristics: tissue: Lung; age: 68
Included in derived sample grouping as lung cancer
sample_accession: GSM4159514 sample_title: RNA-seq_LADC37 source_name: LUAD characteristics: tissue: Lung; age: 68
lung cancer (case)
sample_accession: GSM4159515 sample_title: RNA-seq_LADC38 source_name: LUAD characteristics: tissue: Lung; age: 65
Included in derived sample grouping as lung cancer
sample_accession: GSM4159515 sample_title: RNA-seq_LADC38 source_name: LUAD characteristics: tissue: Lung; age: 65
lung cancer (case)
sample_accession: GSM4159516 sample_title: RNA-seq_LADC39 source_name: LUAD characteristics: tissue: Lung; age: 48
Included in derived sample grouping as lung cancer
sample_accession: GSM4159516 sample_title: RNA-seq_LADC39 source_name: LUAD characteristics: tissue: Lung; age: 48
lung cancer (case)
sample_accession: GSM4159517 sample_title: RNA-seq_LADC40 source_name: LUAD characteristics: tissue: Lung; age: 60
Included in derived sample grouping as lung cancer
sample_accession: GSM4159517 sample_title: RNA-seq_LADC40 source_name: LUAD characteristics: tissue: Lung; age: 60
lung cancer (case)
sample_accession: GSM4159518 sample_title: RNA-seq_LADC41 source_name: LUAD characteristics: tissue: Lung; age: 74
Included in derived sample grouping as lung cancer
sample_accession: GSM4159518 sample_title: RNA-seq_LADC41 source_name: LUAD characteristics: tissue: Lung; age: 74
lung cancer (case)
sample_accession: GSM4159519 sample_title: RNA-seq_LADC42 source_name: LUAD characteristics: tissue: Lung; age: 55
Included in derived sample grouping as lung cancer
sample_accession: GSM4159519 sample_title: RNA-seq_LADC42 source_name: LUAD characteristics: tissue: Lung; age: 55
lung cancer (case)
sample_accession: GSM4159520 sample_title: RNA-seq_LADC43 source_name: LUAD characteristics: tissue: Lung; age: 55
Included in derived sample grouping as lung cancer
sample_accession: GSM4159520 sample_title: RNA-seq_LADC43 source_name: LUAD characteristics: tissue: Lung; age: 55
lung cancer (case)
sample_accession: GSM4159521 sample_title: RNA-seq_LADC44 source_name: LUAD characteristics: tissue: Lung; age: 51
Included in derived sample grouping as lung cancer
sample_accession: GSM4159521 sample_title: RNA-seq_LADC44 source_name: LUAD characteristics: tissue: Lung; age: 51
lung cancer (case)
sample_accession: GSM4159522 sample_title: RNA-seq_LADC45 source_name: LUAD characteristics: tissue: Lung; age: 26
Included in derived sample grouping as lung cancer
sample_accession: GSM4159522 sample_title: RNA-seq_LADC45 source_name: LUAD characteristics: tissue: Lung; age: 26
lung cancer (case)
sample_accession: GSM4159523 sample_title: RNA-seq_LADC46 source_name: LUAD characteristics: tissue: Lung; age: 60
Included in derived sample grouping as lung cancer
sample_accession: GSM4159523 sample_title: RNA-seq_LADC46 source_name: LUAD characteristics: tissue: Lung; age: 60
lung cancer (case)
sample_accession: GSM4159524 sample_title: RNA-seq_LADC47 source_name: LUAD characteristics: tissue: Lung; age: 50
Included in derived sample grouping as lung cancer
sample_accession: GSM4159524 sample_title: RNA-seq_LADC47 source_name: LUAD characteristics: tissue: Lung; age: 50
lung cancer (case)
sample_accession: GSM4159525 sample_title: RNA-seq_LADC48 source_name: LUAD characteristics: tissue: Lung; age: 63
Included in derived sample grouping as lung cancer
sample_accession: GSM4159525 sample_title: RNA-seq_LADC48 source_name: LUAD characteristics: tissue: Lung; age: 63
lung cancer (case)
sample_accession: GSM4159526 sample_title: RNA-seq_LADC49 source_name: LUAD characteristics: tissue: Lung; age: 36
Included in derived sample grouping as lung cancer
sample_accession: GSM4159526 sample_title: RNA-seq_LADC49 source_name: LUAD characteristics: tissue: Lung; age: 36
lung cancer (case)
sample_accession: GSM4159527 sample_title: RNA-seq_LADC50 source_name: LUAD characteristics: tissue: Lung; age: 46
Included in derived sample grouping as lung cancer
sample_accession: GSM4159527 sample_title: RNA-seq_LADC50 source_name: LUAD characteristics: tissue: Lung; age: 46
lung cancer (case)
sample_accession: GSM4159528 sample_title: RNA-seq_LADC51 source_name: LUAD characteristics: tissue: Lung; age: 63
Included in derived sample grouping as lung cancer
sample_accession: GSM4159528 sample_title: RNA-seq_LADC51 source_name: LUAD characteristics: tissue: Lung; age: 63
lung cancer (case)
sample_accession: GSM4159529 sample_title: RNA-seq_LADC52 source_name: LUAD characteristics: tissue: Lung; age: 67
Included in derived sample grouping as lung cancer
sample_accession: GSM4159529 sample_title: RNA-seq_LADC52 source_name: LUAD characteristics: tissue: Lung; age: 67
lung cancer (case)
sample_accession: GSM4159530 sample_title: RNA-seq_LADC53 source_name: LUAD characteristics: tissue: Lung; age: 66
Included in derived sample grouping as lung cancer
sample_accession: GSM4159530 sample_title: RNA-seq_LADC53 source_name: LUAD characteristics: tissue: Lung; age: 66
lung cancer (case)
sample_accession: GSM4159531 sample_title: RNA-seq_LADC54 source_name: LUAD characteristics: tissue: Lung; age: 67
Included in derived sample grouping as lung cancer
sample_accession: GSM4159531 sample_title: RNA-seq_LADC54 source_name: LUAD characteristics: tissue: Lung; age: 67
lung cancer (case)
sample_accession: GSM4159532 sample_title: RNA-seq_LADC55 source_name: LUAD characteristics: tissue: Lung; age: 45
Included in derived sample grouping as lung cancer
sample_accession: GSM4159532 sample_title: RNA-seq_LADC55 source_name: LUAD characteristics: tissue: Lung; age: 45
lung cancer (case)
sample_accession: GSM4159533 sample_title: RNA-seq_LADC56 source_name: LUAD characteristics: tissue: Lung; age: 59
Included in derived sample grouping as lung cancer
sample_accession: GSM4159533 sample_title: RNA-seq_LADC56 source_name: LUAD characteristics: tissue: Lung; age: 59
lung cancer (case)
sample_accession: GSM4159534 sample_title: RNA-seq_LADC57 source_name: LUAD characteristics: tissue: Lung; age: 61
Included in derived sample grouping as lung cancer
sample_accession: GSM4159534 sample_title: RNA-seq_LADC57 source_name: LUAD characteristics: tissue: Lung; age: 61
lung cancer (case)
sample_accession: GSM4159535 sample_title: RNA-seq_LADC58 source_name: LUAD characteristics: tissue: Lung; age: 63
Included in derived sample grouping as lung cancer
sample_accession: GSM4159535 sample_title: RNA-seq_LADC58 source_name: LUAD characteristics: tissue: Lung; age: 63
lung cancer (case)
sample_accession: GSM4159536 sample_title: RNA-seq_LADC60 source_name: LUAD characteristics: tissue: Lung; age: 72
Included in derived sample grouping as lung cancer
sample_accession: GSM4159536 sample_title: RNA-seq_LADC60 source_name: LUAD characteristics: tissue: Lung; age: 72
lung cancer (case)
sample_accession: GSM4159537 sample_title: RNA-seq_LADC61 source_name: LUAD characteristics: tissue: Lung; age: 52
Included in derived sample grouping as lung cancer
sample_accession: GSM4159537 sample_title: RNA-seq_LADC61 source_name: LUAD characteristics: tissue: Lung; age: 52
lung cancer (case)
sample_accession: GSM4159538 sample_title: RNA-seq_LADC63 source_name: LUAD characteristics: tissue: Lung; age: 74
Included in derived sample grouping as lung cancer
sample_accession: GSM4159538 sample_title: RNA-seq_LADC63 source_name: LUAD characteristics: tissue: Lung; age: 74
lung cancer (case)
sample_accession: GSM4159539 sample_title: RNA-seq_LADC66 source_name: LUAD characteristics: tissue: Lung; age: 61
Included in derived sample grouping as lung cancer
sample_accession: GSM4159539 sample_title: RNA-seq_LADC66 source_name: LUAD characteristics: tissue: Lung; age: 61
lung cancer (case)
sample_accession: GSM4159540 sample_title: RNA-seq_LADC67 source_name: LUAD characteristics: tissue: Lung; age: 50
Included in derived sample grouping as lung cancer
sample_accession: GSM4159540 sample_title: RNA-seq_LADC67 source_name: LUAD characteristics: tissue: Lung; age: 50
lung cancer (case)
sample_accession: GSM4159541 sample_title: RNA-seq_LADC68 source_name: LUAD characteristics: tissue: Lung; age: 59
Included in derived sample grouping as lung cancer
sample_accession: GSM4159541 sample_title: RNA-seq_LADC68 source_name: LUAD characteristics: tissue: Lung; age: 59
lung cancer (case)
sample_accession: GSM4159542 sample_title: RNA-seq_LADC71 source_name: LUAD characteristics: tissue: Lung; age: 73
Included in derived sample grouping as lung cancer
sample_accession: GSM4159542 sample_title: RNA-seq_LADC71 source_name: LUAD characteristics: tissue: Lung; age: 73
lung cancer (case)
sample_accession: GSM4159543 sample_title: RNA-seq_LADC72 source_name: LUAD characteristics: tissue: Lung; age: 69
Included in derived sample grouping as lung cancer
sample_accession: GSM4159543 sample_title: RNA-seq_LADC72 source_name: LUAD characteristics: tissue: Lung; age: 69
lung cancer (case)
sample_accession: GSM4159544 sample_title: RNA-seq_LADC73 source_name: LUAD characteristics: tissue: Lung; age: 55
Included in derived sample grouping as lung cancer
sample_accession: GSM4159544 sample_title: RNA-seq_LADC73 source_name: LUAD characteristics: tissue: Lung; age: 55
lung cancer (case)
sample_accession: GSM4159545 sample_title: RNA-seq_LADC74 source_name: LUAD characteristics: tissue: Lung; age: 44
Included in derived sample grouping as lung cancer
sample_accession: GSM4159545 sample_title: RNA-seq_LADC74 source_name: LUAD characteristics: tissue: Lung; age: 44
lung cancer (case)
sample_accession: GSM4159546 sample_title: RNA-seq_LADC89 source_name: LUAD characteristics: tissue: Lung; age: 52
Included in derived sample grouping as lung cancer
sample_accession: GSM4159546 sample_title: RNA-seq_LADC89 source_name: LUAD characteristics: tissue: Lung; age: 52
lung cancer (case)
sample_accession: GSM4159547 sample_title: RNA-seq_LADC90 source_name: LUAD characteristics: tissue: Lung; age: 76
Included in derived sample grouping as lung cancer
sample_accession: GSM4159547 sample_title: RNA-seq_LADC90 source_name: LUAD characteristics: tissue: Lung; age: 76
lung cancer (case)
sample_accession: GSM4159548 sample_title: RNA-seq_LADC91 source_name: LUAD characteristics: tissue: Lung; age: 51
Included in derived sample grouping as lung cancer
sample_accession: GSM4159548 sample_title: RNA-seq_LADC91 source_name: LUAD characteristics: tissue: Lung; age: 51
normal tissue (control)
sample_accession: GSM4423295 sample_title: RNA-seq_normal_lung17 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 73
Included in derived sample grouping as normal tissue
sample_accession: GSM4423295 sample_title: RNA-seq_normal_lung17 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 73
normal tissue (control)
sample_accession: GSM4423296 sample_title: RNA-seq_normal_lung18 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 55
Included in derived sample grouping as normal tissue
sample_accession: GSM4423296 sample_title: RNA-seq_normal_lung18 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 55
normal tissue (control)
sample_accession: GSM4423297 sample_title: RNA-seq_normal_lung19 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 56
Included in derived sample grouping as normal tissue
sample_accession: GSM4423297 sample_title: RNA-seq_normal_lung19 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 56
normal tissue (control)
sample_accession: GSM4423298 sample_title: RNA-seq_normal_lung20 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 57
Included in derived sample grouping as normal tissue
sample_accession: GSM4423298 sample_title: RNA-seq_normal_lung20 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 57
normal tissue (control)
sample_accession: GSM4423299 sample_title: RNA-seq_normal_lung22 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 42
Included in derived sample grouping as normal tissue
sample_accession: GSM4423299 sample_title: RNA-seq_normal_lung22 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 42
normal tissue (control)
sample_accession: GSM4423300 sample_title: RNA-seq_normal_lung23 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 54
Included in derived sample grouping as normal tissue
sample_accession: GSM4423300 sample_title: RNA-seq_normal_lung23 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 54
normal tissue (control)
sample_accession: GSM4423301 sample_title: RNA-seq_normal_lung24 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 73
Included in derived sample grouping as normal tissue
sample_accession: GSM4423301 sample_title: RNA-seq_normal_lung24 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 73
normal tissue (control)
sample_accession: GSM4423302 sample_title: RNA-seq_normal_lung25 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 61
Included in derived sample grouping as normal tissue
sample_accession: GSM4423302 sample_title: RNA-seq_normal_lung25 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 61
normal tissue (control)
sample_accession: GSM4423303 sample_title: RNA-seq_normal_lung26 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 64
Included in derived sample grouping as normal tissue
sample_accession: GSM4423303 sample_title: RNA-seq_normal_lung26 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 64
normal tissue (control)
sample_accession: GSM4423304 sample_title: RNA-seq_normal_lung27 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 31
Included in derived sample grouping as normal tissue
sample_accession: GSM4423304 sample_title: RNA-seq_normal_lung27 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 31
normal tissue (control)
sample_accession: GSM4423305 sample_title: RNA-seq_normal_lung28 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 61
Included in derived sample grouping as normal tissue
sample_accession: GSM4423305 sample_title: RNA-seq_normal_lung28 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 61
normal tissue (control)
sample_accession: GSM4423306 sample_title: RNA-seq_normal_lung29 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 73
Included in derived sample grouping as normal tissue
sample_accession: GSM4423306 sample_title: RNA-seq_normal_lung29 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 73
normal tissue (control)
sample_accession: GSM4423307 sample_title: RNA-seq_normal_lung30 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 67
Included in derived sample grouping as normal tissue
sample_accession: GSM4423307 sample_title: RNA-seq_normal_lung30 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 67
normal tissue (control)
sample_accession: GSM4423308 sample_title: RNA-seq_normal_lung33 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 52
Included in derived sample grouping as normal tissue
sample_accession: GSM4423308 sample_title: RNA-seq_normal_lung33 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 52
normal tissue (control)
sample_accession: GSM4423309 sample_title: RNA-seq_normal_lung34 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 62
Included in derived sample grouping as normal tissue
sample_accession: GSM4423309 sample_title: RNA-seq_normal_lung34 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 62
normal tissue (control)
sample_accession: GSM4423310 sample_title: RNA-seq_normal_lung35 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 43
Included in derived sample grouping as normal tissue
sample_accession: GSM4423310 sample_title: RNA-seq_normal_lung35 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 43
normal tissue (control)
sample_accession: GSM4423311 sample_title: RNA-seq_normal_lung37 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 68
Included in derived sample grouping as normal tissue
sample_accession: GSM4423311 sample_title: RNA-seq_normal_lung37 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 68
normal tissue (control)
sample_accession: GSM4423312 sample_title: RNA-seq_normal_lung38 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 65
Included in derived sample grouping as normal tissue
sample_accession: GSM4423312 sample_title: RNA-seq_normal_lung38 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 65
normal tissue (control)
sample_accession: GSM4423313 sample_title: RNA-seq_normal_lung39 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 48
Included in derived sample grouping as normal tissue
sample_accession: GSM4423313 sample_title: RNA-seq_normal_lung39 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 48
normal tissue (control)
sample_accession: GSM4423314 sample_title: RNA-seq_normal_lung40 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 60
Included in derived sample grouping as normal tissue
sample_accession: GSM4423314 sample_title: RNA-seq_normal_lung40 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 60
normal tissue (control)
sample_accession: GSM4423315 sample_title: RNA-seq_normal_lung41 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 74
Included in derived sample grouping as normal tissue
sample_accession: GSM4423315 sample_title: RNA-seq_normal_lung41 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 74
normal tissue (control)
sample_accession: GSM4423316 sample_title: RNA-seq_normal_lung42 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 55
Included in derived sample grouping as normal tissue
sample_accession: GSM4423316 sample_title: RNA-seq_normal_lung42 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 55
normal tissue (control)
sample_accession: GSM4423317 sample_title: RNA-seq_normal_lung44 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 51
Included in derived sample grouping as normal tissue
sample_accession: GSM4423317 sample_title: RNA-seq_normal_lung44 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 51
normal tissue (control)
sample_accession: GSM4423318 sample_title: RNA-seq_normal_lung45 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 26
Included in derived sample grouping as normal tissue
sample_accession: GSM4423318 sample_title: RNA-seq_normal_lung45 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 26
normal tissue (control)
sample_accession: GSM4423319 sample_title: RNA-seq_normal_lung46 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 60
Included in derived sample grouping as normal tissue
sample_accession: GSM4423319 sample_title: RNA-seq_normal_lung46 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 60
normal tissue (control)
sample_accession: GSM4423320 sample_title: RNA-seq_normal_lung47 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 50
Included in derived sample grouping as normal tissue
sample_accession: GSM4423320 sample_title: RNA-seq_normal_lung47 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 50
normal tissue (control)
sample_accession: GSM4423321 sample_title: RNA-seq_normal_lung48 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 63
Included in derived sample grouping as normal tissue
sample_accession: GSM4423321 sample_title: RNA-seq_normal_lung48 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 63
normal tissue (control)
sample_accession: GSM4423322 sample_title: RNA-seq_normal_lung49 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 36
Included in derived sample grouping as normal tissue
sample_accession: GSM4423322 sample_title: RNA-seq_normal_lung49 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 36
normal tissue (control)
sample_accession: GSM4423323 sample_title: RNA-seq_normal_lung50 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 46
Included in derived sample grouping as normal tissue
sample_accession: GSM4423323 sample_title: RNA-seq_normal_lung50 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 46
normal tissue (control)
sample_accession: GSM4423324 sample_title: RNA-seq_normal_lung51 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 63
Included in derived sample grouping as normal tissue
sample_accession: GSM4423324 sample_title: RNA-seq_normal_lung51 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 63
normal tissue (control)
sample_accession: GSM4423325 sample_title: RNA-seq_normal_lung52 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 67
Included in derived sample grouping as normal tissue
sample_accession: GSM4423325 sample_title: RNA-seq_normal_lung52 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 67
normal tissue (control)
sample_accession: GSM4423326 sample_title: RNA-seq_normal_lung53 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 66
Included in derived sample grouping as normal tissue
sample_accession: GSM4423326 sample_title: RNA-seq_normal_lung53 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 66
normal tissue (control)
sample_accession: GSM4423327 sample_title: RNA-seq_normal_lung54 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 67
Included in derived sample grouping as normal tissue
sample_accession: GSM4423327 sample_title: RNA-seq_normal_lung54 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 67
normal tissue (control)
sample_accession: GSM4423328 sample_title: RNA-seq_normal_lung55 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 45
Included in derived sample grouping as normal tissue
sample_accession: GSM4423328 sample_title: RNA-seq_normal_lung55 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 45
normal tissue (control)
sample_accession: GSM4423329 sample_title: RNA-seq_normal_lung56 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 59
Included in derived sample grouping as normal tissue
sample_accession: GSM4423329 sample_title: RNA-seq_normal_lung56 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 59
normal tissue (control)
sample_accession: GSM4423330 sample_title: RNA-seq_normal_lung57 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 61
Included in derived sample grouping as normal tissue
sample_accession: GSM4423330 sample_title: RNA-seq_normal_lung57 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 61
normal tissue (control)
sample_accession: GSM4423332 sample_title: RNA-seq_normal_lung60 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 72
Included in derived sample grouping as normal tissue
sample_accession: GSM4423332 sample_title: RNA-seq_normal_lung60 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 72
normal tissue (control)
sample_accession: GSM4423333 sample_title: RNA-seq_normal_lung61 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 52
Included in derived sample grouping as normal tissue
sample_accession: GSM4423333 sample_title: RNA-seq_normal_lung61 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 52
normal tissue (control)
sample_accession: GSM4423334 sample_title: RNA-seq_normal_lung63 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 74
Included in derived sample grouping as normal tissue
sample_accession: GSM4423334 sample_title: RNA-seq_normal_lung63 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 74
normal tissue (control)
sample_accession: GSM4423335 sample_title: RNA-seq_normal_lung66 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 61
Included in derived sample grouping as normal tissue
sample_accession: GSM4423335 sample_title: RNA-seq_normal_lung66 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 61
normal tissue (control)
sample_accession: GSM4423336 sample_title: RNA-seq_normal_lung67 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 50
Included in derived sample grouping as normal tissue
sample_accession: GSM4423336 sample_title: RNA-seq_normal_lung67 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 50
normal tissue (control)
sample_accession: GSM4423337 sample_title: RNA-seq_normal_lung68 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 59
Included in derived sample grouping as normal tissue
sample_accession: GSM4423337 sample_title: RNA-seq_normal_lung68 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 59
normal tissue (control)
sample_accession: GSM4423338 sample_title: RNA-seq_normal_lung71 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 73
Included in derived sample grouping as normal tissue
sample_accession: GSM4423338 sample_title: RNA-seq_normal_lung71 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 73
normal tissue (control)
sample_accession: GSM4423339 sample_title: RNA-seq_normal_lung72 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 69
Included in derived sample grouping as normal tissue
sample_accession: GSM4423339 sample_title: RNA-seq_normal_lung72 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 69
normal tissue (control)
sample_accession: GSM4423340 sample_title: RNA-seq_normal_lung73 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 55
Included in derived sample grouping as normal tissue
sample_accession: GSM4423340 sample_title: RNA-seq_normal_lung73 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 55
normal tissue (control)
sample_accession: GSM4423341 sample_title: RNA-seq_normal_lung74 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 44
Included in derived sample grouping as normal tissue
sample_accession: GSM4423341 sample_title: RNA-seq_normal_lung74 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 44
normal tissue (control)
sample_accession: GSM4423342 sample_title: RNA-seq_normal_lung89 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 52
Included in derived sample grouping as normal tissue
sample_accession: GSM4423342 sample_title: RNA-seq_normal_lung89 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 52
normal tissue (control)
sample_accession: GSM4423343 sample_title: RNA-seq_normal_lung90 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 76
Included in derived sample grouping as normal tissue
sample_accession: GSM4423343 sample_title: RNA-seq_normal_lung90 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 76
normal tissue (control)
sample_accession: GSM4423344 sample_title: RNA-seq_normal_lung91 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 51
Included in derived sample grouping as normal tissue
sample_accession: GSM4423344 sample_title: RNA-seq_normal_lung91 source_name: Clinical normal lung tissue characteristics: tissue: Lung; disease state: normal tissue; age: 51
Original dataset metadata, sample metadata, source links, and GEO data availability flags.
Planned trusted source for processed count availability.
Planned source for curated expression experiment links.
Publication context when PubMed identifiers are already known.
No project feedback stored for this dataset.
dataset_accession: GSE140343 dataset_title: Gene expression profile of clinical LUAD tumors and their paired non-cancerous adjacent tissues by RNA-seq analysis organism: Homo sapiens assay_type: bulk RNA-seq processed_data_available: true raw_data_available: true submission_date: 2019-11-13 last_update_date: 2020-10-09 organization_name: Shanghai Institute of Materia Medica department: Not available public_date: 2020-07-10 experiment_types: Expression profiling by high throughput sequencing platforms: GPL20795 HiSeq X Ten (Homo sapiens) sub_series: Not available bioproject: PRJNA589320 supplementary_files: TAR: GSE140343_RAW.tar series_type: Series
No warnings
Samples currently treated as the comparison case group.
1 more samples are hidden from this preview.
Samples currently treated as controls or baseline.
Samples with no explicit case or control marker.
No samples
Samples excluded from grouping by hard exclusion rules.
No samples
Samples that need manual review before trusting grouping.
No samples
No review decisions have been stored for this dataset.