Siftome Phase 3L

GSE165595

Genome-wide perturbations of Alu expression and Alu-associated post-transcriptional regulations find a uniqueness in oligodendroglioma

Not suitable Dataset does not meet the current suitability threshold.
Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset
Source
GEO
Search intent
Patient tissue tumor-vs-normal
Intent behavior
search-intent-behavior-v1
Submission date
2021-01-26
Last update
2022-01-19
Organization
Seoul National University College of Medicine
Department
Department of Neurosurgery
Public date
2021-01-27
Experiment types
Expression profiling by high throughput sequencing
Platforms
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Series type
Series
SubSeries
Not available
BioProject
PRJNA695017
Supplementary files
CSV: GSE165595_tpm.csv.gz
Organism
Homo sapiens
Assay
bulk RNA-seq
Samples
82
Study design
Tumor vs unmatched normal
Specimen/source
Tissue
Scoring version
intent-aware-scoring-v15
Ranking batch
b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created
2026-06-05T20:20:27.088676Z
Warning version
intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism
Homo sapiens
Assay
bulk RNA-seq
Specimen/source
patient tissue or biopsy
Controls
matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters
Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules
missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps
non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts
microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs unmatched normal Tissue

Analysis Readiness

Ready after review
94% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

7/10 pts

Metadata quality is usable, but still deserves review.

Blockers

No readiness blockers detected.

Next Steps

  • Review the sample grouping CSV and contrast CSV before running differential expression.
  • Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

No expert-review triggers were detected by Siftome.

Why This Is Ranked Here

Patient tissue tumor-vs-normal
Not suitable Dataset does not meet the current suitability threshold.

Score Components

  • relevance 50% Organism normalized. Assay type normalized.
  • comparison suitability 0% Tumor and normal sample groups detected. No excluded sample type flags detected. Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
  • metadata quality 70% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata was not normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
  • data availability 100% Processed data available. Raw data available.
  • overall 34% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Derived Classifications

  • Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
  • Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
  • Study design Tumor vs unmatched normal Study design remains rule-derived: Tumor vs unmatched normal.
  • Specimen/source Tissue Specimen/source remains rule-derived: Tissue.
  • Likely case group tumor sample 41 samples
  • Likely control group normal tissue 41 samples

Warnings

  • DISEASE_LABEL_UNCLEAR warning Disease or condition label could not be normalized.
  • TISSUE_TYPE_MISSING warning Tissue or cell type could not be normalized.

Intent Interpretation

  • Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
  • Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
  • Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
  • Specimen assumption patient tissue or biopsy Derived specimen/source is Tissue.
  • Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs unmatched normal; likely groups are tumor sample vs normal tissue.
  • Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
  • Warning rules 2 active warnings missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
  • Downgrade or exclusion reason Downgraded disease context: not a colorectal/GI cancer cohort. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

  • Recommendation Not suitable Dataset does not meet the current suitability threshold.
  • Supporting fact Tumor vs unmatched normal · Tissue · suitability 0%. Contributed to match or upgrade evidence.
  • Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
  • Supporting fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to match or upgrade evidence.
  • Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
  • Supporting fact 2 warnings require review. Contributed to match or upgrade evidence.
  • Caution fact Disease or condition label could not be normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Tissue or cell type could not be normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Tissue clarity: Tissue metadata was not normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
  • Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
  • Caution fact Overall score capped because tumor/normal grouping is from a non-colorectal cancer context. Contributed to downgrade or manual-review evidence.
  • Caution fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to downgrade or manual-review evidence.
  • Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession
GSE165595
Sample records
82 GSM samples
  • GEO has priority for original metadata under the Phase 3J source rules.
  • Processed data: available.
  • Raw data: available.
  • No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession
GSE165595
  • No recount3 project identifier has been imported for this dataset.
  • Once imported, recount3 has priority for processed count availability.
  • The recount3 source filter excludes this dataset until that linkage exists.
No recount3 sync data available.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession
GSE165595
  • No Expression Atlas experiment identifier has been imported for this dataset.
  • Once imported, Expression Atlas has priority for curated expression experiment links.
  • The Expression Atlas source filter excludes this dataset until that linkage exists.
No Expression Atlas sync data available.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession
GSE165595
  • No PubMed identifier is present in the current runtime metadata.
  • No live PubMed search is performed from the dataset detail page.
No publication identifier imported.

Dataset Feedback

0 stored

Original GEO Metadata

dataset_accession: GSE165595
dataset_title: Genome-wide perturbations of Alu expression and Alu-associated post-transcriptional regulations find a uniqueness in oligodendroglioma
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2021-01-26
last_update_date: 2022-01-19
organization_name: Seoul National University College of Medicine
department: Department of Neurosurgery
public_date: 2021-01-27
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL20301 Illumina HiSeq 4000 (Homo sapiens)
sub_series: Not available
bioproject: PRJNA695017
supplementary_files: CSV: GSE165595_tpm.csv.gz
series_type: Series

Why It Matched

  • Tumor vs unmatched normal · Tissue · suitability 0%.
  • Prioritized assay: bulk RNA-seq is the active assay expectation.
  • Downgraded disease context: not a colorectal/GI cancer cohort.
  • Processed data is available for downstream review.
  • 2 warnings require review.

Why It May Not Be Suitable

  • Disease or condition label could not be normalized.
  • Tissue or cell type could not be normalized.
  • Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
  • Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized.
  • Missing or unclear metadata: Tissue clarity: Tissue metadata was not normalized.
  • Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.
  • Downgraded disease context: not a colorectal/GI cancer cohort.
  • Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

  • warning DISEASE_LABEL_UNCLEAR Disease or condition label could not be normalized.
  • warning TISSUE_TYPE_MISSING Tissue or cell type could not be normalized.

Normalized Fields

125 fields
Field Value Source Origin Confidence Evidence Reason
assay_type bulk RNA-seq dataset GSE165595 Runtime Siftome inference GEO:dataset:GSE165595:b74c3731b83146dec5c055fe9251775127e8a6b18b4a0da9a3894379f76c878c high confidence bulk rna-seq dataset_accession: GSE165595 dataset_title: Genome-wide perturbations of Alu expression and Alu-associated post-transcriptional regulations find a uniqueness in oligodendrogliom... keyword match keyword match: bulk rna-seq
organism Homo sapiens dataset GSE165595 Runtime Siftome inference GEO:dataset:GSE165595:b74c3731b83146dec5c055fe9251775127e8a6b18b4a0da9a3894379f76c878c high confidence homo sapiens dataset_accession: GSE165595 dataset_title: Genome-wide perturbations of Alu expression and Alu-associated post-transcriptional regulations find a uniqueness in oligodendrogliom... keyword match keyword match: homo sapiens
sample_type normal tissue sample GSM5044697 Runtime Siftome inference GEO:sample:GSM5044697:fb27e4b572b4d8c593b7fa2b2b080fed9ed4c3b298892998569dc9a16d22c958 low confidence normal sample_accession: GSM5044697 sample_title: N35 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_1; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044697 Runtime Siftome inference GEO:sample:GSM5044697:fb27e4b572b4d8c593b7fa2b2b080fed9ed4c3b298892998569dc9a16d22c958 low confidence tumor sample_accession: GSM5044697 sample_title: N35 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_1; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044698 Runtime Siftome inference GEO:sample:GSM5044698:206dff20574c3c16d64917d65a7e601718ffe0802568eb570ee791ab1c4adfb0 low confidence tumor sample_accession: GSM5044698 sample_title: T35 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_1; pathology: oligodendrogli... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044699 Runtime Siftome inference GEO:sample:GSM5044699:d569ee92871f1cd53799490e39bc09987e4fc6636ae90424cdb3ba8cfc18b9f9 low confidence normal sample_accession: GSM5044699 sample_title: N37 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_2; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044699 Runtime Siftome inference GEO:sample:GSM5044699:d569ee92871f1cd53799490e39bc09987e4fc6636ae90424cdb3ba8cfc18b9f9 low confidence tumor sample_accession: GSM5044699 sample_title: N37 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_2; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044700 Runtime Siftome inference GEO:sample:GSM5044700:2746870c7d4848bf88fad5fbf3e03a219d65f2f9cf623e09360c451b8fe7bd4e low confidence tumor sample_accession: GSM5044700 sample_title: T37 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_2; pathology: oligodendrogli... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044701 Runtime Siftome inference GEO:sample:GSM5044701:3d5d997de88da1697622f206316eb636f681927f48829244c3626d441a2673d7 low confidence normal sample_accession: GSM5044701 sample_title: N38 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_3; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044701 Runtime Siftome inference GEO:sample:GSM5044701:3d5d997de88da1697622f206316eb636f681927f48829244c3626d441a2673d7 low confidence tumor sample_accession: GSM5044701 sample_title: N38 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_3; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044702 Runtime Siftome inference GEO:sample:GSM5044702:343482ec06563bfeee6d88dd9c084a6a20e64876f6841915df45f48636861c79 low confidence tumor sample_accession: GSM5044702 sample_title: T38 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_3; pathology: oligodendrogli... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044703 Runtime Siftome inference GEO:sample:GSM5044703:6dda295098699b3770ffd99cccac7eaa1dfa8cbb59accb082bd1bb0efa91177e low confidence normal sample_accession: GSM5044703 sample_title: N54 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_44; pathology: oligodendrog... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044703 Runtime Siftome inference GEO:sample:GSM5044703:6dda295098699b3770ffd99cccac7eaa1dfa8cbb59accb082bd1bb0efa91177e low confidence tumor sample_accession: GSM5044703 sample_title: N54 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_44; pathology: oligodendrog... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044704 Runtime Siftome inference GEO:sample:GSM5044704:cba99a3e94669984ed73ab52c6642209e76a2c460de74736582ab27ea5ddc52d low confidence tumor sample_accession: GSM5044704 sample_title: T54 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_44; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044705 Runtime Siftome inference GEO:sample:GSM5044705:21d9cec7d43a0cea77552cf63d6ead2a7142bd791fb93b1561c92f64400e64ce low confidence normal sample_accession: GSM5044705 sample_title: N55-2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_45; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044705 Runtime Siftome inference GEO:sample:GSM5044705:21d9cec7d43a0cea77552cf63d6ead2a7142bd791fb93b1561c92f64400e64ce low confidence tumor sample_accession: GSM5044705 sample_title: N55-2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_45; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044706 Runtime Siftome inference GEO:sample:GSM5044706:2bf3699af2d7fec56d17ee9881f33edd80fd033e1f20893868cd547ae1c516a6 low confidence tumor sample_accession: GSM5044706 sample_title: T55 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_45; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044707 Runtime Siftome inference GEO:sample:GSM5044707:052454ab13b2337e7b8a9482abf52ff71b326cb5ac4cacd4fd18ed1eea507137 low confidence normal sample_accession: GSM5044707 sample_title: N48-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_46; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044707 Runtime Siftome inference GEO:sample:GSM5044707:052454ab13b2337e7b8a9482abf52ff71b326cb5ac4cacd4fd18ed1eea507137 low confidence tumor sample_accession: GSM5044707 sample_title: N48-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_46; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044708 Runtime Siftome inference GEO:sample:GSM5044708:6ceffe6160cc43a05b7ad9691f8db9a9095af60384d449168cc5d7e5a09670e5 low confidence tumor sample_accession: GSM5044708 sample_title: T56 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_46; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044709 Runtime Siftome inference GEO:sample:GSM5044709:ee35ba766e6247e6c5b57bbd3e895d49c9657c1936ebaabe331f12bface9f396 low confidence normal sample_accession: GSM5044709 sample_title: N43-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_35; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044709 Runtime Siftome inference GEO:sample:GSM5044709:ee35ba766e6247e6c5b57bbd3e895d49c9657c1936ebaabe331f12bface9f396 low confidence tumor sample_accession: GSM5044709 sample_title: N43-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_35; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044710 Runtime Siftome inference GEO:sample:GSM5044710:130262b27dcdb356bf8538f7a0399d0df3781c6b46c6e387dbd846b4069e471a low confidence tumor sample_accession: GSM5044710 sample_title: T43-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_35; pathology: oligodendro... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044711 Runtime Siftome inference GEO:sample:GSM5044711:85ffe61d599d552adff44138d7063a33749ad3b107312d49b81e2621618b9cb2 low confidence normal sample_accession: GSM5044711 sample_title: N44 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_36; pathology: oligodendrog... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044711 Runtime Siftome inference GEO:sample:GSM5044711:85ffe61d599d552adff44138d7063a33749ad3b107312d49b81e2621618b9cb2 low confidence tumor sample_accession: GSM5044711 sample_title: N44 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_36; pathology: oligodendrog... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044712 Runtime Siftome inference GEO:sample:GSM5044712:b4ad7825978acd6de4d503531288ddb7b3f1129a50cc5a4116e410150bed3bb9 low confidence tumor sample_accession: GSM5044712 sample_title: T44 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_36; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044713 Runtime Siftome inference GEO:sample:GSM5044713:a981e370a7536187cc5f0dbcdc2272f77f141063ce1bfb86a855e97a7123b969 low confidence normal sample_accession: GSM5044713 sample_title: N45-2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_37; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044713 Runtime Siftome inference GEO:sample:GSM5044713:a981e370a7536187cc5f0dbcdc2272f77f141063ce1bfb86a855e97a7123b969 low confidence tumor sample_accession: GSM5044713 sample_title: N45-2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_37; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044714 Runtime Siftome inference GEO:sample:GSM5044714:d0ef716595c7812bcf941d4bb309fc2930a760ed3a49811019e4023ec42f0e7d low confidence tumor sample_accession: GSM5044714 sample_title: T45 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_37; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044715 Runtime Siftome inference GEO:sample:GSM5044715:26beaab5f9b38903b50bf252eaf28875f28928d3eb16d229546930d74d52738e low confidence normal sample_accession: GSM5044715 sample_title: N46-2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_38; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044715 Runtime Siftome inference GEO:sample:GSM5044715:26beaab5f9b38903b50bf252eaf28875f28928d3eb16d229546930d74d52738e low confidence tumor sample_accession: GSM5044715 sample_title: N46-2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_38; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044716 Runtime Siftome inference GEO:sample:GSM5044716:aae3b14aa90d05477eb2c640941ceb08d0063d376a3853e67ff4ab3cbbb4a775 low confidence tumor sample_accession: GSM5044716 sample_title: T46 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_38; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044717 Runtime Siftome inference GEO:sample:GSM5044717:ce633ccead6d0b5153cb324748d23b8ecc9a99f837ff11bcec8b56837c382732 low confidence normal sample_accession: GSM5044717 sample_title: N47-2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_39; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044717 Runtime Siftome inference GEO:sample:GSM5044717:ce633ccead6d0b5153cb324748d23b8ecc9a99f837ff11bcec8b56837c382732 low confidence tumor sample_accession: GSM5044717 sample_title: N47-2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_39; pathology: oligodendr... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044718 Runtime Siftome inference GEO:sample:GSM5044718:6c40e835706983563ad6025c17a80b2be6a191d4a503d2ab9995511ce97d6952 low confidence tumor sample_accession: GSM5044718 sample_title: T47 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_39; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044719 Runtime Siftome inference GEO:sample:GSM5044719:380e7a3c1edf700d4338411e97fb50eea4504395706b81dd2d97614ac026dcf4 low confidence normal sample_accession: GSM5044719 sample_title: N31 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_4; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044719 Runtime Siftome inference GEO:sample:GSM5044719:380e7a3c1edf700d4338411e97fb50eea4504395706b81dd2d97614ac026dcf4 low confidence tumor sample_accession: GSM5044719 sample_title: N31 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_4; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044720 Runtime Siftome inference GEO:sample:GSM5044720:e470f23d8a37a22489c747b8aa98e7aeacd432c07b53c95d7f21b828961221aa low confidence tumor sample_accession: GSM5044720 sample_title: T31 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_4; pathology: oligodendrogli... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044721 Runtime Siftome inference GEO:sample:GSM5044721:3660bfc621042f31385b17f24ebd5687ce88d1a364bce4842c739940c2af4d3e low confidence normal sample_accession: GSM5044721 sample_title: N49 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_41; pathology: oligodendrog... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044721 Runtime Siftome inference GEO:sample:GSM5044721:3660bfc621042f31385b17f24ebd5687ce88d1a364bce4842c739940c2af4d3e low confidence tumor sample_accession: GSM5044721 sample_title: N49 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_41; pathology: oligodendrog... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044722 Runtime Siftome inference GEO:sample:GSM5044722:fbaf867c0c427bce40169ded6d964582e213e04a4690fc21462a3a17fafbca7e low confidence tumor sample_accession: GSM5044722 sample_title: T49 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_41; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044723 Runtime Siftome inference GEO:sample:GSM5044723:90efff99dd1fd62bafbc50d0d61c5acea88234561c6772efbb0c0296144953b4 low confidence normal sample_accession: GSM5044723 sample_title: N32 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_5; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044723 Runtime Siftome inference GEO:sample:GSM5044723:90efff99dd1fd62bafbc50d0d61c5acea88234561c6772efbb0c0296144953b4 low confidence tumor sample_accession: GSM5044723 sample_title: N32 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_5; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044724 Runtime Siftome inference GEO:sample:GSM5044724:338072e982045d419cdfd61c284865bf48723656342f21aefd72fd71936f3606 low confidence tumor sample_accession: GSM5044724 sample_title: T32 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_5; pathology: oligodendrogli... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044725 Runtime Siftome inference GEO:sample:GSM5044725:216f2f64a565f555b89c498030a5e0a53c666d49aa9b0ec7b63833c4ce87227d low confidence normal sample_accession: GSM5044725 sample_title: N33 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_6; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044725 Runtime Siftome inference GEO:sample:GSM5044725:216f2f64a565f555b89c498030a5e0a53c666d49aa9b0ec7b63833c4ce87227d low confidence tumor sample_accession: GSM5044725 sample_title: N33 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_6; pathology: oligodendrogl... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044726 Runtime Siftome inference GEO:sample:GSM5044726:c6b786515cfd49b91dc177212418d2c54c41880b0293318ed34c7c17b15e776d low confidence tumor sample_accession: GSM5044726 sample_title: T33 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_6; pathology: oligodendrogli... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044727 Runtime Siftome inference GEO:sample:GSM5044727:a438d7b701b78c605a28f546617041df56300aec58fe7eaabf0b989694388b37 low confidence normal sample_accession: GSM5044727 sample_title: N51-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_42; pathology: IDH mutant... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044727 Runtime Siftome inference GEO:sample:GSM5044727:a438d7b701b78c605a28f546617041df56300aec58fe7eaabf0b989694388b37 low confidence tumor sample_accession: GSM5044727 sample_title: N51-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_42; pathology: IDH mutant... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044728 Runtime Siftome inference GEO:sample:GSM5044728:ee3260281f921de036462fdafa670fd30660aeff0b305090c352f33718e62e36 low confidence tumor sample_accession: GSM5044728 sample_title: T51 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_42; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044729 Runtime Siftome inference GEO:sample:GSM5044729:edd158690c7d2c95ae540e874e09f046bc2b0d6667119d3a62b657aa30a20ead low confidence normal sample_accession: GSM5044729 sample_title: N52 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_43; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044729 Runtime Siftome inference GEO:sample:GSM5044729:edd158690c7d2c95ae540e874e09f046bc2b0d6667119d3a62b657aa30a20ead low confidence tumor sample_accession: GSM5044729 sample_title: N52 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_43; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044730 Runtime Siftome inference GEO:sample:GSM5044730:c80986a7733dda82d76f5a2dc1b41e2e6cb36c91599f201f4f2212ae2c04f98b low confidence tumor sample_accession: GSM5044730 sample_title: T52 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_43; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044731 Runtime Siftome inference GEO:sample:GSM5044731:d86fe3cb0f682ce85d2a7a8dd84b4d92b173307324ad1342d4d72073e18d320a low confidence normal sample_accession: GSM5044731 sample_title: N1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_7; pathology: IDH mutant ast... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044731 Runtime Siftome inference GEO:sample:GSM5044731:d86fe3cb0f682ce85d2a7a8dd84b4d92b173307324ad1342d4d72073e18d320a low confidence tumor sample_accession: GSM5044731 sample_title: N1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_7; pathology: IDH mutant ast... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044732 Runtime Siftome inference GEO:sample:GSM5044732:e9582acac2c304e991349000def03800bb95c7b4e229c0671db4adb1b4330e9d low confidence tumor sample_accession: GSM5044732 sample_title: T1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_7; pathology: IDH mutant astr... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044733 Runtime Siftome inference GEO:sample:GSM5044733:c8215927071706a062da5e3e7e7a5bd81f284834e3c91c021cd3dc3b6bf82ec0 low confidence normal sample_accession: GSM5044733 sample_title: N2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_8; pathology: IDH mutant ast... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044733 Runtime Siftome inference GEO:sample:GSM5044733:c8215927071706a062da5e3e7e7a5bd81f284834e3c91c021cd3dc3b6bf82ec0 low confidence tumor sample_accession: GSM5044733 sample_title: N2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_8; pathology: IDH mutant ast... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044734 Runtime Siftome inference GEO:sample:GSM5044734:2e08bfee9cfad578965ddc98a4a986b61a61321c64c6dc30d183211f0df00513 low confidence tumor sample_accession: GSM5044734 sample_title: T2 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_8; pathology: IDH mutant astr... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044735 Runtime Siftome inference GEO:sample:GSM5044735:d7dff9cfef43e88dd3982545872197ae654b40490b84967f7c1c7a499d0bf22e low confidence normal sample_accession: GSM5044735 sample_title: N7 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_11; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044735 Runtime Siftome inference GEO:sample:GSM5044735:d7dff9cfef43e88dd3982545872197ae654b40490b84967f7c1c7a499d0bf22e low confidence tumor sample_accession: GSM5044735 sample_title: N7 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_11; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044736 Runtime Siftome inference GEO:sample:GSM5044736:6c16b2d5ef9a408b3a6f811fae95752738958daca7181b01d1845ff3352c8b7f low confidence tumor sample_accession: GSM5044736 sample_title: T7 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_11; pathology: IDH mutant ast... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044737 Runtime Siftome inference GEO:sample:GSM5044737:9a4db27d3835a7f32991ed835007c1155106860b59bef16ea38960416a73387b low confidence normal sample_accession: GSM5044737 sample_title: N8 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_13; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044737 Runtime Siftome inference GEO:sample:GSM5044737:9a4db27d3835a7f32991ed835007c1155106860b59bef16ea38960416a73387b low confidence tumor sample_accession: GSM5044737 sample_title: N8 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_13; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044738 Runtime Siftome inference GEO:sample:GSM5044738:e1e9b055de743efb77725046c1225feefd4c1f257f7ba742c707bbadd2110a32 low confidence tumor sample_accession: GSM5044738 sample_title: T8 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_13; pathology: IDH mutant ast... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044739 Runtime Siftome inference GEO:sample:GSM5044739:59119318d8d5113e558d3921f68d04726c96c4471eda0f48bf25820dc1e83610 low confidence normal sample_accession: GSM5044739 sample_title: N17 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_19; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044739 Runtime Siftome inference GEO:sample:GSM5044739:59119318d8d5113e558d3921f68d04726c96c4471eda0f48bf25820dc1e83610 low confidence tumor sample_accession: GSM5044739 sample_title: N17 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_19; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044740 Runtime Siftome inference GEO:sample:GSM5044740:1a91ac1bb1d0428330d11a853b08fed8d03f7b176dec3a2f58555e957c494a0a low confidence tumor sample_accession: GSM5044740 sample_title: T17 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_19; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044741 Runtime Siftome inference GEO:sample:GSM5044741:d6ed594a2bad8d862d3e71371fdc498fd1d7bad19041fa7ab03fc7cccb952a27 low confidence normal sample_accession: GSM5044741 sample_title: N39 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_31; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044741 Runtime Siftome inference GEO:sample:GSM5044741:d6ed594a2bad8d862d3e71371fdc498fd1d7bad19041fa7ab03fc7cccb952a27 low confidence tumor sample_accession: GSM5044741 sample_title: N39 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_31; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044742 Runtime Siftome inference GEO:sample:GSM5044742:1dc54919f99602e82d74265225aeff19c7eab8541026ddc93ae7b75b9e2c92a8 low confidence tumor sample_accession: GSM5044742 sample_title: T39 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_31; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044743 Runtime Siftome inference GEO:sample:GSM5044743:47ab987596ab20e36f37deae6c4cf968b021a7c0c87e9792eb1c97ba7b84a007 low confidence normal sample_accession: GSM5044743 sample_title: N41 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_33; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044743 Runtime Siftome inference GEO:sample:GSM5044743:47ab987596ab20e36f37deae6c4cf968b021a7c0c87e9792eb1c97ba7b84a007 low confidence tumor sample_accession: GSM5044743 sample_title: N41 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_33; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044744 Runtime Siftome inference GEO:sample:GSM5044744:5719949a217c30f37ef9d2728a69cb6dafdb75d0bebc2606c8627c8f64c85c05 low confidence tumor sample_accession: GSM5044744 sample_title: T41 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_33; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044745 Runtime Siftome inference GEO:sample:GSM5044745:233449564cf050d77fa183aed439af9516bb806810be68e36a2b8ec3ca5ac44d low confidence normal sample_accession: GSM5044745 sample_title: N26 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_26; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044745 Runtime Siftome inference GEO:sample:GSM5044745:233449564cf050d77fa183aed439af9516bb806810be68e36a2b8ec3ca5ac44d low confidence tumor sample_accession: GSM5044745 sample_title: N26 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_26; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044746 Runtime Siftome inference GEO:sample:GSM5044746:31783e94e50c974f386152ea84130796d79cb089e02248c70538330057ac5f6f low confidence tumor sample_accession: GSM5044746 sample_title: T26 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_26; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044747 Runtime Siftome inference GEO:sample:GSM5044747:9ee66c09b5b782f5b842cf6cbcb7b25874ce9bbc54a2a70bb5d51af136b7e4ef low confidence normal sample_accession: GSM5044747 sample_title: N27 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_27; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044747 Runtime Siftome inference GEO:sample:GSM5044747:9ee66c09b5b782f5b842cf6cbcb7b25874ce9bbc54a2a70bb5d51af136b7e4ef low confidence tumor sample_accession: GSM5044747 sample_title: N27 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_27; pathology: IDH mutant a... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044748 Runtime Siftome inference GEO:sample:GSM5044748:df188913da3f6f18b8addf01db5f3274b4aa07508da781a93c301ff58828423e low confidence tumor sample_accession: GSM5044748 sample_title: T27 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_27; pathology: IDH mutant as... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044749 Runtime Siftome inference GEO:sample:GSM5044749:4c35e337935460602c7684eae36a3daf07835f7ebf3dda8b7eedbb98a38cb3f1 low confidence normal sample_accession: GSM5044749 sample_title: N6 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_10; pathology: Glioblastoma N6 controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044749 Runtime Siftome inference GEO:sample:GSM5044749:4c35e337935460602c7684eae36a3daf07835f7ebf3dda8b7eedbb98a38cb3f1 low confidence tumor sample_accession: GSM5044749 sample_title: N6 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_10; pathology: Glioblastoma N6 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044750 Runtime Siftome inference GEO:sample:GSM5044750:b687639908ccc196b2968ee0002b59cb496539cc5fec8eb7e331f1992652acb5 low confidence tumor sample_accession: GSM5044750 sample_title: T6 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_10; pathology: Glioblastoma T6 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044751 Runtime Siftome inference GEO:sample:GSM5044751:33a2a2c25e03705017427bff7452094c4c90da36f547eef106f4e8a2c3137a2f low confidence normal sample_accession: GSM5044751 sample_title: N12 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_17; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044751 Runtime Siftome inference GEO:sample:GSM5044751:33a2a2c25e03705017427bff7452094c4c90da36f547eef106f4e8a2c3137a2f low confidence tumor sample_accession: GSM5044751 sample_title: N12 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_17; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044752 Runtime Siftome inference GEO:sample:GSM5044752:643ccc57c8cb8077e8f1a3fe5cf7890459892601ed055a8aeba0ba984e0ef2e2 low confidence tumor sample_accession: GSM5044752 sample_title: T12 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_17; pathology: Glioblastoma T12 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044753 Runtime Siftome inference GEO:sample:GSM5044753:751d4269354e8886000efca00665c2422486849f05580c2091e61023880ba3c3 low confidence normal sample_accession: GSM5044753 sample_title: N13 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_18; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044753 Runtime Siftome inference GEO:sample:GSM5044753:751d4269354e8886000efca00665c2422486849f05580c2091e61023880ba3c3 low confidence tumor sample_accession: GSM5044753 sample_title: N13 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_18; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044754 Runtime Siftome inference GEO:sample:GSM5044754:a103b381f278539eb218668126499e8f4e48eaf57dc02d6bfc7f5b6676ea5372 low confidence tumor sample_accession: GSM5044754 sample_title: T13 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_18; pathology: Glioblastoma T13 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044755 Runtime Siftome inference GEO:sample:GSM5044755:71f5930c68dd3b4b78a45c8ba65326c8d6b6acfb80949ebb0386d89c6797a275 low confidence normal sample_accession: GSM5044755 sample_title: N18 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_20; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044755 Runtime Siftome inference GEO:sample:GSM5044755:71f5930c68dd3b4b78a45c8ba65326c8d6b6acfb80949ebb0386d89c6797a275 low confidence tumor sample_accession: GSM5044755 sample_title: N18 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_20; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044756 Runtime Siftome inference GEO:sample:GSM5044756:27fd455c66b4ea80a3b806d561cb25c66372aa83e8676d22b18157e0e9035fe4 low confidence tumor sample_accession: GSM5044756 sample_title: T18 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_20; pathology: Glioblastoma T18 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044757 Runtime Siftome inference GEO:sample:GSM5044757:92bb9c0ba8f6b7d9c162fa47bfee71c727bf5c1bc717ccd48fbbea1c24e85bd3 low confidence normal sample_accession: GSM5044757 sample_title: N19 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_21; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044757 Runtime Siftome inference GEO:sample:GSM5044757:92bb9c0ba8f6b7d9c162fa47bfee71c727bf5c1bc717ccd48fbbea1c24e85bd3 low confidence tumor sample_accession: GSM5044757 sample_title: N19 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_21; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044758 Runtime Siftome inference GEO:sample:GSM5044758:85211de7ed605ea0574de643ada7e2faf862984fce10cb2d6145e3706119f861 low confidence tumor sample_accession: GSM5044758 sample_title: T19 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_21; pathology: Glioblastoma T19 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044759 Runtime Siftome inference GEO:sample:GSM5044759:34c4c86b73532d35e644790d979eabebf632ad68ebce46c85fc1016dbc427456 low confidence normal sample_accession: GSM5044759 sample_title: N20 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_22; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044759 Runtime Siftome inference GEO:sample:GSM5044759:34c4c86b73532d35e644790d979eabebf632ad68ebce46c85fc1016dbc427456 low confidence tumor sample_accession: GSM5044759 sample_title: N20 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_22; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044760 Runtime Siftome inference GEO:sample:GSM5044760:0009e8f2e8ab165f1b5baef1e1f3668ecda9e310bca2c1d836e0c2e38000c00a low confidence tumor sample_accession: GSM5044760 sample_title: T20 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_22; pathology: Glioblastoma T20 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044761 Runtime Siftome inference GEO:sample:GSM5044761:c574a56accc226d4923c0c8444536cc8e3897f6f80d5d835fc72852b8795325e low confidence normal sample_accession: GSM5044761 sample_title: N22 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_23; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044761 Runtime Siftome inference GEO:sample:GSM5044761:c574a56accc226d4923c0c8444536cc8e3897f6f80d5d835fc72852b8795325e low confidence tumor sample_accession: GSM5044761 sample_title: N22 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_23; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044762 Runtime Siftome inference GEO:sample:GSM5044762:3ed82373b1456a579d01f49733783f9d43d04c72aa0515447c64613180bec9ed low confidence tumor sample_accession: GSM5044762 sample_title: T22 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_23; pathology: Glioblastoma T22 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044763 Runtime Siftome inference GEO:sample:GSM5044763:6f765625fef1e2b86414a9f4f5d5f0058f0426af13b527e9eadef44d8967b80d low confidence normal sample_accession: GSM5044763 sample_title: N24 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_24; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044763 Runtime Siftome inference GEO:sample:GSM5044763:6f765625fef1e2b86414a9f4f5d5f0058f0426af13b527e9eadef44d8967b80d low confidence tumor sample_accession: GSM5044763 sample_title: N24 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_24; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044764 Runtime Siftome inference GEO:sample:GSM5044764:a372248b0fe2f8adc412d2e230c3d5b862201e087de7b3ba31f657cdf3bca4b0 low confidence tumor sample_accession: GSM5044764 sample_title: T24 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_24; pathology: Glioblastoma T24 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044765 Runtime Siftome inference GEO:sample:GSM5044765:d0142abeebe016b84c69cc9526d14c85038d9335671fed2c1db837152656feff low confidence normal sample_accession: GSM5044765 sample_title: N25 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_25; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044765 Runtime Siftome inference GEO:sample:GSM5044765:d0142abeebe016b84c69cc9526d14c85038d9335671fed2c1db837152656feff low confidence tumor sample_accession: GSM5044765 sample_title: N25 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_25; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044766 Runtime Siftome inference GEO:sample:GSM5044766:925c047247ed4a5a5be7450dacf28b54f581e2489454b66f8e001a7aa55837c1 low confidence tumor sample_accession: GSM5044766 sample_title: T25 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_25; pathology: Glioblastoma T25 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044767 Runtime Siftome inference GEO:sample:GSM5044767:b4355e73fbf6553d783510cf3812c506934e41cb313a1d8523f5b9de026a1fc0 low confidence normal sample_accession: GSM5044767 sample_title: N14 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_28; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044767 Runtime Siftome inference GEO:sample:GSM5044767:b4355e73fbf6553d783510cf3812c506934e41cb313a1d8523f5b9de026a1fc0 low confidence tumor sample_accession: GSM5044767 sample_title: N14 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_28; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044768 Runtime Siftome inference GEO:sample:GSM5044768:0efc62e86f090a0e60ef67b40530058215b0e7dfd7faaa023430bcf3afed9253 low confidence tumor sample_accession: GSM5044768 sample_title: T14 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_28; pathology: Glioblastoma T14 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044769 Runtime Siftome inference GEO:sample:GSM5044769:649c0899a5d16577065d7532a958c047977ac9aea5505209aba337f7184d204e low confidence normal sample_accession: GSM5044769 sample_title: N16 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_29; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044769 Runtime Siftome inference GEO:sample:GSM5044769:649c0899a5d16577065d7532a958c047977ac9aea5505209aba337f7184d204e low confidence tumor sample_accession: GSM5044769 sample_title: N16 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_29; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044770 Runtime Siftome inference GEO:sample:GSM5044770:03a2f05ef8c7fadf5fa09e4d97a34367ee1ae0e5b6169d0aa4ab306cd03e585d low confidence tumor sample_accession: GSM5044770 sample_title: T16 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_29; pathology: Glioblastoma T16 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044771 Runtime Siftome inference GEO:sample:GSM5044771:37eab6519966a390b4a1e7874f4b72c751f4657de4146c04f590b6759c068653 low confidence normal sample_accession: GSM5044771 sample_title: N21 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_30; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044771 Runtime Siftome inference GEO:sample:GSM5044771:37eab6519966a390b4a1e7874f4b72c751f4657de4146c04f590b6759c068653 low confidence tumor sample_accession: GSM5044771 sample_title: N21 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_30; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044772 Runtime Siftome inference GEO:sample:GSM5044772:81318bbd0b6db1bb3df2c47e9effb439649585ce66434833d2881e8f3b2a661e low confidence tumor sample_accession: GSM5044772 sample_title: T21 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_30; pathology: Glioblastoma T21 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044773 Runtime Siftome inference GEO:sample:GSM5044773:c76ddb9e0535ddab76ee28ae928b193791eb21e75395d6f73be39b43acaded88 low confidence normal sample_accession: GSM5044773 sample_title: N40 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_32; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044773 Runtime Siftome inference GEO:sample:GSM5044773:c76ddb9e0535ddab76ee28ae928b193791eb21e75395d6f73be39b43acaded88 low confidence tumor sample_accession: GSM5044773 sample_title: N40 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_32; pathology: Glioblastoma... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044774 Runtime Siftome inference GEO:sample:GSM5044774:30ea4085d060f1687f8abf37d778f21d058f9a292164b75481d350e53fd36966 low confidence tumor sample_accession: GSM5044774 sample_title: T40 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_32; pathology: Glioblastoma T40 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044775 Runtime Siftome inference GEO:sample:GSM5044775:51e44c07de2db0701b22f81d19434d3414c6b2f196554d1dbd462381fe9b4a81 low confidence normal sample_accession: GSM5044775 sample_title: N42-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_34; pathology: Glioblasto... controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044775 Runtime Siftome inference GEO:sample:GSM5044775:51e44c07de2db0701b22f81d19434d3414c6b2f196554d1dbd462381fe9b4a81 low confidence tumor sample_accession: GSM5044775 sample_title: N42-1 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_34; pathology: Glioblasto... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044776 Runtime Siftome inference GEO:sample:GSM5044776:5fa3234da7c88caace98e02a55f5c6135cbedfbf5251c30c5ac3049958521237 low confidence tumor sample_accession: GSM5044776 sample_title: T42 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_34; pathology: Glioblastoma T42 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5044777 Runtime Siftome inference GEO:sample:GSM5044777:708469d8ef2356c772cc6d801c8adb23a0a977c65abe5517fb2a65f505b3e991 low confidence normal sample_accession: GSM5044777 sample_title: N4 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_9; pathology: Glioblastoma N4 controlled vocabulary controlled vocabulary sample type match: normal
sample_type tumor sample sample GSM5044777 Runtime Siftome inference GEO:sample:GSM5044777:708469d8ef2356c772cc6d801c8adb23a0a977c65abe5517fb2a65f505b3e991 low confidence tumor sample_accession: GSM5044777 sample_title: N4 source_name: human brain tissue characteristics: tissue: brain; tumor status: Normal; patient id: Case_9; pathology: Glioblastoma N4 controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5044778 Runtime Siftome inference GEO:sample:GSM5044778:8e6726ddd5f89b96e91ada7c8a8b06abbd207d61457b40b4d5dde906e33545e8 low confidence tumor sample_accession: GSM5044778 sample_title: T4 source_name: human brain tissue characteristics: tissue: brain; tumor status: Tumor; patient id: Case_9; pathology: Glioblastoma T4 controlled vocabulary controlled vocabulary sample type match: tumor

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

41
  • GSM5044698 T35 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_1; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044700 T37 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_2; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044702 T38 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_3; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044704 T54 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_44; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044706 T55 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_45; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044708 T56 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_46; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044710 T43-1 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_35; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044712 T44 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_36; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044714 T45 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_37; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044716 T46 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_38; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044718 T47 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_39; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044720 T31 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_4; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044722 T49 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_41; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044724 T32 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_5; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044726 T33 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_6; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044728 T51 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_42; pathology: IDH mutant astrocytoma grade 2
  • GSM5044730 T52 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_43; pathology: IDH mutant astrocytoma grade 2
  • GSM5044732 T1 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_7; pathology: IDH mutant astrocytoma grade 2
  • GSM5044734 T2 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_8; pathology: IDH mutant astrocytoma grade 2
  • GSM5044736 T7 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_11; pathology: IDH mutant astrocytoma grade 3
  • GSM5044738 T8 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_13; pathology: IDH mutant astrocytoma grade 3
  • GSM5044740 T17 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_19; pathology: IDH mutant astrocytoma grade 3
  • GSM5044742 T39 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_31; pathology: IDH mutant astrocytoma grade 3
  • GSM5044744 T41 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_33; pathology: IDH mutant astrocytoma grade 3
  • GSM5044746 T26 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_26; pathology: IDH mutant astrocytoma grade 4
  • GSM5044748 T27 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_27; pathology: IDH mutant astrocytoma grade 4
  • GSM5044750 T6 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_10; pathology: Glioblastoma
  • GSM5044752 T12 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_17; pathology: Glioblastoma
  • GSM5044754 T13 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_18; pathology: Glioblastoma
  • GSM5044756 T18 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_20; pathology: Glioblastoma
  • GSM5044758 T19 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_21; pathology: Glioblastoma
  • GSM5044760 T20 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_22; pathology: Glioblastoma
  • GSM5044762 T22 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_23; pathology: Glioblastoma
  • GSM5044764 T24 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_24; pathology: Glioblastoma
  • GSM5044766 T25 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_25; pathology: Glioblastoma
  • GSM5044768 T14 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_28; pathology: Glioblastoma
  • GSM5044770 T16 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_29; pathology: Glioblastoma
  • GSM5044772 T21 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_30; pathology: Glioblastoma
  • GSM5044774 T40 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_32; pathology: Glioblastoma
  • GSM5044776 T42 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_34; pathology: Glioblastoma
  • GSM5044778 T4 tumor sample Case marker detected. human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_9; pathology: Glioblastoma

Possible control samples

Samples currently treated as controls or baseline.

41
  • GSM5044697 N35 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_1; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044699 N37 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_2; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044701 N38 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_3; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044703 N54 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_44; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044705 N55-2 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_45; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044707 N48-1 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_46; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044709 N43-1 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_35; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044711 N44 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_36; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044713 N45-2 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_37; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044715 N46-2 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_38; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044717 N47-2 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_39; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044719 N31 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_4; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044721 N49 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_41; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044723 N32 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_5; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044725 N33 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_6; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044727 N51-1 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_42; pathology: IDH mutant astrocytoma grade 2
  • GSM5044729 N52 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_43; pathology: IDH mutant astrocytoma grade 2
  • GSM5044731 N1 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_7; pathology: IDH mutant astrocytoma grade 2
  • GSM5044733 N2 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_8; pathology: IDH mutant astrocytoma grade 2
  • GSM5044735 N7 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_11; pathology: IDH mutant astrocytoma grade 3
  • GSM5044737 N8 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_13; pathology: IDH mutant astrocytoma grade 3
  • GSM5044739 N17 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_19; pathology: IDH mutant astrocytoma grade 3
  • GSM5044741 N39 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_31; pathology: IDH mutant astrocytoma grade 3
  • GSM5044743 N41 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_33; pathology: IDH mutant astrocytoma grade 3
  • GSM5044745 N26 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_26; pathology: IDH mutant astrocytoma grade 4
  • GSM5044747 N27 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_27; pathology: IDH mutant astrocytoma grade 4
  • GSM5044749 N6 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_10; pathology: Glioblastoma
  • GSM5044751 N12 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_17; pathology: Glioblastoma
  • GSM5044753 N13 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_18; pathology: Glioblastoma
  • GSM5044755 N18 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_20; pathology: Glioblastoma
  • GSM5044757 N19 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_21; pathology: Glioblastoma
  • GSM5044759 N20 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_22; pathology: Glioblastoma
  • GSM5044761 N22 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_23; pathology: Glioblastoma
  • GSM5044763 N24 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_24; pathology: Glioblastoma
  • GSM5044765 N25 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_25; pathology: Glioblastoma
  • GSM5044767 N14 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_28; pathology: Glioblastoma
  • GSM5044769 N16 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_29; pathology: Glioblastoma
  • GSM5044771 N21 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_30; pathology: Glioblastoma
  • GSM5044773 N40 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_32; pathology: Glioblastoma
  • GSM5044775 N42-1 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_34; pathology: Glioblastoma
  • GSM5044777 N4 normal tissue Control marker detected. human brain tissue tissue: brain; tumor status: Normal; patient id: Case_9; pathology: Glioblastoma

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

70 pts
Clarity
70%
Weight
100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata was not normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

normal tissue

41 samples
  • GSM5044697 N35 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_1; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044699 N37 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_2; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044701 N38 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_3; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044703 N54 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_44; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044705 N55-2 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_45; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044707 N48-1 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_46; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044709 N43-1 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_35; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044711 N44 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_36; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044713 N45-2 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_37; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044715 N46-2 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_38; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044717 N47-2 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_39; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044719 N31 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_4; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044721 N49 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_41; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044723 N32 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_5; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044725 N33 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_6; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044727 N51-1 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_42; pathology: IDH mutant astrocytoma grade 2
  • GSM5044729 N52 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_43; pathology: IDH mutant astrocytoma grade 2
  • GSM5044731 N1 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_7; pathology: IDH mutant astrocytoma grade 2
  • GSM5044733 N2 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_8; pathology: IDH mutant astrocytoma grade 2
  • GSM5044735 N7 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_11; pathology: IDH mutant astrocytoma grade 3
  • GSM5044737 N8 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_13; pathology: IDH mutant astrocytoma grade 3
  • GSM5044739 N17 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_19; pathology: IDH mutant astrocytoma grade 3
  • GSM5044741 N39 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_31; pathology: IDH mutant astrocytoma grade 3
  • GSM5044743 N41 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_33; pathology: IDH mutant astrocytoma grade 3
  • GSM5044745 N26 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_26; pathology: IDH mutant astrocytoma grade 4
  • GSM5044747 N27 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_27; pathology: IDH mutant astrocytoma grade 4
  • GSM5044749 N6 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_10; pathology: Glioblastoma
  • GSM5044751 N12 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_17; pathology: Glioblastoma
  • GSM5044753 N13 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_18; pathology: Glioblastoma
  • GSM5044755 N18 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_20; pathology: Glioblastoma
  • GSM5044757 N19 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_21; pathology: Glioblastoma
  • GSM5044759 N20 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_22; pathology: Glioblastoma
  • GSM5044761 N22 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_23; pathology: Glioblastoma
  • GSM5044763 N24 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_24; pathology: Glioblastoma
  • GSM5044765 N25 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_25; pathology: Glioblastoma
  • GSM5044767 N14 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_28; pathology: Glioblastoma
  • GSM5044769 N16 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_29; pathology: Glioblastoma
  • GSM5044771 N21 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_30; pathology: Glioblastoma
  • GSM5044773 N40 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_32; pathology: Glioblastoma
  • GSM5044775 N42-1 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_34; pathology: Glioblastoma
  • GSM5044777 N4 human brain tissue tissue: brain; tumor status: Normal; patient id: Case_9; pathology: Glioblastoma

tumor sample

41 samples
  • GSM5044698 T35 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_1; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044700 T37 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_2; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044702 T38 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_3; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044704 T54 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_44; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044706 T55 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_45; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044708 T56 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_46; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 2
  • GSM5044710 T43-1 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_35; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044712 T44 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_36; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044714 T45 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_37; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044716 T46 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_38; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044718 T47 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_39; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044720 T31 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_4; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044722 T49 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_41; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044724 T32 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_5; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044726 T33 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_6; pathology: oligodendroglioma IDH mutant and 1p/19q-codeleted grade 3
  • GSM5044728 T51 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_42; pathology: IDH mutant astrocytoma grade 2
  • GSM5044730 T52 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_43; pathology: IDH mutant astrocytoma grade 2
  • GSM5044732 T1 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_7; pathology: IDH mutant astrocytoma grade 2
  • GSM5044734 T2 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_8; pathology: IDH mutant astrocytoma grade 2
  • GSM5044736 T7 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_11; pathology: IDH mutant astrocytoma grade 3
  • GSM5044738 T8 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_13; pathology: IDH mutant astrocytoma grade 3
  • GSM5044740 T17 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_19; pathology: IDH mutant astrocytoma grade 3
  • GSM5044742 T39 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_31; pathology: IDH mutant astrocytoma grade 3
  • GSM5044744 T41 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_33; pathology: IDH mutant astrocytoma grade 3
  • GSM5044746 T26 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_26; pathology: IDH mutant astrocytoma grade 4
  • GSM5044748 T27 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_27; pathology: IDH mutant astrocytoma grade 4
  • GSM5044750 T6 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_10; pathology: Glioblastoma
  • GSM5044752 T12 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_17; pathology: Glioblastoma
  • GSM5044754 T13 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_18; pathology: Glioblastoma
  • GSM5044756 T18 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_20; pathology: Glioblastoma
  • GSM5044758 T19 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_21; pathology: Glioblastoma
  • GSM5044760 T20 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_22; pathology: Glioblastoma
  • GSM5044762 T22 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_23; pathology: Glioblastoma
  • GSM5044764 T24 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_24; pathology: Glioblastoma
  • GSM5044766 T25 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_25; pathology: Glioblastoma
  • GSM5044768 T14 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_28; pathology: Glioblastoma
  • GSM5044770 T16 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_29; pathology: Glioblastoma
  • GSM5044772 T21 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_30; pathology: Glioblastoma
  • GSM5044774 T40 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_32; pathology: Glioblastoma
  • GSM5044776 T42 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_34; pathology: Glioblastoma
  • GSM5044778 T4 human brain tissue tissue: brain; tumor status: Tumor; patient id: Case_9; pathology: Glioblastoma

Score Breakdown

50%

relevance

  • Organism normalized.
  • Assay type normalized.
0%

comparison suitability

  • Tumor and normal sample groups detected.
  • No excluded sample type flags detected.
  • Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
  • Patient tissue or biopsy specimens boosted for tissue comparison triage.
  • Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
70%

metadata quality

  • Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
  • Group clarity: Rule-based grouping found both case and control samples.
  • Disease clarity: Disease or condition metadata was not normalized.
  • Tissue clarity: Tissue metadata was not normalized.
  • Treatment clarity: No unclear treatment split detected in the sample metadata.
  • Replicate clarity: No pooled sample or technical replicate flags detected.
  • Data availability clarity: Dataset-level processed or raw data availability is explicit.
100%

data availability

  • Processed data available.
  • Raw data available.
34%

overall

  • Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Sample Links

82 samples

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.