Siftome Phase 3L

GSE167573

Next generation sequencing of TFE3-translocation renal cell carcinoma and adjacent normal tissue transcriptomes

Not suitable Dataset does not meet the current suitability threshold.
Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset
Source
GEO
Search intent
Patient tissue tumor-vs-normal
Intent behavior
search-intent-behavior-v1
Submission date
2021-02-25
Last update
2021-09-13
Organization
GloriousMed Technology Co., Ltd.
Department
Not available
Public date
2021-07-24
Experiment types
Expression profiling by high throughput sequencing
Platforms
GPL20795 HiSeq X Ten (Homo sapiens)
Series type
Series
SubSeries
Not available
BioProject
PRJNA704974
Supplementary files
TXT: GSE167573_Processed_normalized_count_matrix.txt.gz
Organism
Homo sapiens
Assay
bulk RNA-seq
Samples
77
Study design
Tumor vs matched normal
Specimen/source
Tissue
Scoring version
intent-aware-scoring-v15
Ranking batch
b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created
2026-06-05T20:20:27.088676Z
Warning version
intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism
Homo sapiens
Assay
bulk RNA-seq
Specimen/source
patient tissue or biopsy
Controls
matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters
Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules
missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps
non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts
microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs matched normal Tissue

Analysis Readiness

Ready after review
94% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

7/10 pts

Metadata quality is usable, but still deserves review.

Blockers

No readiness blockers detected.

Next Steps

  • Review the sample grouping CSV and contrast CSV before running differential expression.
  • Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

No expert-review triggers were detected by Siftome.

Why This Is Ranked Here

Patient tissue tumor-vs-normal
Not suitable Dataset does not meet the current suitability threshold.

Score Components

  • relevance 50% Organism normalized. Assay type normalized.
  • comparison suitability 0% Tumor and normal sample groups detected. No excluded sample type flags detected. Matched tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
  • metadata quality 70% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata was not normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
  • data availability 100% Processed data available. Raw data available.
  • overall 34% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Derived Classifications

  • Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
  • Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
  • Study design Tumor vs matched normal Study design remains rule-derived: Tumor vs matched normal.
  • Specimen/source Tissue Specimen/source remains rule-derived: Tissue.
  • Likely case group tumor sample 63 samples
  • Likely control group normal tissue 14 samples

Warnings

  • DISEASE_LABEL_UNCLEAR warning Disease or condition label could not be normalized.
  • TISSUE_TYPE_MISSING warning Tissue or cell type could not be normalized.

Intent Interpretation

  • Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
  • Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
  • Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
  • Specimen assumption patient tissue or biopsy Derived specimen/source is Tissue.
  • Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs matched normal; likely groups are tumor sample vs normal tissue.
  • Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
  • Warning rules 2 active warnings missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
  • Downgrade or exclusion reason Downgraded disease context: colorectal/GI relevance is unclear. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

  • Recommendation Not suitable Dataset does not meet the current suitability threshold.
  • Supporting fact Tumor vs matched normal · Tissue · suitability 0%. Contributed to match or upgrade evidence.
  • Supporting fact Prioritized for patient tissue tumor-vs-normal triage. Contributed to match or upgrade evidence.
  • Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
  • Supporting fact Downgraded disease context: colorectal/GI relevance is unclear. Contributed to match or upgrade evidence.
  • Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
  • Supporting fact 2 warnings require review. Contributed to match or upgrade evidence.
  • Caution fact Disease or condition label could not be normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Tissue or cell type could not be normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Tissue clarity: Tissue metadata was not normalized. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
  • Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
  • Caution fact Overall score capped because tumor/normal grouping is from a non-colorectal cancer context. Contributed to downgrade or manual-review evidence.
  • Caution fact Downgraded disease context: colorectal/GI relevance is unclear. Contributed to downgrade or manual-review evidence.
  • Caution fact Missing or unclear metadata: Downgraded disease context: colorectal/GI relevance is unclear. Contributed to downgrade or manual-review evidence.
  • Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession
GSE167573
Sample records
77 GSM samples
  • GEO has priority for original metadata under the Phase 3J source rules.
  • Processed data: available.
  • Raw data: available.
  • No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession
GSE167573
  • No recount3 project identifier has been imported for this dataset.
  • Once imported, recount3 has priority for processed count availability.
  • The recount3 source filter excludes this dataset until that linkage exists.
No recount3 sync data available.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession
GSE167573
  • No Expression Atlas experiment identifier has been imported for this dataset.
  • Once imported, Expression Atlas has priority for curated expression experiment links.
  • The Expression Atlas source filter excludes this dataset until that linkage exists.
No Expression Atlas sync data available.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession
GSE167573
  • No PubMed identifier is present in the current runtime metadata.
  • No live PubMed search is performed from the dataset detail page.
No publication identifier imported.

Dataset Feedback

0 stored

Original GEO Metadata

dataset_accession: GSE167573
dataset_title: Next generation sequencing  of TFE3-translocation renal cell carcinoma and adjacent normal tissue transcriptomes
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2021-02-25
last_update_date: 2021-09-13
organization_name: GloriousMed Technology Co., Ltd.
department: Not available
public_date: 2021-07-24
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL20795 HiSeq X Ten (Homo sapiens)
sub_series: Not available
bioproject: PRJNA704974
supplementary_files: TXT: GSE167573_Processed_normalized_count_matrix.txt.gz
series_type: Series

Why It Matched

  • Tumor vs matched normal · Tissue · suitability 0%.
  • Prioritized for patient tissue tumor-vs-normal triage.
  • Prioritized assay: bulk RNA-seq is the active assay expectation.
  • Downgraded disease context: colorectal/GI relevance is unclear.
  • Processed data is available for downstream review.
  • 2 warnings require review.

Why It May Not Be Suitable

  • Disease or condition label could not be normalized.
  • Tissue or cell type could not be normalized.
  • Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
  • Missing or unclear metadata: Disease clarity: Disease or condition metadata was not normalized.
  • Missing or unclear metadata: Tissue clarity: Tissue metadata was not normalized.
  • Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.
  • Downgraded disease context: colorectal/GI relevance is unclear.
  • Missing or unclear metadata: Downgraded disease context: colorectal/GI relevance is unclear.
  • Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

  • warning DISEASE_LABEL_UNCLEAR Disease or condition label could not be normalized.
  • warning TISSUE_TYPE_MISSING Tissue or cell type could not be normalized.

Normalized Fields

93 fields
Field Value Source Origin Confidence Evidence Reason
assay_type bulk RNA-seq dataset GSE167573 Runtime Siftome inference GEO:dataset:GSE167573:1c72d8902c1237cdbbf60681eb76f8d9c86632e5505d12f04f517bf6699aeadc high confidence bulk rna-seq dataset_accession: GSE167573 dataset_title: Next generation sequencing of TFE3-translocation renal cell carcinoma and adjacent normal tissue transcriptomes organism: Homo sapien... keyword match keyword match: bulk rna-seq
normal_tissue_type adjacent normal sample GSM5107793 Runtime Siftome inference GEO:sample:GSM5107793:c9736069bf0d44cb913eca778c7fafa399c4d496e3231d3be749f4315103c274 high confidence adjacent normal sample_accession: GSM5107793 sample_title: TFE3-N-1 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-1 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107796 Runtime Siftome inference GEO:sample:GSM5107796:4d61ac31761ea6477531ef9329d90e445616cb63de163a3a469421a97aa3ae9c high confidence adjacent normal sample_accession: GSM5107796 sample_title: TFE3-N-19 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-19 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107797 Runtime Siftome inference GEO:sample:GSM5107797:f2dea42acd66414d2f57b1f6225a777df265594f6d7b27214b25d4abbc46e51e high confidence adjacent normal sample_accession: GSM5107797 sample_title: TFE3-N-20 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-20 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107799 Runtime Siftome inference GEO:sample:GSM5107799:792ba694bb78a228f53e17e4bd08e02e37af673d90a99995e24ba0415635c728 high confidence adjacent normal sample_accession: GSM5107799 sample_title: TFE3-N-31 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-31 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107801 Runtime Siftome inference GEO:sample:GSM5107801:69dbf2bae9c55c19baf1ab7bddefafa321840e984004a99c300465926b0879f1 high confidence adjacent normal sample_accession: GSM5107801 sample_title: TFE3-N-35 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-35 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107802 Runtime Siftome inference GEO:sample:GSM5107802:9ec54602a5a20e837f3d6f5652b15ed4df9ec41768b6c8cafc790d5ecd13b899 high confidence adjacent normal sample_accession: GSM5107802 sample_title: TFE3-N-36 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-36 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107804 Runtime Siftome inference GEO:sample:GSM5107804:ff8660241f76635e59fbc9bb394dbd664165b597e9fbe79befb5802592d22362 high confidence adjacent normal sample_accession: GSM5107804 sample_title: TFE3-N-44 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-44 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107805 Runtime Siftome inference GEO:sample:GSM5107805:e9be54d0775dab03e0f249d36492811b6568cc731f8f664e033f1a96e89b8c86 high confidence adjacent normal sample_accession: GSM5107805 sample_title: TFE3-N-46 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-46 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107808 Runtime Siftome inference GEO:sample:GSM5107808:a0858de03652529b8a13b7bf3f42329a0878e37a5ccc7be5c9394222e587f6fe high confidence adjacent normal sample_accession: GSM5107808 sample_title: TFE3-N-50 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-50 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107809 Runtime Siftome inference GEO:sample:GSM5107809:228b97e21338d70a09d88f224969263e35f9b7eab3555608f731e013861f1abd high confidence adjacent normal sample_accession: GSM5107809 sample_title: TFE3-N-51 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-51 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107810 Runtime Siftome inference GEO:sample:GSM5107810:09a28c79b4ff3490bce73920ce16a2e6a658987c4b3cba2bdae367eb4e863c09 high confidence adjacent normal sample_accession: GSM5107810 sample_title: TFE3-N-53 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-53 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107812 Runtime Siftome inference GEO:sample:GSM5107812:5ea663bf3ccbb591cb603f976acade8ec9e15389824cc94baa0b5f48653cbed3 high confidence adjacent normal sample_accession: GSM5107812 sample_title: TFE3-N-59 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-59 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5107814 Runtime Siftome inference GEO:sample:GSM5107814:4c2bb94f395f36d340103724837dc0e7171ede95b13057e0125ab5aa4bf5aa0a high confidence adjacent normal sample_accession: GSM5107814 sample_title: TFE3-N-67 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-67 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
normal_tissue_type adjacent normal sample GSM5508078 Runtime Siftome inference GEO:sample:GSM5508078:b427feb0edc0f8e97eec151f13cfa95f29ddcdc31f8c1e7c4b8422c9df231f38 high confidence adjacent normal sample_accession: GSM5508078 sample_title: TFE3-N-26 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-26 controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal
organism Homo sapiens dataset GSE167573 Runtime Siftome inference GEO:dataset:GSE167573:1c72d8902c1237cdbbf60681eb76f8d9c86632e5505d12f04f517bf6699aeadc high confidence homo sapiens dataset_accession: GSE167573 dataset_title: Next generation sequencing of TFE3-translocation renal cell carcinoma and adjacent normal tissue transcriptomes organism: Homo sapien... keyword match keyword match: homo sapiens
sample_type tumor sample sample GSM5107730 Runtime Siftome inference GEO:sample:GSM5107730:ba2d425714e55524f391e2b31f909beff770d7629302d3887f56fb7fcd3c0379 low confidence tumor sample_accession: GSM5107730 sample_title: TFE3-1 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107731 Runtime Siftome inference GEO:sample:GSM5107731:a24a2973dc1bc00e1c618a3a67d7692a562998a733394f0fcb72073388c5990d low confidence tumor sample_accession: GSM5107731 sample_title: TFE3-2 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107732 Runtime Siftome inference GEO:sample:GSM5107732:dd43e287c841841adea5e9a7a63918fcb7d84733aa6ab6c913afffc29b677cf2 low confidence tumor sample_accession: GSM5107732 sample_title: TFE3-3 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107733 Runtime Siftome inference GEO:sample:GSM5107733:ce5ff4ca4740fccc15b3c84d67c80e64a224da4a3dbb6705ada100563670d655 low confidence tumor sample_accession: GSM5107733 sample_title: TFE3-4 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107734 Runtime Siftome inference GEO:sample:GSM5107734:a173d9790838d21c9e8d1815f89a3766ee51ebe899be671528f80ccff4601fee low confidence tumor sample_accession: GSM5107734 sample_title: TFE3-5 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107735 Runtime Siftome inference GEO:sample:GSM5107735:62ef8f9c1d22ca3f3ded9f827da3bf8264ac04102bbfac550299155af887aeae low confidence tumor sample_accession: GSM5107735 sample_title: TFE3-6 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107736 Runtime Siftome inference GEO:sample:GSM5107736:4789a12ec0ab6ef50307cd0382bdba4941d192d99f3bb94f985eba9d197c167e low confidence tumor sample_accession: GSM5107736 sample_title: TFE3-7 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107737 Runtime Siftome inference GEO:sample:GSM5107737:b6c0311300a0c79b71fbbc47b0808491bf2b839d8cdf032af361b7875d2a3118 low confidence tumor sample_accession: GSM5107737 sample_title: TFE3-8 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107738 Runtime Siftome inference GEO:sample:GSM5107738:deed9e1f65da1af18b745aa71d86ba5984ae6f8e2dc5be888899fc2bd19dfb7c low confidence tumor sample_accession: GSM5107738 sample_title: TFE3-9 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumo... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107739 Runtime Siftome inference GEO:sample:GSM5107739:938202a5e56a9a69ecb2969585a2e5be48af6fcf6026e37c59b6b48069cec501 low confidence tumor sample_accession: GSM5107739 sample_title: TFE3-10 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107740 Runtime Siftome inference GEO:sample:GSM5107740:8273c673f9e53027e3bfcb4adf2c84b56210ca97784dbe3c6f661b12851e0689 low confidence tumor sample_accession: GSM5107740 sample_title: TFE3-11 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107741 Runtime Siftome inference GEO:sample:GSM5107741:f969d86e2c8921c641389d7375f12663ad4f3b3d7d5be9bb56a78ee5789d669a low confidence tumor sample_accession: GSM5107741 sample_title: TFE3-12 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107742 Runtime Siftome inference GEO:sample:GSM5107742:922338076c8d5dc8d3439d94d2c13be3070397df67bd0f64631d18a017d590f5 low confidence tumor sample_accession: GSM5107742 sample_title: TFE3-13 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107743 Runtime Siftome inference GEO:sample:GSM5107743:c721abaa655fc5eceeb7962763c85ed459698aaed8f1003b196044c3d47bad64 low confidence tumor sample_accession: GSM5107743 sample_title: TFE3-14 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107744 Runtime Siftome inference GEO:sample:GSM5107744:8b2f03d6d8d498c76d904acd74294e0d8a7a0a8405fc9c02952f82a4869f4fc9 low confidence tumor sample_accession: GSM5107744 sample_title: TFE3-15 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107745 Runtime Siftome inference GEO:sample:GSM5107745:8ee1f44f6bef500acd872b9ecb5f4e023ce4e61023c1356b5e7ffd33a46305bf low confidence tumor sample_accession: GSM5107745 sample_title: TFE3-16 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107746 Runtime Siftome inference GEO:sample:GSM5107746:b3e983a64cc3d8265e47a5771025a3c03cc27dcbdc2eab40f1feda1af69c337e low confidence tumor sample_accession: GSM5107746 sample_title: TFE3-17 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107747 Runtime Siftome inference GEO:sample:GSM5107747:b045622ee613b2a70069a79ff3a402c9a1a02d30f074e6e8b2f574c3d49d6ca5 low confidence tumor sample_accession: GSM5107747 sample_title: TFE3-18 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107748 Runtime Siftome inference GEO:sample:GSM5107748:3737cffb42e2210a31697aec8f013b817d7af47b84f40fad406c15d2d7c56116 low confidence tumor sample_accession: GSM5107748 sample_title: TFE3-19 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107749 Runtime Siftome inference GEO:sample:GSM5107749:820013dbb2d86db84ba43bcff030e86b16a6ccbcba2c554d503df2f6c3bec6d7 low confidence tumor sample_accession: GSM5107749 sample_title: TFE3-20 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107750 Runtime Siftome inference GEO:sample:GSM5107750:4d08801a136f37794cf8ff4900f4dd8542e8ad18878c9fabca974a95ace4bf0f low confidence tumor sample_accession: GSM5107750 sample_title: TFE3-22 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107751 Runtime Siftome inference GEO:sample:GSM5107751:dc684f5e042743a9993a6a0548d0acbf1529de1791edddab92bd82e46370b1d3 low confidence tumor sample_accession: GSM5107751 sample_title: TFE3-23 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107752 Runtime Siftome inference GEO:sample:GSM5107752:d1d587b1de27b382998027ee07a0f99b4665957da1a88b8bfd2c11df2fd287a9 low confidence tumor sample_accession: GSM5107752 sample_title: TFE3-24 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107753 Runtime Siftome inference GEO:sample:GSM5107753:6aa5a8b63b5ec0fe6afa78e0ad1ffc2c2d61fb1347bc004729f8c47b2739f1ff low confidence tumor sample_accession: GSM5107753 sample_title: TFE3-27 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107754 Runtime Siftome inference GEO:sample:GSM5107754:2df1fa726a7fa4e2ffebd7643e21db0ad3f3196ef2867051630a4694d577573d low confidence tumor sample_accession: GSM5107754 sample_title: TFE3-28 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107755 Runtime Siftome inference GEO:sample:GSM5107755:68612740a42aff32f98c0f1e64bb87f08a7ac0c4ca53aeda251ef24c72440a4e low confidence tumor sample_accession: GSM5107755 sample_title: TFE3-29 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107756 Runtime Siftome inference GEO:sample:GSM5107756:819b7a009e88ac22f5506d35b2ca0642eabbe03b423be8d1dd192847ae44181f low confidence tumor sample_accession: GSM5107756 sample_title: TFE3-30 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107757 Runtime Siftome inference GEO:sample:GSM5107757:1caa135030ee8b23c27a61746734962e41c335fd861488838308b8df24e3d474 low confidence tumor sample_accession: GSM5107757 sample_title: TFE3-31 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107758 Runtime Siftome inference GEO:sample:GSM5107758:5571ca2aaee4f6d2c25293eddacc2540f8648f0fa9df0dc9149fd4833a90dc82 low confidence tumor sample_accession: GSM5107758 sample_title: TFE3-32 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107759 Runtime Siftome inference GEO:sample:GSM5107759:85ad22daf0e6a80d64aa98105fdc5506f624e36afae42dec8d98b870f0cd3b65 low confidence tumor sample_accession: GSM5107759 sample_title: TFE3-33 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107760 Runtime Siftome inference GEO:sample:GSM5107760:fe3125c7309cd26f2002c5b418c78fda1f7ca0a794a1d6782428c36bbd0110f8 low confidence tumor sample_accession: GSM5107760 sample_title: TFE3-34 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107761 Runtime Siftome inference GEO:sample:GSM5107761:61d2fb27b13eaabcd53effc6aa6d4820e41ce33b849de59b09551e68c44474ec low confidence tumor sample_accession: GSM5107761 sample_title: TFE3-35 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107762 Runtime Siftome inference GEO:sample:GSM5107762:3ee69f7e5b8a623b595174713dfada05677f24d1c6b01d7864ec7cd2e96079f3 low confidence tumor sample_accession: GSM5107762 sample_title: TFE3-36 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107763 Runtime Siftome inference GEO:sample:GSM5107763:c547738fad9b2146b51b6d5ef5920bf74898f6f72d7d8a54cfce1acd9e8666d9 low confidence tumor sample_accession: GSM5107763 sample_title: TFE3-37 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107764 Runtime Siftome inference GEO:sample:GSM5107764:993dc104fe09f48429cc89629d0802c59dbefe05b121ef78ebd128e5a5c6705f low confidence tumor sample_accession: GSM5107764 sample_title: TFE3-38 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107765 Runtime Siftome inference GEO:sample:GSM5107765:b86df6099517921277050aaf8d2832dcdab55a876d5c24373e9c4b9cc538afbd low confidence tumor sample_accession: GSM5107765 sample_title: TFE3-40 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107766 Runtime Siftome inference GEO:sample:GSM5107766:91b944820964ed90018e1fd3cb5cad7c9d46b95107b558bd7b92946cb42643e1 low confidence tumor sample_accession: GSM5107766 sample_title: TFE3-41 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107767 Runtime Siftome inference GEO:sample:GSM5107767:1dad742fbd7b18337a97ff7c0f46651a7e98be2f833c6ae2b7b3befeca13d48c low confidence tumor sample_accession: GSM5107767 sample_title: TFE3-42 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107768 Runtime Siftome inference GEO:sample:GSM5107768:82b9b7f60151b4fafd3be52eb59262281572bfda215831986d4308ca58b0ec64 low confidence tumor sample_accession: GSM5107768 sample_title: TFE3-43 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107769 Runtime Siftome inference GEO:sample:GSM5107769:82876a1d0c16ab26baac6f169a7fcc723fd22f5edcc6bc87a8f08849f4da618a low confidence tumor sample_accession: GSM5107769 sample_title: TFE3-44 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107770 Runtime Siftome inference GEO:sample:GSM5107770:b6c84a7ea06d2572717a52061072ad0c7def456c819cdd4231601f5e43e5f31b low confidence tumor sample_accession: GSM5107770 sample_title: TFE3-45 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107771 Runtime Siftome inference GEO:sample:GSM5107771:30983967ff171a98f8d7255e9a36a320ebeef73d4e89f967e40eade51a0749cb low confidence tumor sample_accession: GSM5107771 sample_title: TFE3-46 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107772 Runtime Siftome inference GEO:sample:GSM5107772:4b01a51d7133cc71166d39eb9f2a5e4f12e60a93e817fdf7786779ada0a210e5 low confidence tumor sample_accession: GSM5107772 sample_title: TFE3-47 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107773 Runtime Siftome inference GEO:sample:GSM5107773:c7165dbbac064cd6173369604d42b3255ac58787d94e6d75b6a15edf5162688e low confidence tumor sample_accession: GSM5107773 sample_title: TFE3-48 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107774 Runtime Siftome inference GEO:sample:GSM5107774:1de5035e110287843e5fa5e8838ff9158d8ee99133b5a88d3ba1312e410fcaee low confidence tumor sample_accession: GSM5107774 sample_title: TFE3-50 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107775 Runtime Siftome inference GEO:sample:GSM5107775:e826a20e71f949bb050e60324035a83bf384755e50909f2cba9ce34c6b9cfbba low confidence tumor sample_accession: GSM5107775 sample_title: TFE3-51 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107776 Runtime Siftome inference GEO:sample:GSM5107776:c344639009aa5af3dd2a75bf7a3b684a4ed34270852e72096275479daf2bc5b5 low confidence tumor sample_accession: GSM5107776 sample_title: TFE3-52 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107777 Runtime Siftome inference GEO:sample:GSM5107777:74c31392373b697f2cc1ac42b58ab91ab9aab88e460e7d9562f6f3027aac03b3 low confidence tumor sample_accession: GSM5107777 sample_title: TFE3-53 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107778 Runtime Siftome inference GEO:sample:GSM5107778:b24255c2694f67ee96942bec39875831f9c7122453896650dd591eebbbaba839 low confidence tumor sample_accession: GSM5107778 sample_title: TFE3-54 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107779 Runtime Siftome inference GEO:sample:GSM5107779:fe25e49e843d6f06acf04b89db03b6a3b7a55c2e057cb1b8d27df1fccba91f5d low confidence tumor sample_accession: GSM5107779 sample_title: TFE3-55 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107780 Runtime Siftome inference GEO:sample:GSM5107780:7206759c6613ac36f101631dc6f4fe8a832564a8929ffaaeed03291d4ea0e761 low confidence tumor sample_accession: GSM5107780 sample_title: TFE3-56 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107781 Runtime Siftome inference GEO:sample:GSM5107781:591bccaf167f44b02249df1f3170c4177da36fee62ae7f4f965fee111d6c3f17 low confidence tumor sample_accession: GSM5107781 sample_title: TFE3-57 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107782 Runtime Siftome inference GEO:sample:GSM5107782:92785fe87378a513c8081b0a7a0feccdfdf1bf2958e908f6265567e158f31874 low confidence tumor sample_accession: GSM5107782 sample_title: TFE3-58 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107783 Runtime Siftome inference GEO:sample:GSM5107783:1ab015a7fc10d02d636bdbc7ff1d7bb5bdc7650e1ed1dc1f56c01410a1d67d31 low confidence tumor sample_accession: GSM5107783 sample_title: TFE3-59 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107784 Runtime Siftome inference GEO:sample:GSM5107784:601e5fef88f07ef8c66c427b535f2225906b365af20643d840161e42373c2d0f low confidence tumor sample_accession: GSM5107784 sample_title: TFE3-60 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107785 Runtime Siftome inference GEO:sample:GSM5107785:542ca95548c6fda3cd3d0f936fb8a2769c1e8fcea99cd4353daba6a089daf788 low confidence tumor sample_accession: GSM5107785 sample_title: TFE3-62 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107786 Runtime Siftome inference GEO:sample:GSM5107786:20505d7df5c7c218ccefea4997e44b6448cf93a9ee84cea7f63858c117474555 low confidence tumor sample_accession: GSM5107786 sample_title: TFE3-63 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107787 Runtime Siftome inference GEO:sample:GSM5107787:afec92dbbd669256a7fbbd8e65e917e6460d1510e8da62f7d088687fee38435e low confidence tumor sample_accession: GSM5107787 sample_title: TFE3-64 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107788 Runtime Siftome inference GEO:sample:GSM5107788:a920b1aad4609e4359f19ab0d1330f1587a83950a71d32d80b65d22cff5c6209 low confidence tumor sample_accession: GSM5107788 sample_title: TFE3-65 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107789 Runtime Siftome inference GEO:sample:GSM5107789:7d1ce04cf7873d39c53b709e22c4d508f8bcde74489492c90406fc38b5467101 low confidence tumor sample_accession: GSM5107789 sample_title: TFE3-66 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107790 Runtime Siftome inference GEO:sample:GSM5107790:d667189814ddf20ce99ba9d6de107d20e085c9ebe2ad67e72da2cfb33e51359a low confidence tumor sample_accession: GSM5107790 sample_title: TFE3-67 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107791 Runtime Siftome inference GEO:sample:GSM5107791:7c3c7373a71a38441fdda86b2e465226d96f5ab20ffdc443981ad2815f350a4b low confidence tumor sample_accession: GSM5107791 sample_title: TFE3-69 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type tumor sample sample GSM5107792 Runtime Siftome inference GEO:sample:GSM5107792:b6f7a366ec6b89270ac121a7d6f7d7be41444bbc16d54c81979057c44822b9c3 low confidence tumor sample_accession: GSM5107792 sample_title: TFE3-70 source_name: Renal characteristics: tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tum... controlled vocabulary controlled vocabulary sample type match: tumor
sample_type normal tissue sample GSM5107793 Runtime Siftome inference GEO:sample:GSM5107793:c9736069bf0d44cb913eca778c7fafa399c4d496e3231d3be749f4315103c274 high confidence adjacent normal sample_accession: GSM5107793 sample_title: TFE3-N-1 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-1 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107796 Runtime Siftome inference GEO:sample:GSM5107796:4d61ac31761ea6477531ef9329d90e445616cb63de163a3a469421a97aa3ae9c high confidence adjacent normal sample_accession: GSM5107796 sample_title: TFE3-N-19 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-19 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107797 Runtime Siftome inference GEO:sample:GSM5107797:f2dea42acd66414d2f57b1f6225a777df265594f6d7b27214b25d4abbc46e51e high confidence adjacent normal sample_accession: GSM5107797 sample_title: TFE3-N-20 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-20 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107799 Runtime Siftome inference GEO:sample:GSM5107799:792ba694bb78a228f53e17e4bd08e02e37af673d90a99995e24ba0415635c728 high confidence adjacent normal sample_accession: GSM5107799 sample_title: TFE3-N-31 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-31 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107801 Runtime Siftome inference GEO:sample:GSM5107801:69dbf2bae9c55c19baf1ab7bddefafa321840e984004a99c300465926b0879f1 high confidence adjacent normal sample_accession: GSM5107801 sample_title: TFE3-N-35 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-35 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107802 Runtime Siftome inference GEO:sample:GSM5107802:9ec54602a5a20e837f3d6f5652b15ed4df9ec41768b6c8cafc790d5ecd13b899 high confidence adjacent normal sample_accession: GSM5107802 sample_title: TFE3-N-36 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-36 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107804 Runtime Siftome inference GEO:sample:GSM5107804:ff8660241f76635e59fbc9bb394dbd664165b597e9fbe79befb5802592d22362 high confidence adjacent normal sample_accession: GSM5107804 sample_title: TFE3-N-44 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-44 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107805 Runtime Siftome inference GEO:sample:GSM5107805:e9be54d0775dab03e0f249d36492811b6568cc731f8f664e033f1a96e89b8c86 high confidence adjacent normal sample_accession: GSM5107805 sample_title: TFE3-N-46 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-46 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107808 Runtime Siftome inference GEO:sample:GSM5107808:a0858de03652529b8a13b7bf3f42329a0878e37a5ccc7be5c9394222e587f6fe high confidence adjacent normal sample_accession: GSM5107808 sample_title: TFE3-N-50 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-50 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107809 Runtime Siftome inference GEO:sample:GSM5107809:228b97e21338d70a09d88f224969263e35f9b7eab3555608f731e013861f1abd high confidence adjacent normal sample_accession: GSM5107809 sample_title: TFE3-N-51 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-51 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107810 Runtime Siftome inference GEO:sample:GSM5107810:09a28c79b4ff3490bce73920ce16a2e6a658987c4b3cba2bdae367eb4e863c09 high confidence adjacent normal sample_accession: GSM5107810 sample_title: TFE3-N-53 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-53 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107812 Runtime Siftome inference GEO:sample:GSM5107812:5ea663bf3ccbb591cb603f976acade8ec9e15389824cc94baa0b5f48653cbed3 high confidence adjacent normal sample_accession: GSM5107812 sample_title: TFE3-N-59 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-59 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5107814 Runtime Siftome inference GEO:sample:GSM5107814:4c2bb94f395f36d340103724837dc0e7171ede95b13057e0125ab5aa4bf5aa0a high confidence adjacent normal sample_accession: GSM5107814 sample_title: TFE3-N-67 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-67 controlled vocabulary controlled vocabulary sample type match: adjacent normal
sample_type normal tissue sample GSM5508078 Runtime Siftome inference GEO:sample:GSM5508078:b427feb0edc0f8e97eec151f13cfa95f29ddcdc31f8c1e7c4b8422c9df231f38 high confidence adjacent normal sample_accession: GSM5508078 sample_title: TFE3-N-26 source_name: Renal characteristics: tissue: Adjacent normal tissue TFE3-N-26 controlled vocabulary controlled vocabulary sample type match: adjacent normal

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

63
  • GSM5107730 TFE3-1 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 93.7; OS status: 0
  • GSM5107731 TFE3-2 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 104.8; OS status: 0
  • GSM5107732 TFE3-3 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 1; os time (months): 52.3333333333333; OS status: 1
  • GSM5107733 TFE3-4 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 71.9; OS status: 0
  • GSM5107734 TFE3-5 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 4; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 10; OS status: 1
  • GSM5107735 TFE3-6 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 65.3; OS status: 0
  • GSM5107736 TFE3-7 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 89.4333333333333; OS status: 0
  • GSM5107737 TFE3-8 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 1; os time (months): 20.9; OS status: 1
  • GSM5107738 TFE3-9 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 1; os time (months): 5; OS status: 1
  • GSM5107739 TFE3-10 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 85; OS status: 0
  • GSM5107740 TFE3-11 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 13; OS status: 1
  • GSM5107741 TFE3-12 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 51.1; OS status: 0
  • GSM5107742 TFE3-13 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 49.9; OS status: 0
  • GSM5107743 TFE3-14 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 58.5333333333333; OS status: 1
  • GSM5107744 TFE3-15 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 48.9; OS status: 0
  • GSM5107745 TFE3-16 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 42.2; OS status: 0
  • GSM5107746 TFE3-17 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 65.8333333333333; OS status: 0
  • GSM5107747 TFE3-18 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 64.4666666666667; OS status: 0
  • GSM5107748 TFE3-19 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 47; OS status: 1
  • GSM5107749 TFE3-20 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 55.5; OS status: 0
  • GSM5107750 TFE3-22 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 52; OS status: 0
  • GSM5107751 TFE3-23 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 47.6333333333333; OS status: 0
  • GSM5107752 TFE3-24 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 4; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 27; OS status: 1
  • GSM5107753 TFE3-27 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 45.9333333333333; OS status: 0
  • GSM5107754 TFE3-28 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 44.3333333333333; OS status: 0
  • GSM5107755 TFE3-29 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 40.9; OS status: 0
  • GSM5107756 TFE3-30 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 32.1666666666667; OS status: 0
  • GSM5107757 TFE3-31 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 30.5333333333333; OS status: 0
  • GSM5107758 TFE3-32 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 24; OS status: 1
  • GSM5107759 TFE3-33 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 29.1; OS status: 0
  • GSM5107760 TFE3-34 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 30.2; OS status: 0
  • GSM5107761 TFE3-35 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 11; OS status: 0
  • GSM5107762 TFE3-36 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 1; os time (months): 50.6785714285714; OS status: 0
  • GSM5107763 TFE3-37 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 1; os time (months): 6; OS status: 1
  • GSM5107764 TFE3-38 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 5; OS status: 0
  • GSM5107765 TFE3-40 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 20; OS status: 0
  • GSM5107766 TFE3-41 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 20; OS status: 0
  • GSM5107767 TFE3-42 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 20; OS status: 0
  • GSM5107768 TFE3-43 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 19; OS status: 0
  • GSM5107769 TFE3-44 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 13; OS status: 0
  • GSM5107770 TFE3-45 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 12; OS status: 0
  • GSM5107771 TFE3-46 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 50; OS status: 0
  • GSM5107772 TFE3-47 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 1; os time (months): -; OS status: -
  • GSM5107773 TFE3-48 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): -; OS status: -
  • GSM5107774 TFE3-50 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 8; OS status: 0
  • GSM5107775 TFE3-51 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 6; OS status: 0
  • GSM5107776 TFE3-52 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 6; OS status: 0
  • GSM5107777 TFE3-53 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): -; OS status: -
  • GSM5107778 TFE3-54 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 5; OS status: 0
  • GSM5107779 TFE3-55 tumor sample Case marker detected. Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 4; OS status: 0

13 more samples are hidden from this preview.

Possible control samples

Samples currently treated as controls or baseline.

14
  • GSM5107793 TFE3-N-1 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107796 TFE3-N-19 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107797 TFE3-N-20 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107799 TFE3-N-31 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107801 TFE3-N-35 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107802 TFE3-N-36 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107804 TFE3-N-44 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107805 TFE3-N-46 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107808 TFE3-N-50 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107809 TFE3-N-51 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107810 TFE3-N-53 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107812 TFE3-N-59 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5107814 TFE3-N-67 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue
  • GSM5508078 TFE3-N-26 normal tissue Control marker detected. Renal tissue: Adjacent normal tissue

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

70 pts
Clarity
70%
Weight
100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata was not normalized. Tissue clarity: Tissue metadata was not normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

tumor sample

63 samples
  • GSM5107730 TFE3-1 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 93.7; OS status: 0
  • GSM5107731 TFE3-2 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 104.8; OS status: 0
  • GSM5107732 TFE3-3 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 1; os time (months): 52.3333333333333; OS status: 1
  • GSM5107733 TFE3-4 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 71.9; OS status: 0
  • GSM5107734 TFE3-5 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 4; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 10; OS status: 1
  • GSM5107735 TFE3-6 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 65.3; OS status: 0
  • GSM5107736 TFE3-7 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 89.4333333333333; OS status: 0
  • GSM5107737 TFE3-8 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 1; os time (months): 20.9; OS status: 1
  • GSM5107738 TFE3-9 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 1; os time (months): 5; OS status: 1
  • GSM5107739 TFE3-10 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 85; OS status: 0
  • GSM5107740 TFE3-11 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 13; OS status: 1
  • GSM5107741 TFE3-12 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 51.1; OS status: 0
  • GSM5107742 TFE3-13 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 49.9; OS status: 0
  • GSM5107743 TFE3-14 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 58.5333333333333; OS status: 1
  • GSM5107744 TFE3-15 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 48.9; OS status: 0
  • GSM5107745 TFE3-16 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 42.2; OS status: 0
  • GSM5107746 TFE3-17 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 65.8333333333333; OS status: 0
  • GSM5107747 TFE3-18 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 64.4666666666667; OS status: 0
  • GSM5107748 TFE3-19 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 47; OS status: 1
  • GSM5107749 TFE3-20 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 55.5; OS status: 0
  • GSM5107750 TFE3-22 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 52; OS status: 0
  • GSM5107751 TFE3-23 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 47.6333333333333; OS status: 0
  • GSM5107752 TFE3-24 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 4; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 27; OS status: 1
  • GSM5107753 TFE3-27 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 45.9333333333333; OS status: 0
  • GSM5107754 TFE3-28 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 44.3333333333333; OS status: 0
  • GSM5107755 TFE3-29 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 40.9; OS status: 0
  • GSM5107756 TFE3-30 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 32.1666666666667; OS status: 0
  • GSM5107757 TFE3-31 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 30.5333333333333; OS status: 0
  • GSM5107758 TFE3-32 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 24; OS status: 1
  • GSM5107759 TFE3-33 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 29.1; OS status: 0
  • GSM5107760 TFE3-34 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 30.2; OS status: 0
  • GSM5107761 TFE3-35 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 11; OS status: 0
  • GSM5107762 TFE3-36 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 1; os time (months): 50.6785714285714; OS status: 0
  • GSM5107763 TFE3-37 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 1; os time (months): 6; OS status: 1
  • GSM5107764 TFE3-38 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 5; OS status: 0
  • GSM5107765 TFE3-40 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 20; OS status: 0
  • GSM5107766 TFE3-41 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 20; OS status: 0
  • GSM5107767 TFE3-42 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 20; OS status: 0
  • GSM5107768 TFE3-43 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 19; OS status: 0
  • GSM5107769 TFE3-44 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 13; OS status: 0
  • GSM5107770 TFE3-45 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 12; OS status: 0
  • GSM5107771 TFE3-46 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 50; OS status: 0
  • GSM5107772 TFE3-47 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 1; os time (months): -; OS status: -
  • GSM5107773 TFE3-48 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): -; OS status: -
  • GSM5107774 TFE3-50 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 8; OS status: 0
  • GSM5107775 TFE3-51 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 6; OS status: 0
  • GSM5107776 TFE3-52 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 6; OS status: 0
  • GSM5107777 TFE3-53 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): -; OS status: -
  • GSM5107778 TFE3-54 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 5; OS status: 0
  • GSM5107779 TFE3-55 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 4; OS status: 0
  • GSM5107780 TFE3-56 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 1; os time (months): 2; OS status: 0
  • GSM5107781 TFE3-57 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 2; OS status: 0
  • GSM5107782 TFE3-58 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 0; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 44.6333333333333; OS status: 0
  • GSM5107783 TFE3-59 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): -; OS status: -
  • GSM5107784 TFE3-60 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): -; OS status: -
  • GSM5107785 TFE3-62 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 24; OS status: 0
  • GSM5107786 TFE3-63 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 5.42857142857143; OS status: -
  • GSM5107787 TFE3-64 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): -; OS status: 0
  • GSM5107788 TFE3-65 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 29; OS status: 0
  • GSM5107789 TFE3-66 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 1; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 3; OS status: 0
  • GSM5107790 TFE3-67 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 1; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 2; OS status: 0
  • GSM5107791 TFE3-69 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 1; t stage (1: t1; 2: t2; 3: t3; 4:t4): 2; n stage (0: n0; 1:n1): 0; m stage (0: m0; 1:m1): 0; os time (months): 28.8; OS status: 0
  • GSM5107792 TFE3-70 Renal tissue: Renal cell carcinoma; age(0: <18; 1: ≥18): 1; genotype(1: male; 2: female): 2; tumor size (0: <median; 1: ≥median): 0; t stage (1: t1; 2: t2; 3: t3; 4:t4): 3; n stage (0: n0; 1:n1): 1; m stage (0: m0; 1:m1): 0; os time (months): 3.5; OS status: 0

normal tissue

14 samples
  • GSM5107793 TFE3-N-1 Renal tissue: Adjacent normal tissue
  • GSM5107796 TFE3-N-19 Renal tissue: Adjacent normal tissue
  • GSM5107797 TFE3-N-20 Renal tissue: Adjacent normal tissue
  • GSM5107799 TFE3-N-31 Renal tissue: Adjacent normal tissue
  • GSM5107801 TFE3-N-35 Renal tissue: Adjacent normal tissue
  • GSM5107802 TFE3-N-36 Renal tissue: Adjacent normal tissue
  • GSM5107804 TFE3-N-44 Renal tissue: Adjacent normal tissue
  • GSM5107805 TFE3-N-46 Renal tissue: Adjacent normal tissue
  • GSM5107808 TFE3-N-50 Renal tissue: Adjacent normal tissue
  • GSM5107809 TFE3-N-51 Renal tissue: Adjacent normal tissue
  • GSM5107810 TFE3-N-53 Renal tissue: Adjacent normal tissue
  • GSM5107812 TFE3-N-59 Renal tissue: Adjacent normal tissue
  • GSM5107814 TFE3-N-67 Renal tissue: Adjacent normal tissue
  • GSM5508078 TFE3-N-26 Renal tissue: Adjacent normal tissue

Score Breakdown

50%

relevance

  • Organism normalized.
  • Assay type normalized.
0%

comparison suitability

  • Tumor and normal sample groups detected.
  • No excluded sample type flags detected.
  • Matched tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
  • Patient tissue or biopsy specimens boosted for tissue comparison triage.
  • Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
70%

metadata quality

  • Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
  • Group clarity: Rule-based grouping found both case and control samples.
  • Disease clarity: Disease or condition metadata was not normalized.
  • Tissue clarity: Tissue metadata was not normalized.
  • Treatment clarity: No unclear treatment split detected in the sample metadata.
  • Replicate clarity: No pooled sample or technical replicate flags detected.
  • Data availability clarity: Dataset-level processed or raw data availability is explicit.
100%

data availability

  • Processed data available.
  • Raw data available.
34%

overall

  • Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
  • Overall score capped because comparison suitability is weak for the selected search intent.
  • Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Sample Links

77 samples

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.