Siftome Phase 3L

GSE221107

The landscape of enhancer transcription in prostate cancer [RNA-Seq]

Not suitable Dataset does not meet the current suitability threshold.

Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset

Source: GEO
Search intent: Patient tissue tumor-vs-normal
Intent behavior: search-intent-behavior-v1
Submission date: 2022-12-15
Last update: 2026-02-10
Organization: Department of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology
Department: Not available
Public date: 2025-02-09
Experiment types: Expression profiling by high throughput sequencing
Platforms: GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Series type: SubSeries
SubSeries: Not available
BioProject: PRJNA912767
Supplementary files: CSV: GSE221107_RNA-seq_raw_counts.csv.gz
Organism: Homo sapiens
Assay: bulk RNA-seq
Samples: 40
Study design: Tumor vs unmatched normal
Specimen/source: Tissue
Scoring version: intent-aware-scoring-v15
Ranking batch: b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created: 2026-06-05T20:20:27.088676Z
Warning version: intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism: Homo sapiens
Assay: bulk RNA-seq
Specimen/source: patient tissue or biopsy
Controls: matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters: Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules: missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps: non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts: microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs unmatched normal Tissue

Tumor samples and normal/healthy controls detected.
Tissue-like source terms detected.
Case metadata contains tumor or disease terms.
Control metadata contains normal or healthy-control terms.

Analysis Readiness

Ready after review

100% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

10/10 pts

No dataset warnings are present.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

No readiness blockers detected.

Next Steps

Review the sample grouping CSV and contrast CSV before running differential expression.
Confirm processed count files and sample identifiers match the exported metadata.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Standard analyst review

Proceed only after the analyst confirms grouping, exclusions, and source files.

No expert-review triggers were detected by Siftome.

Why This Is Ranked Here

Patient tissue tumor-vs-normal

Not suitable Dataset does not meet the current suitability threshold.

Score Components

relevance 100% Disease or condition metadata normalized. Organism normalized. Assay type normalized. Tissue metadata normalized.
comparison suitability 0% Case and control sample groups detected: prostate cancer vs normal tissue. No excluded sample type flags detected. Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
metadata quality 100% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
data availability 100% Processed data available. Raw data available.
overall 34% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Derived Classifications

Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
Study design Tumor vs unmatched normal Study design remains rule-derived: Tumor vs unmatched normal.
Specimen/source Tissue Specimen/source remains rule-derived: Tissue.
Likely case group prostate cancer 20 samples
Likely control group normal tissue 20 samples

Warnings

No ranking warnings are active.

Intent Interpretation

Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
Specimen assumption patient tissue or biopsy Derived specimen/source is Tissue.
Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs unmatched normal; likely groups are prostate cancer vs normal tissue.
Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Warning rules 0 active warnings missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Downgrade or exclusion reason Downgraded disease context: not a colorectal/GI cancer cohort. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

Recommendation Not suitable Dataset does not meet the current suitability threshold.
Supporting fact Tumor vs unmatched normal · Tissue · suitability 0%. Contributed to match or upgrade evidence.
Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
Supporting fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to match or upgrade evidence.
Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
Caution fact Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because tumor/normal grouping is from a non-colorectal cancer context. Contributed to downgrade or manual-review evidence.
Caution fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to downgrade or manual-review evidence.
Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

No active manual corrections are applied to this dataset.

Organism · Normalization rules Organism remains rule-derived: Homo sapiens.
Assay · Normalization rules Assay remains rule-derived: bulk RNA-seq.
Study design · Classifier and grouping rules Study design remains rule-derived: Tumor vs unmatched normal.
Specimen/source · Normalization rules Specimen/source remains rule-derived: Tissue.

Dataset organism

Dataset field · Organism · Global correction

Wrong organism

Current derived value

Homo sapiens

Raw GEO organism

dataset_accession: GSE221107
organism: Homo sapiens
dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq]

Dataset assay

Dataset field · Assay · Global correction

Wrong assay

Current derived value

bulk RNA-seq

Raw GEO assay metadata

assay_type: bulk RNA-seq
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq]

Study design

Dataset field · Study design · Global correction

Wrong study design

Current derived value

Tumor vs unmatched normal

Raw GEO study and sample metadata

dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq]
experiment_types: Expression profiling by high throughput sequencing
sample_context: GSM6845437: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 64
GSM6845438: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 76
GSM6845439: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 68
GSM6845440: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 62
GSM6845441: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 65
GSM6845442: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 74

Specimen/source type

Dataset field · Specimen/source · Global correction

Wrong specimen/source

Current derived value

Tissue

Raw GEO sample source metadata

dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq]
sample_context: GSM6845437: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 64
GSM6845438: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 76
GSM6845439: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 68
GSM6845440: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 62
GSM6845441: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 65
GSM6845442: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 74

Disease context

Dataset field · Disease context · Global correction

Wrong disease context

Current derived value

prostate cancer

Raw GEO disease context metadata

dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq]
sample_context: GSM6845437: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 64
GSM6845438: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 76
GSM6845439: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 68
GSM6845440: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 62
GSM6845441: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 65
GSM6845442: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 74

Intent exclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Exclude from intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE221107
dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq]
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM6845437: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 64
GSM6845438: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 76
GSM6845439: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 68
GSM6845440: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 62
GSM6845441: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 65
GSM6845442: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 74

Intent-only inclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Include only for intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE221107
dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq]
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM6845437: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 64
GSM6845438: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 76
GSM6845439: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 68
GSM6845440: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 62
GSM6845441: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 65
GSM6845442: source_name=prostate cancer; characteristics=tissue: prostate cancer; gender: male; age: 74

GSM6845437 grouping

Sample field · Grouping · Global correction · GSM6845437

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845437
sample_title: Prostate cancer tissues (PC1) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 64

GSM6845437 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845437

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845437
sample_title: Prostate cancer tissues (PC1) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 64

GSM6845438 grouping

Sample field · Grouping · Global correction · GSM6845438

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845438
sample_title: Prostate cancer tissues (PC2) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 76

GSM6845438 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845438

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845438
sample_title: Prostate cancer tissues (PC2) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 76

GSM6845439 grouping

Sample field · Grouping · Global correction · GSM6845439

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845439
sample_title: Prostate cancer tissues (PC3) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 68

GSM6845439 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845439

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845439
sample_title: Prostate cancer tissues (PC3) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 68

GSM6845440 grouping

Sample field · Grouping · Global correction · GSM6845440

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845440
sample_title: Prostate cancer tissues (PC4) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 62

GSM6845440 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845440

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845440
sample_title: Prostate cancer tissues (PC4) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 62

GSM6845441 grouping

Sample field · Grouping · Global correction · GSM6845441

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845441
sample_title: Prostate cancer tissues (PC5) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 65

GSM6845441 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845441

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845441
sample_title: Prostate cancer tissues (PC5) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 65

GSM6845442 grouping

Sample field · Grouping · Global correction · GSM6845442

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845442
sample_title: Prostate cancer tissues (PC6) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 74

GSM6845442 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845442

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845442
sample_title: Prostate cancer tissues (PC6) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 74

GSM6845443 grouping

Sample field · Grouping · Global correction · GSM6845443

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845443
sample_title: Prostate cancer tissues (PC7) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 75

GSM6845443 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845443

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845443
sample_title: Prostate cancer tissues (PC7) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 75

GSM6845444 grouping

Sample field · Grouping · Global correction · GSM6845444

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845444
sample_title: Prostate cancer tissues (PC8) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 67

GSM6845444 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845444

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845444
sample_title: Prostate cancer tissues (PC8) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 67

GSM6845445 grouping

Sample field · Grouping · Global correction · GSM6845445

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845445
sample_title: Prostate cancer tissues (PC9) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 62

GSM6845445 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845445

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845445
sample_title: Prostate cancer tissues (PC9) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 62

GSM6845446 grouping

Sample field · Grouping · Global correction · GSM6845446

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845446
sample_title: Prostate cancer tissues (PC10) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 73

GSM6845446 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845446

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845446
sample_title: Prostate cancer tissues (PC10) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 73

GSM6845447 grouping

Sample field · Grouping · Global correction · GSM6845447

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845447
sample_title: Prostate cancer tissues (PC11) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 63

GSM6845447 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845447

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845447
sample_title: Prostate cancer tissues (PC11) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 63

GSM6845448 grouping

Sample field · Grouping · Global correction · GSM6845448

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845448
sample_title: Prostate cancer tissues (PC12) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 66

GSM6845448 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845448

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845448
sample_title: Prostate cancer tissues (PC12) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 66

GSM6845449 grouping

Sample field · Grouping · Global correction · GSM6845449

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845449
sample_title: Prostate cancer tissues (PC13) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 65

GSM6845449 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845449

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845449
sample_title: Prostate cancer tissues (PC13) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 65

GSM6845450 grouping

Sample field · Grouping · Global correction · GSM6845450

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845450
sample_title: Prostate cancer tissues (PC14) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 68

GSM6845450 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845450

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845450
sample_title: Prostate cancer tissues (PC14) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 68

GSM6845451 grouping

Sample field · Grouping · Global correction · GSM6845451

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845451
sample_title: Prostate cancer tissues (PC15) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 64

GSM6845451 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845451

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845451
sample_title: Prostate cancer tissues (PC15) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 64

GSM6845452 grouping

Sample field · Grouping · Global correction · GSM6845452

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845452
sample_title: Prostate cancer tissues (PC16) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 70

GSM6845452 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845452

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845452
sample_title: Prostate cancer tissues (PC16) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 70

GSM6845453 grouping

Sample field · Grouping · Global correction · GSM6845453

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845453
sample_title: Prostate cancer tissues (PC17) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 63

GSM6845453 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845453

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845453
sample_title: Prostate cancer tissues (PC17) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 63

GSM6845454 grouping

Sample field · Grouping · Global correction · GSM6845454

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845454
sample_title: Prostate cancer tissues (PC18) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 77

GSM6845454 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845454

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845454
sample_title: Prostate cancer tissues (PC18) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 77

GSM6845455 grouping

Sample field · Grouping · Global correction · GSM6845455

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845455
sample_title: Prostate cancer tissues (PC19) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 76

GSM6845455 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845455

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845455
sample_title: Prostate cancer tissues (PC19) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 76

GSM6845456 grouping

Sample field · Grouping · Global correction · GSM6845456

Wrong grouping

Current derived value

prostate cancer (case)

Raw GEO sample metadata

sample_accession: GSM6845456
sample_title: Prostate cancer tissues (PC20) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 71

GSM6845456 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845456

Wrong sample exclusion

Current derived value

Included in derived sample grouping as prostate cancer

Raw GEO sample metadata

sample_accession: GSM6845456
sample_title: Prostate cancer tissues (PC20) [RNA-Seq]
source_name: prostate cancer
characteristics: tissue: prostate cancer; gender: male; age: 71

GSM6845457 grouping

Sample field · Grouping · Global correction · GSM6845457

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845457
sample_title: Prostate epithelial tissues (PN1) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 64

GSM6845457 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845457

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845457
sample_title: Prostate epithelial tissues (PN1) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 64

GSM6845458 grouping

Sample field · Grouping · Global correction · GSM6845458

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845458
sample_title: Prostate epithelial tissues (PN2) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 76

GSM6845458 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845458

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845458
sample_title: Prostate epithelial tissues (PN2) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 76

GSM6845459 grouping

Sample field · Grouping · Global correction · GSM6845459

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845459
sample_title: Prostate epithelial tissues (PN3) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 68

GSM6845459 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845459

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845459
sample_title: Prostate epithelial tissues (PN3) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 68

GSM6845460 grouping

Sample field · Grouping · Global correction · GSM6845460

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845460
sample_title: Prostate epithelial tissues (PN4) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 62

GSM6845460 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845460

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845460
sample_title: Prostate epithelial tissues (PN4) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 62

GSM6845461 grouping

Sample field · Grouping · Global correction · GSM6845461

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845461
sample_title: Prostate epithelial tissues (PN5) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 65

GSM6845461 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845461

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845461
sample_title: Prostate epithelial tissues (PN5) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 65

GSM6845462 grouping

Sample field · Grouping · Global correction · GSM6845462

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845462
sample_title: Prostate epithelial tissues (PN6) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 74

GSM6845462 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845462

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845462
sample_title: Prostate epithelial tissues (PN6) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 74

GSM6845463 grouping

Sample field · Grouping · Global correction · GSM6845463

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845463
sample_title: Prostate epithelial tissues (PN7) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 75

GSM6845463 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845463

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845463
sample_title: Prostate epithelial tissues (PN7) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 75

GSM6845464 grouping

Sample field · Grouping · Global correction · GSM6845464

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845464
sample_title: Prostate epithelial tissues (PN8) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 67

GSM6845464 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845464

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845464
sample_title: Prostate epithelial tissues (PN8) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 67

GSM6845465 grouping

Sample field · Grouping · Global correction · GSM6845465

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845465
sample_title: Prostate epithelial tissues (PN9) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 62

GSM6845465 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845465

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845465
sample_title: Prostate epithelial tissues (PN9) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 62

GSM6845466 grouping

Sample field · Grouping · Global correction · GSM6845466

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845466
sample_title: Prostate epithelial tissues (PN10) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 73

GSM6845466 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845466

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845466
sample_title: Prostate epithelial tissues (PN10) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 73

GSM6845467 grouping

Sample field · Grouping · Global correction · GSM6845467

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845467
sample_title: Prostate epithelial tissues (PN11) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 63

GSM6845467 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845467

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845467
sample_title: Prostate epithelial tissues (PN11) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 63

GSM6845468 grouping

Sample field · Grouping · Global correction · GSM6845468

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845468
sample_title: Prostate epithelial tissues (PN12) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 66

GSM6845468 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845468

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845468
sample_title: Prostate epithelial tissues (PN12) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 66

GSM6845469 grouping

Sample field · Grouping · Global correction · GSM6845469

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845469
sample_title: Prostate epithelial tissues (PN13) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 65

GSM6845469 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845469

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845469
sample_title: Prostate epithelial tissues (PN13) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 65

GSM6845470 grouping

Sample field · Grouping · Global correction · GSM6845470

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845470
sample_title: Prostate epithelial tissues (PN14) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 68

GSM6845470 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845470

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845470
sample_title: Prostate epithelial tissues (PN14) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 68

GSM6845471 grouping

Sample field · Grouping · Global correction · GSM6845471

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845471
sample_title: Prostate epithelial tissues (PN15) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 64

GSM6845471 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845471

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845471
sample_title: Prostate epithelial tissues (PN15) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 64

GSM6845472 grouping

Sample field · Grouping · Global correction · GSM6845472

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845472
sample_title: Prostate epithelial tissues (PN16) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 70

GSM6845472 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845472

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845472
sample_title: Prostate epithelial tissues (PN16) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 70

GSM6845473 grouping

Sample field · Grouping · Global correction · GSM6845473

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845473
sample_title: Prostate epithelial tissues (PN17) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 63

GSM6845473 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845473

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845473
sample_title: Prostate epithelial tissues (PN17) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 63

GSM6845474 grouping

Sample field · Grouping · Global correction · GSM6845474

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845474
sample_title: Prostate epithelial tissues (PN18) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 77

GSM6845474 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845474

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845474
sample_title: Prostate epithelial tissues (PN18) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 77

GSM6845475 grouping

Sample field · Grouping · Global correction · GSM6845475

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845475
sample_title: Prostate epithelial tissues (PN19) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 76

GSM6845475 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845475

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845475
sample_title: Prostate epithelial tissues (PN19) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 76

GSM6845476 grouping

Sample field · Grouping · Global correction · GSM6845476

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM6845476
sample_title: Prostate epithelial tissues (PN20) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 71

GSM6845476 exclusion decision

Sample field · Sample exclusion · Global correction · GSM6845476

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM6845476
sample_title: Prostate epithelial tissues (PN20) [RNA-Seq]
source_name: normal prostate
characteristics: tissue: normal prostate; gender: male; age: 71

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession: GSE221107
Sample records: 40 GSM samples

GEO has priority for original metadata under the Phase 3J source rules.
Processed data: available.
Raw data: available.
No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession: GSE221107

No recount3 project identifier has been imported for this dataset.
Once imported, recount3 has priority for processed count availability.
The recount3 source filter excludes this dataset until that linkage exists.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession: GSE221107

No Expression Atlas experiment identifier has been imported for this dataset.
Once imported, Expression Atlas has priority for curated expression experiment links.
The Expression Atlas source filter excludes this dataset until that linkage exists.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession: GSE221107

No PubMed identifier is present in the current runtime metadata.
No live PubMed search is performed from the dataset detail page.

Dataset Feedback

0 stored

No project feedback stored for this dataset.

Original GEO Metadata

dataset_accession: GSE221107
dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq]
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2022-12-15
last_update_date: 2026-02-10
organization_name: Department of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology
department: Not available
public_date: 2025-02-09
experiment_types: Expression profiling by high throughput sequencing
platforms: GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
sub_series: Not available
bioproject: PRJNA912767
supplementary_files: CSV: GSE221107_RNA-seq_raw_counts.csv.gz
series_type: SubSeries

Why It Matched

Tumor vs unmatched normal · Tissue · suitability 0%.
Prioritized assay: bulk RNA-seq is the active assay expectation.
Downgraded disease context: not a colorectal/GI cancer cohort.
Processed data is available for downstream review.

Why It May Not Be Suitable

Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.
Downgraded disease context: not a colorectal/GI cancer cohort.
Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

No warnings

Normalized Fields

84 fields

Field Value Source Origin Confidence Evidence Reason

assay_type bulk RNA-seq dataset GSE221107 Runtime Siftome inference GEO:dataset:GSE221107:49fb1b9f50f205d65c1973ba77c56b57d7f40daaf28548e514b0ae5187c67c1e high confidence bulk rna-seq dataset_accession: GSE221107 dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq] organism: Homo sapiens assay_type: bulk RNA-seq processed_data_a... keyword match keyword match: bulk rna-seq

disease prostate cancer dataset GSE221107 Runtime Siftome inference GEO:dataset:GSE221107:49fb1b9f50f205d65c1973ba77c56b57d7f40daaf28548e514b0ae5187c67c1e high confidence prostate cancer dataset_accession: GSE221107 dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq] organism: Homo sapiens assay_type: bulk RNA-seq processed_data_a... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845437 Runtime Siftome inference GEO:sample:GSM6845437:7e970998299ca102490b1e89410f846eaf87805c1486a13ed053fbd002bbc192 high confidence prostate cancer sample_accession: GSM6845437 sample_title: Prostate cancer tissues (PC1) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 64 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845438 Runtime Siftome inference GEO:sample:GSM6845438:d90b9e6fab3e3266d9c1c85d83ee4700a942f52effe5b59917060d2e7ed55337 high confidence prostate cancer sample_accession: GSM6845438 sample_title: Prostate cancer tissues (PC2) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 76 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845439 Runtime Siftome inference GEO:sample:GSM6845439:b9d18f255ba841ab2f258f30a8c4009a4907528b2305308b7cea36a7ed556f72 high confidence prostate cancer sample_accession: GSM6845439 sample_title: Prostate cancer tissues (PC3) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 68 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845440 Runtime Siftome inference GEO:sample:GSM6845440:21121a1c2140d112ca9a9ad41790913d90b7eb12c195d64a7cafd40f2c8c3e70 high confidence prostate cancer sample_accession: GSM6845440 sample_title: Prostate cancer tissues (PC4) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 62 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845441 Runtime Siftome inference GEO:sample:GSM6845441:d263e5922ecd6c19695e843a6d2bc75658db867e76d4efdb766c4cd991c3f089 high confidence prostate cancer sample_accession: GSM6845441 sample_title: Prostate cancer tissues (PC5) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 65 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845442 Runtime Siftome inference GEO:sample:GSM6845442:56052642222e41ed68aa19709bc0e58d976d13bcc978d7d530c2d64b8c310e35 high confidence prostate cancer sample_accession: GSM6845442 sample_title: Prostate cancer tissues (PC6) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 74 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845443 Runtime Siftome inference GEO:sample:GSM6845443:78d8668be0080cf33edbefcf4947c93b9dbab98da06f48d66eec8f01135e4b33 high confidence prostate cancer sample_accession: GSM6845443 sample_title: Prostate cancer tissues (PC7) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 75 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845444 Runtime Siftome inference GEO:sample:GSM6845444:069f7ccc4b6f8acca12414c7f0904a94c74bc31913fbdc10eaab96d16c466b88 high confidence prostate cancer sample_accession: GSM6845444 sample_title: Prostate cancer tissues (PC8) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 67 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845445 Runtime Siftome inference GEO:sample:GSM6845445:0baca96bab92aec9c5d3f83b84e58100c42970c41f01130de63c93759ac59d27 high confidence prostate cancer sample_accession: GSM6845445 sample_title: Prostate cancer tissues (PC9) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 62 P... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845446 Runtime Siftome inference GEO:sample:GSM6845446:64e6aa549caef0ad1477356f36fd97962199b4f55f69419df1ffa6353dc59a48 high confidence prostate cancer sample_accession: GSM6845446 sample_title: Prostate cancer tissues (PC10) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 73 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845447 Runtime Siftome inference GEO:sample:GSM6845447:f935207b203c2065500f2198e638f8cb79167763fa0ec8feb915f02b47733d80 high confidence prostate cancer sample_accession: GSM6845447 sample_title: Prostate cancer tissues (PC11) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 63 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845448 Runtime Siftome inference GEO:sample:GSM6845448:730eeb5b8bb0bd165e5a81fd707eaa3105d69f99bb8889d1cc7e3377ab2358b7 high confidence prostate cancer sample_accession: GSM6845448 sample_title: Prostate cancer tissues (PC12) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 66 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845449 Runtime Siftome inference GEO:sample:GSM6845449:1c57fe5737b99ec83d49612ec399ac89bf29dfdd4212147a39ac9285d0d1f3ba high confidence prostate cancer sample_accession: GSM6845449 sample_title: Prostate cancer tissues (PC13) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 65 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845450 Runtime Siftome inference GEO:sample:GSM6845450:aa01bb0342ce046ec86273f4f5719e56b90b67c8409d3e2dd78b720aa441e829 high confidence prostate cancer sample_accession: GSM6845450 sample_title: Prostate cancer tissues (PC14) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 68 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845451 Runtime Siftome inference GEO:sample:GSM6845451:22d0c6532ed6e74fac9c8c292390c4673a4be73e795662bf88525b395edda316 high confidence prostate cancer sample_accession: GSM6845451 sample_title: Prostate cancer tissues (PC15) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 64 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845452 Runtime Siftome inference GEO:sample:GSM6845452:d8898dd2065ece2cee096bb1454c8c90c61491f4252145bee2b01a568277732c high confidence prostate cancer sample_accession: GSM6845452 sample_title: Prostate cancer tissues (PC16) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 70 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845453 Runtime Siftome inference GEO:sample:GSM6845453:3f24be55e4754c01285dcd333a45ba751b39740f1897b15a6335fe52f415fd30 high confidence prostate cancer sample_accession: GSM6845453 sample_title: Prostate cancer tissues (PC17) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 63 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845454 Runtime Siftome inference GEO:sample:GSM6845454:89b5efe8b2d85246473200c86785e411a53bf439e481c855400da6eae8413cf8 high confidence prostate cancer sample_accession: GSM6845454 sample_title: Prostate cancer tissues (PC18) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 77 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845455 Runtime Siftome inference GEO:sample:GSM6845455:ab79d99c060b3977f4dc40eaa92cbec4e4a2dec06e68ebfb09694c79f92fb0d0 high confidence prostate cancer sample_accession: GSM6845455 sample_title: Prostate cancer tissues (PC19) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 76 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

disease prostate cancer sample GSM6845456 Runtime Siftome inference GEO:sample:GSM6845456:5ce3fdaf5acd9e47c7d092735fe3bc7a52227cc003a068a454e307be6eacae28 high confidence prostate cancer sample_accession: GSM6845456 sample_title: Prostate cancer tissues (PC20) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 71 ... controlled vocabulary controlled vocabulary disease match: prostate cancer

organism Homo sapiens dataset GSE221107 Runtime Siftome inference GEO:dataset:GSE221107:49fb1b9f50f205d65c1973ba77c56b57d7f40daaf28548e514b0ae5187c67c1e high confidence homo sapiens dataset_accession: GSE221107 dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq] organism: Homo sapiens assay_type: bulk RNA-seq processed_data_a... keyword match keyword match: homo sapiens

sample_type normal tissue sample GSM6845457 Runtime Siftome inference GEO:sample:GSM6845457:2e7ca385dc05b79f7a42b62aa644b65e4f846812e9356de8a3541f06ef5cbc1f low confidence normal sample_accession: GSM6845457 sample_title: Prostate epithelial tissues (PN1) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845458 Runtime Siftome inference GEO:sample:GSM6845458:b43faa94fea4a01e6be198cbaadf3801681c1065f7cbdfcf9db37c6b984a87d3 low confidence normal sample_accession: GSM6845458 sample_title: Prostate epithelial tissues (PN2) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845459 Runtime Siftome inference GEO:sample:GSM6845459:9cce02216df9edb081cc1c2eda81a37ade65b188c580a5b5eb362cac8e3aa4da low confidence normal sample_accession: GSM6845459 sample_title: Prostate epithelial tissues (PN3) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845460 Runtime Siftome inference GEO:sample:GSM6845460:e44d5e869456c7e1f4e1b2d7af99bdcb2e4531c1f633806cb3cf27c42b4362d2 low confidence normal sample_accession: GSM6845460 sample_title: Prostate epithelial tissues (PN4) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845461 Runtime Siftome inference GEO:sample:GSM6845461:6a2576839732eb871baf1a805768431739b3916a5857bf756fb644091c0980de low confidence normal sample_accession: GSM6845461 sample_title: Prostate epithelial tissues (PN5) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845462 Runtime Siftome inference GEO:sample:GSM6845462:a956484d2f0c50f72c6732d7b6d79ee3ba374eb54b0623e03a675af6669e0072 low confidence normal sample_accession: GSM6845462 sample_title: Prostate epithelial tissues (PN6) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845463 Runtime Siftome inference GEO:sample:GSM6845463:c21b3488eef10cb2b244f9dab7b851395f4843e0a50005ab74c4151b05b77c2c low confidence normal sample_accession: GSM6845463 sample_title: Prostate epithelial tissues (PN7) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845464 Runtime Siftome inference GEO:sample:GSM6845464:7d32235c093484f27420da453095548e1193bed74b7e2741d87870c0566599f1 low confidence normal sample_accession: GSM6845464 sample_title: Prostate epithelial tissues (PN8) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845465 Runtime Siftome inference GEO:sample:GSM6845465:e2849442e6cfc995d764cd2239f88f75002d9c80f78d84182020a7d9c5002262 low confidence normal sample_accession: GSM6845465 sample_title: Prostate epithelial tissues (PN9) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845466 Runtime Siftome inference GEO:sample:GSM6845466:854ac6ca0b8420daa0b20c70d272255a61b769eb28199098c574ca1b9ef85c6f low confidence normal sample_accession: GSM6845466 sample_title: Prostate epithelial tissues (PN10) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845467 Runtime Siftome inference GEO:sample:GSM6845467:78a19b7db8f75361057b269180829a5085926607a0499598ceb76fcc40d4613c low confidence normal sample_accession: GSM6845467 sample_title: Prostate epithelial tissues (PN11) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845468 Runtime Siftome inference GEO:sample:GSM6845468:eef3310ef148e837eb660ee340a9ffb20af6cbf331ccc5027aad9551535bcc2c low confidence normal sample_accession: GSM6845468 sample_title: Prostate epithelial tissues (PN12) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845469 Runtime Siftome inference GEO:sample:GSM6845469:90bf814d3a7f84567109d829c2dcdcba214990f07995b7a867ae8b157f2b353b low confidence normal sample_accession: GSM6845469 sample_title: Prostate epithelial tissues (PN13) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845470 Runtime Siftome inference GEO:sample:GSM6845470:7e595bdd8b8f27bfbecb538e48f253d96ec1a638e9283a58b84b80734283ddd3 low confidence normal sample_accession: GSM6845470 sample_title: Prostate epithelial tissues (PN14) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845471 Runtime Siftome inference GEO:sample:GSM6845471:b59516266cc65b590ca13e1508fd1acfd898349bbfbc5e85a02527668609637f low confidence normal sample_accession: GSM6845471 sample_title: Prostate epithelial tissues (PN15) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845472 Runtime Siftome inference GEO:sample:GSM6845472:df088176876d9d3542f288f50fbf0c9381ad64bc16a016f08923a18b2ddd3691 low confidence normal sample_accession: GSM6845472 sample_title: Prostate epithelial tissues (PN16) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845473 Runtime Siftome inference GEO:sample:GSM6845473:1118c74f15d65bb5bfe5b4b23149defb6dfacbfabde314ab3419843518c49342 low confidence normal sample_accession: GSM6845473 sample_title: Prostate epithelial tissues (PN17) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845474 Runtime Siftome inference GEO:sample:GSM6845474:90176fdf912ea80de11f731d411521eb427627e617f3fe0686e35008ab0aecda low confidence normal sample_accession: GSM6845474 sample_title: Prostate epithelial tissues (PN18) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845475 Runtime Siftome inference GEO:sample:GSM6845475:d16be3c3438e4303e3432ad1f79ba58de7874e3d76222c16d56085a00f646a6c low confidence normal sample_accession: GSM6845475 sample_title: Prostate epithelial tissues (PN19) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

sample_type normal tissue sample GSM6845476 Runtime Siftome inference GEO:sample:GSM6845476:8391d5225430acf717621de535af0d387223d2b0550a194d3a4b35d5be282a03 low confidence normal sample_accession: GSM6845476 sample_title: Prostate epithelial tissues (PN20) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary sample type match: normal

tissue prostate dataset GSE221107 Runtime Siftome inference GEO:dataset:GSE221107:49fb1b9f50f205d65c1973ba77c56b57d7f40daaf28548e514b0ae5187c67c1e low confidence prostate dataset_accession: GSE221107 dataset_title: The landscape of enhancer transcription in prostate cancer [RNA-Seq] organism: Homo sapiens assay_type: bulk RNA-seq processed_data_a... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845437 Runtime Siftome inference GEO:sample:GSM6845437:7e970998299ca102490b1e89410f846eaf87805c1486a13ed053fbd002bbc192 low confidence prostate sample_accession: GSM6845437 sample_title: Prostate cancer tissues (PC1) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 64 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845438 Runtime Siftome inference GEO:sample:GSM6845438:d90b9e6fab3e3266d9c1c85d83ee4700a942f52effe5b59917060d2e7ed55337 low confidence prostate sample_accession: GSM6845438 sample_title: Prostate cancer tissues (PC2) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 76 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845439 Runtime Siftome inference GEO:sample:GSM6845439:b9d18f255ba841ab2f258f30a8c4009a4907528b2305308b7cea36a7ed556f72 low confidence prostate sample_accession: GSM6845439 sample_title: Prostate cancer tissues (PC3) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 68 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845440 Runtime Siftome inference GEO:sample:GSM6845440:21121a1c2140d112ca9a9ad41790913d90b7eb12c195d64a7cafd40f2c8c3e70 low confidence prostate sample_accession: GSM6845440 sample_title: Prostate cancer tissues (PC4) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 62 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845441 Runtime Siftome inference GEO:sample:GSM6845441:d263e5922ecd6c19695e843a6d2bc75658db867e76d4efdb766c4cd991c3f089 low confidence prostate sample_accession: GSM6845441 sample_title: Prostate cancer tissues (PC5) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 65 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845442 Runtime Siftome inference GEO:sample:GSM6845442:56052642222e41ed68aa19709bc0e58d976d13bcc978d7d530c2d64b8c310e35 low confidence prostate sample_accession: GSM6845442 sample_title: Prostate cancer tissues (PC6) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 74 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845443 Runtime Siftome inference GEO:sample:GSM6845443:78d8668be0080cf33edbefcf4947c93b9dbab98da06f48d66eec8f01135e4b33 low confidence prostate sample_accession: GSM6845443 sample_title: Prostate cancer tissues (PC7) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 75 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845444 Runtime Siftome inference GEO:sample:GSM6845444:069f7ccc4b6f8acca12414c7f0904a94c74bc31913fbdc10eaab96d16c466b88 low confidence prostate sample_accession: GSM6845444 sample_title: Prostate cancer tissues (PC8) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 67 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845445 Runtime Siftome inference GEO:sample:GSM6845445:0baca96bab92aec9c5d3f83b84e58100c42970c41f01130de63c93759ac59d27 low confidence prostate sample_accession: GSM6845445 sample_title: Prostate cancer tissues (PC9) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 62 P... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845446 Runtime Siftome inference GEO:sample:GSM6845446:64e6aa549caef0ad1477356f36fd97962199b4f55f69419df1ffa6353dc59a48 low confidence prostate sample_accession: GSM6845446 sample_title: Prostate cancer tissues (PC10) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 73 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845447 Runtime Siftome inference GEO:sample:GSM6845447:f935207b203c2065500f2198e638f8cb79167763fa0ec8feb915f02b47733d80 low confidence prostate sample_accession: GSM6845447 sample_title: Prostate cancer tissues (PC11) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 63 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845448 Runtime Siftome inference GEO:sample:GSM6845448:730eeb5b8bb0bd165e5a81fd707eaa3105d69f99bb8889d1cc7e3377ab2358b7 low confidence prostate sample_accession: GSM6845448 sample_title: Prostate cancer tissues (PC12) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 66 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845449 Runtime Siftome inference GEO:sample:GSM6845449:1c57fe5737b99ec83d49612ec399ac89bf29dfdd4212147a39ac9285d0d1f3ba low confidence prostate sample_accession: GSM6845449 sample_title: Prostate cancer tissues (PC13) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 65 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845450 Runtime Siftome inference GEO:sample:GSM6845450:aa01bb0342ce046ec86273f4f5719e56b90b67c8409d3e2dd78b720aa441e829 low confidence prostate sample_accession: GSM6845450 sample_title: Prostate cancer tissues (PC14) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 68 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845451 Runtime Siftome inference GEO:sample:GSM6845451:22d0c6532ed6e74fac9c8c292390c4673a4be73e795662bf88525b395edda316 low confidence prostate sample_accession: GSM6845451 sample_title: Prostate cancer tissues (PC15) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 64 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845452 Runtime Siftome inference GEO:sample:GSM6845452:d8898dd2065ece2cee096bb1454c8c90c61491f4252145bee2b01a568277732c low confidence prostate sample_accession: GSM6845452 sample_title: Prostate cancer tissues (PC16) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 70 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845453 Runtime Siftome inference GEO:sample:GSM6845453:3f24be55e4754c01285dcd333a45ba751b39740f1897b15a6335fe52f415fd30 low confidence prostate sample_accession: GSM6845453 sample_title: Prostate cancer tissues (PC17) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 63 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845454 Runtime Siftome inference GEO:sample:GSM6845454:89b5efe8b2d85246473200c86785e411a53bf439e481c855400da6eae8413cf8 low confidence prostate sample_accession: GSM6845454 sample_title: Prostate cancer tissues (PC18) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 77 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845455 Runtime Siftome inference GEO:sample:GSM6845455:ab79d99c060b3977f4dc40eaa92cbec4e4a2dec06e68ebfb09694c79f92fb0d0 low confidence prostate sample_accession: GSM6845455 sample_title: Prostate cancer tissues (PC19) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 76 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845456 Runtime Siftome inference GEO:sample:GSM6845456:5ce3fdaf5acd9e47c7d092735fe3bc7a52227cc003a068a454e307be6eacae28 low confidence prostate sample_accession: GSM6845456 sample_title: Prostate cancer tissues (PC20) [RNA-Seq] source_name: prostate cancer characteristics: tissue: prostate cancer; gender: male; age: 71 ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845457 Runtime Siftome inference GEO:sample:GSM6845457:2e7ca385dc05b79f7a42b62aa644b65e4f846812e9356de8a3541f06ef5cbc1f low confidence prostate sample_accession: GSM6845457 sample_title: Prostate epithelial tissues (PN1) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845458 Runtime Siftome inference GEO:sample:GSM6845458:b43faa94fea4a01e6be198cbaadf3801681c1065f7cbdfcf9db37c6b984a87d3 low confidence prostate sample_accession: GSM6845458 sample_title: Prostate epithelial tissues (PN2) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845459 Runtime Siftome inference GEO:sample:GSM6845459:9cce02216df9edb081cc1c2eda81a37ade65b188c580a5b5eb362cac8e3aa4da low confidence prostate sample_accession: GSM6845459 sample_title: Prostate epithelial tissues (PN3) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845460 Runtime Siftome inference GEO:sample:GSM6845460:e44d5e869456c7e1f4e1b2d7af99bdcb2e4531c1f633806cb3cf27c42b4362d2 low confidence prostate sample_accession: GSM6845460 sample_title: Prostate epithelial tissues (PN4) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845461 Runtime Siftome inference GEO:sample:GSM6845461:6a2576839732eb871baf1a805768431739b3916a5857bf756fb644091c0980de low confidence prostate sample_accession: GSM6845461 sample_title: Prostate epithelial tissues (PN5) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845462 Runtime Siftome inference GEO:sample:GSM6845462:a956484d2f0c50f72c6732d7b6d79ee3ba374eb54b0623e03a675af6669e0072 low confidence prostate sample_accession: GSM6845462 sample_title: Prostate epithelial tissues (PN6) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845463 Runtime Siftome inference GEO:sample:GSM6845463:c21b3488eef10cb2b244f9dab7b851395f4843e0a50005ab74c4151b05b77c2c low confidence prostate sample_accession: GSM6845463 sample_title: Prostate epithelial tissues (PN7) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845464 Runtime Siftome inference GEO:sample:GSM6845464:7d32235c093484f27420da453095548e1193bed74b7e2741d87870c0566599f1 low confidence prostate sample_accession: GSM6845464 sample_title: Prostate epithelial tissues (PN8) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845465 Runtime Siftome inference GEO:sample:GSM6845465:e2849442e6cfc995d764cd2239f88f75002d9c80f78d84182020a7d9c5002262 low confidence prostate sample_accession: GSM6845465 sample_title: Prostate epithelial tissues (PN9) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age: ... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845466 Runtime Siftome inference GEO:sample:GSM6845466:854ac6ca0b8420daa0b20c70d272255a61b769eb28199098c574ca1b9ef85c6f low confidence prostate sample_accession: GSM6845466 sample_title: Prostate epithelial tissues (PN10) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845467 Runtime Siftome inference GEO:sample:GSM6845467:78a19b7db8f75361057b269180829a5085926607a0499598ceb76fcc40d4613c low confidence prostate sample_accession: GSM6845467 sample_title: Prostate epithelial tissues (PN11) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845468 Runtime Siftome inference GEO:sample:GSM6845468:eef3310ef148e837eb660ee340a9ffb20af6cbf331ccc5027aad9551535bcc2c low confidence prostate sample_accession: GSM6845468 sample_title: Prostate epithelial tissues (PN12) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845469 Runtime Siftome inference GEO:sample:GSM6845469:90bf814d3a7f84567109d829c2dcdcba214990f07995b7a867ae8b157f2b353b low confidence prostate sample_accession: GSM6845469 sample_title: Prostate epithelial tissues (PN13) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845470 Runtime Siftome inference GEO:sample:GSM6845470:7e595bdd8b8f27bfbecb538e48f253d96ec1a638e9283a58b84b80734283ddd3 low confidence prostate sample_accession: GSM6845470 sample_title: Prostate epithelial tissues (PN14) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845471 Runtime Siftome inference GEO:sample:GSM6845471:b59516266cc65b590ca13e1508fd1acfd898349bbfbc5e85a02527668609637f low confidence prostate sample_accession: GSM6845471 sample_title: Prostate epithelial tissues (PN15) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845472 Runtime Siftome inference GEO:sample:GSM6845472:df088176876d9d3542f288f50fbf0c9381ad64bc16a016f08923a18b2ddd3691 low confidence prostate sample_accession: GSM6845472 sample_title: Prostate epithelial tissues (PN16) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845473 Runtime Siftome inference GEO:sample:GSM6845473:1118c74f15d65bb5bfe5b4b23149defb6dfacbfabde314ab3419843518c49342 low confidence prostate sample_accession: GSM6845473 sample_title: Prostate epithelial tissues (PN17) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845474 Runtime Siftome inference GEO:sample:GSM6845474:90176fdf912ea80de11f731d411521eb427627e617f3fe0686e35008ab0aecda low confidence prostate sample_accession: GSM6845474 sample_title: Prostate epithelial tissues (PN18) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845475 Runtime Siftome inference GEO:sample:GSM6845475:d16be3c3438e4303e3432ad1f79ba58de7874e3d76222c16d56085a00f646a6c low confidence prostate sample_accession: GSM6845475 sample_title: Prostate epithelial tissues (PN19) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

tissue prostate sample GSM6845476 Runtime Siftome inference GEO:sample:GSM6845476:8391d5225430acf717621de535af0d387223d2b0550a194d3a4b35d5be282a03 low confidence prostate sample_accession: GSM6845476 sample_title: Prostate epithelial tissues (PN20) [RNA-Seq] source_name: normal prostate characteristics: tissue: normal prostate; gender: male; age:... controlled vocabulary controlled vocabulary tissue match: prostate

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

20

GSM6845437 Prostate cancer tissues (PC1) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 64
GSM6845438 Prostate cancer tissues (PC2) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 76
GSM6845439 Prostate cancer tissues (PC3) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 68
GSM6845440 Prostate cancer tissues (PC4) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 62
GSM6845441 Prostate cancer tissues (PC5) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 65
GSM6845442 Prostate cancer tissues (PC6) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 74
GSM6845443 Prostate cancer tissues (PC7) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 75
GSM6845444 Prostate cancer tissues (PC8) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 67
GSM6845445 Prostate cancer tissues (PC9) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 62
GSM6845446 Prostate cancer tissues (PC10) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 73
GSM6845447 Prostate cancer tissues (PC11) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 63
GSM6845448 Prostate cancer tissues (PC12) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 66
GSM6845449 Prostate cancer tissues (PC13) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 65
GSM6845450 Prostate cancer tissues (PC14) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 68
GSM6845451 Prostate cancer tissues (PC15) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 64
GSM6845452 Prostate cancer tissues (PC16) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 70
GSM6845453 Prostate cancer tissues (PC17) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 63
GSM6845454 Prostate cancer tissues (PC18) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 77
GSM6845455 Prostate cancer tissues (PC19) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 76
GSM6845456 Prostate cancer tissues (PC20) [RNA-Seq] prostate cancer Case marker detected. prostate cancer tissue: prostate cancer; gender: male; age: 71

Possible control samples

Samples currently treated as controls or baseline.

20

GSM6845457 Prostate epithelial tissues (PN1) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 64
GSM6845458 Prostate epithelial tissues (PN2) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 76
GSM6845459 Prostate epithelial tissues (PN3) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 68
GSM6845460 Prostate epithelial tissues (PN4) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 62
GSM6845461 Prostate epithelial tissues (PN5) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 65
GSM6845462 Prostate epithelial tissues (PN6) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 74
GSM6845463 Prostate epithelial tissues (PN7) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 75
GSM6845464 Prostate epithelial tissues (PN8) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 67
GSM6845465 Prostate epithelial tissues (PN9) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 62
GSM6845466 Prostate epithelial tissues (PN10) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 73
GSM6845467 Prostate epithelial tissues (PN11) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 63
GSM6845468 Prostate epithelial tissues (PN12) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 66
GSM6845469 Prostate epithelial tissues (PN13) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 65
GSM6845470 Prostate epithelial tissues (PN14) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 68
GSM6845471 Prostate epithelial tissues (PN15) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 64
GSM6845472 Prostate epithelial tissues (PN16) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 70
GSM6845473 Prostate epithelial tissues (PN17) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 63
GSM6845474 Prostate epithelial tissues (PN18) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 77
GSM6845475 Prostate epithelial tissues (PN19) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 76
GSM6845476 Prostate epithelial tissues (PN20) [RNA-Seq] normal tissue Control marker detected. normal prostate tissue: normal prostate; gender: male; age: 71

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

100 pts

Clarity: 100%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

prostate cancer

20 samples

GSM6845437 Prostate cancer tissues (PC1) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 64
GSM6845438 Prostate cancer tissues (PC2) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 76
GSM6845439 Prostate cancer tissues (PC3) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 68
GSM6845440 Prostate cancer tissues (PC4) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 62
GSM6845441 Prostate cancer tissues (PC5) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 65
GSM6845442 Prostate cancer tissues (PC6) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 74
GSM6845443 Prostate cancer tissues (PC7) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 75
GSM6845444 Prostate cancer tissues (PC8) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 67
GSM6845445 Prostate cancer tissues (PC9) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 62
GSM6845446 Prostate cancer tissues (PC10) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 73
GSM6845447 Prostate cancer tissues (PC11) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 63
GSM6845448 Prostate cancer tissues (PC12) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 66
GSM6845449 Prostate cancer tissues (PC13) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 65
GSM6845450 Prostate cancer tissues (PC14) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 68
GSM6845451 Prostate cancer tissues (PC15) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 64
GSM6845452 Prostate cancer tissues (PC16) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 70
GSM6845453 Prostate cancer tissues (PC17) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 63
GSM6845454 Prostate cancer tissues (PC18) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 77
GSM6845455 Prostate cancer tissues (PC19) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 76
GSM6845456 Prostate cancer tissues (PC20) [RNA-Seq] prostate cancer tissue: prostate cancer; gender: male; age: 71

normal tissue

20 samples

GSM6845457 Prostate epithelial tissues (PN1) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 64
GSM6845458 Prostate epithelial tissues (PN2) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 76
GSM6845459 Prostate epithelial tissues (PN3) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 68
GSM6845460 Prostate epithelial tissues (PN4) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 62
GSM6845461 Prostate epithelial tissues (PN5) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 65
GSM6845462 Prostate epithelial tissues (PN6) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 74
GSM6845463 Prostate epithelial tissues (PN7) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 75
GSM6845464 Prostate epithelial tissues (PN8) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 67
GSM6845465 Prostate epithelial tissues (PN9) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 62
GSM6845466 Prostate epithelial tissues (PN10) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 73
GSM6845467 Prostate epithelial tissues (PN11) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 63
GSM6845468 Prostate epithelial tissues (PN12) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 66
GSM6845469 Prostate epithelial tissues (PN13) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 65
GSM6845470 Prostate epithelial tissues (PN14) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 68
GSM6845471 Prostate epithelial tissues (PN15) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 64
GSM6845472 Prostate epithelial tissues (PN16) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 70
GSM6845473 Prostate epithelial tissues (PN17) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 63
GSM6845474 Prostate epithelial tissues (PN18) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 77
GSM6845475 Prostate epithelial tissues (PN19) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 76
GSM6845476 Prostate epithelial tissues (PN20) [RNA-Seq] normal prostate tissue: normal prostate; gender: male; age: 71

Score Breakdown

100%

relevance

Disease or condition metadata normalized.
Organism normalized.
Assay type normalized.
Tissue metadata normalized.

0%

comparison suitability

Case and control sample groups detected: prostate cancer vs normal tissue.
No excluded sample type flags detected.
Tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
Patient tissue or biopsy specimens boosted for tissue comparison triage.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.

100%

metadata quality

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
Group clarity: Rule-based grouping found both case and control samples.
Disease clarity: Disease or condition metadata normalized.
Tissue clarity: Tissue metadata normalized.
Treatment clarity: No unclear treatment split detected in the sample metadata.
Replicate clarity: No pooled sample or technical replicate flags detected.
Data availability clarity: Dataset-level processed or raw data availability is explicit.

100%

data availability

Processed data available.
Raw data available.

34%

overall

Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Sample Links

40 samples

GSM6845437 Prostate cancer tissues (PC1) [RNA-Seq]
GSM6845438 Prostate cancer tissues (PC2) [RNA-Seq]
GSM6845439 Prostate cancer tissues (PC3) [RNA-Seq]
GSM6845440 Prostate cancer tissues (PC4) [RNA-Seq]
GSM6845441 Prostate cancer tissues (PC5) [RNA-Seq]
GSM6845442 Prostate cancer tissues (PC6) [RNA-Seq]
GSM6845443 Prostate cancer tissues (PC7) [RNA-Seq]
GSM6845444 Prostate cancer tissues (PC8) [RNA-Seq]
GSM6845445 Prostate cancer tissues (PC9) [RNA-Seq]
GSM6845446 Prostate cancer tissues (PC10) [RNA-Seq]
GSM6845447 Prostate cancer tissues (PC11) [RNA-Seq]
GSM6845448 Prostate cancer tissues (PC12) [RNA-Seq]
GSM6845449 Prostate cancer tissues (PC13) [RNA-Seq]
GSM6845450 Prostate cancer tissues (PC14) [RNA-Seq]
GSM6845451 Prostate cancer tissues (PC15) [RNA-Seq]
GSM6845452 Prostate cancer tissues (PC16) [RNA-Seq]
GSM6845453 Prostate cancer tissues (PC17) [RNA-Seq]
GSM6845454 Prostate cancer tissues (PC18) [RNA-Seq]
GSM6845455 Prostate cancer tissues (PC19) [RNA-Seq]
GSM6845456 Prostate cancer tissues (PC20) [RNA-Seq]
GSM6845457 Prostate epithelial tissues (PN1) [RNA-Seq]
GSM6845458 Prostate epithelial tissues (PN2) [RNA-Seq]
GSM6845459 Prostate epithelial tissues (PN3) [RNA-Seq]
GSM6845460 Prostate epithelial tissues (PN4) [RNA-Seq]
GSM6845461 Prostate epithelial tissues (PN5) [RNA-Seq]
GSM6845462 Prostate epithelial tissues (PN6) [RNA-Seq]
GSM6845463 Prostate epithelial tissues (PN7) [RNA-Seq]
GSM6845464 Prostate epithelial tissues (PN8) [RNA-Seq]
GSM6845465 Prostate epithelial tissues (PN9) [RNA-Seq]
GSM6845466 Prostate epithelial tissues (PN10) [RNA-Seq]
GSM6845467 Prostate epithelial tissues (PN11) [RNA-Seq]
GSM6845468 Prostate epithelial tissues (PN12) [RNA-Seq]
GSM6845469 Prostate epithelial tissues (PN13) [RNA-Seq]
GSM6845470 Prostate epithelial tissues (PN14) [RNA-Seq]
GSM6845471 Prostate epithelial tissues (PN15) [RNA-Seq]
GSM6845472 Prostate epithelial tissues (PN16) [RNA-Seq]
GSM6845473 Prostate epithelial tissues (PN17) [RNA-Seq]
GSM6845474 Prostate epithelial tissues (PN18) [RNA-Seq]
GSM6845475 Prostate epithelial tissues (PN19) [RNA-Seq]
GSM6845476 Prostate epithelial tissues (PN20) [RNA-Seq]

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.