Siftome Phase 3L

GSE40049

Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing

Not suitable Dataset does not meet the current suitability threshold.

Sample grouping CSV Contrast CSV DESeq2 metadata CSV R handoff notes Handoff report Download instructions Open GEO dataset

Source: GEO
Search intent: Patient tissue tumor-vs-normal
Intent behavior: search-intent-behavior-v1
Submission date: 2012-08-10
Last update: 2019-05-15
Organization: National Taiwan University Hospital
Department: Department of Surgery
Public date: 2015-03-01
Experiment types: Non-coding RNA profiling by high throughput sequencing
Platforms: GPL13393 AB SOLiD 4 System (Homo sapiens)
Series type: Series
SubSeries: Not available
BioProject: PRJNA172756
Supplementary files: TAR: GSE40049_RAW.tar
Organism: Homo sapiens
Assay: bulk RNA-seq
Samples: 38
Study design: Tumor vs matched normal
Specimen/source: Tissue
Scoring version: intent-aware-scoring-v15
Ranking batch: b69568dd1e4fe1b9ee2d880bf5495d748a7e4c5c11e4107f02528c3be0e76012
Ranking created: 2026-06-05T20:20:27.088676Z
Warning version: intent-aware-warnings-v2

Current Intent Interpretation

Patient tissue tumor-vs-normal

Expectations

Organism: Homo sapiens
Assay: bulk RNA-seq
Specimen/source: patient tissue or biopsy
Controls: matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control

Rules

Default filters: Human only; Bulk RNA-seq only; Tumor-normal only; Tissue or biopsy only; Hide biofluid/model systems
Warning rules: missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Score caps: non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Downgraded contexts: microarray unless explicitly enabled, biofluid-only datasets, cell-line datasets, organoid datasets, xenograft or PDX datasets, non-colorectal disease contexts, or treatment-only experiments

Study Classification

Tumor vs matched normal Tissue

Tumor samples and matched/adjacent normal controls detected.
Tissue-like source terms detected.
Case metadata contains tumor or disease terms.
Control metadata contains normal or healthy-control terms.

Analysis Readiness

Review before analysis

97% DE readiness

Contrast completeness

25/25 pts

Both case and control groups are present in the proposed grouping.

Minimum group size

20/20 pts

Each contrast group has at least 2 samples.

Processed data availability

20/20 pts

Processed data is marked available in the GEO index.

Sample decision clarity

15/15 pts

All samples are assigned to a case or control group.

Blocking warnings

7/10 pts

Warnings are present, but none are critical blockers.

Metadata normalization

10/10 pts

Metadata quality is high enough to support downstream handoff.

Blockers

Secondary RNA assay context should be analyzed separately from ordinary bulk RNA-seq.

Next Steps

Review blockers and update sample grouping or dataset selection before analysis.

Analysis Preparation Checklist

5/6 ready

Group labels reviewed

Needs review

Siftome proposed case and control labels, but no reviewer confirmation is stored yet.

Open the sample grouping CSV and confirm group labels before analysis.

Minimum sample count met

Ready

Both groups meet the minimum of 2 samples.

Confirm whether the cohort is large enough for the intended statistical analysis.

Processed counts available

Ready

Processed data availability is marked true in the GEO index.

Verify that downloaded processed files contain usable count or expression identifiers.

Ambiguous samples handled

Ready

No review-needed or unassigned samples are present in the proposed grouping.

Still scan the grouping table for biology-specific ambiguity.

Exclusion decisions recorded

Ready

No hard-excluded samples were detected by the current rules.

Record any manual exclusions in the downstream analysis notes.

Source links preserved

Ready

The dataset and sample accessions can be linked back to GEO.

Keep GEO dataset and sample links with exported metadata.

Bioinformatician Review

Bioinformatician review required

Ask a bioinformatician to review grouping, count availability, exclusions, and design before DE.

Analysis readiness has blockers that must be resolved before DE.
Assay context may require expert handling before DESeq2-style analysis.

Why This Is Ranked Here

Patient tissue tumor-vs-normal

Not suitable Dataset does not meet the current suitability threshold.

Score Components

relevance 100% Disease or condition metadata normalized. Organism normalized. Assay type normalized. Tissue metadata normalized.
comparison suitability 0% Tumor and normal sample groups detected. No excluded sample type flags detected. Matched tumor/normal design boosted for colorectal tumor-vs-normal tissue triage. Patient tissue or biopsy specimens boosted for tissue comparison triage. Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
metadata quality 100% Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.
data availability 100% Processed data available. Raw data available.
overall 34% Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability. Overall score capped because comparison suitability is weak for the selected search intent. Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Derived Classifications

Organism Homo sapiens Organism remains rule-derived: Homo sapiens.
Assay bulk RNA-seq Assay remains rule-derived: bulk RNA-seq.
Study design Tumor vs matched normal Study design remains rule-derived: Tumor vs matched normal.
Specimen/source Tissue Specimen/source remains rule-derived: Tissue.
Likely case group tumor sample 24 samples
Likely control group normal tissue 14 samples

Warnings

SECONDARY_ASSAY_CONTEXT warning Secondary RNA assay context such as small RNA, miRNA, circRNA, or non-coding RNA was detected.

Intent Interpretation

Active intent Patient tissue tumor-vs-normal Ranks human colorectal tissue or biopsy cohorts where tumor samples can be compared with normal controls.
Organism expectation Homo sapiens Dataset organism is interpreted as Homo sapiens.
Assay expectation bulk RNA-seq Dataset assay is interpreted as bulk RNA-seq.
Specimen assumption patient tissue or biopsy Derived specimen/source is Tissue.
Control-group assumption matched normal, adjacent normal, paired normal, healthy tissue control, or otherwise normal tissue control Derived study design is Tumor vs matched normal; likely groups are tumor sample vs normal tissue.
Score caps Applied when matching conditions are present non-human datasets stay below the primary recommendation band, missing colorectal/colon/rectal/CRC context stays below the primary recommendation band, biofluid and model-system datasets cannot reach Recommended by default, microarray and secondary assays are capped unless explicitly enabled, or small cohorts are capped below high-confidence recommendations
Warning rules 1 active warning missing or unclear control group, unclear disease context, unclear tissue source, mixed sample types, model-system markers, secondary assay context, missing processed data, or small cohort size
Downgrade or exclusion reason Downgraded disease context: not a colorectal/GI cancer cohort. Derived from current-intent ranking reasons and warnings.

Applied Review Decisions

No active review decisions affect this ranking.

Ranking Facts

Recommendation Not suitable Dataset does not meet the current suitability threshold.
Supporting fact Tumor vs matched normal · Tissue · suitability 0%. Contributed to match or upgrade evidence.
Supporting fact Prioritized for patient tissue tumor-vs-normal triage. Contributed to match or upgrade evidence.
Supporting fact Prioritized assay: bulk RNA-seq is the active assay expectation. Contributed to match or upgrade evidence.
Supporting fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to match or upgrade evidence.
Supporting fact Processed data is available for downstream review. Contributed to match or upgrade evidence.
Supporting fact 1 warning require review. Contributed to match or upgrade evidence.
Caution fact Secondary RNA assay context such as small RNA, miRNA, circRNA, or non-coding RNA was detected. Contributed to downgrade or manual-review evidence.
Caution fact Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking. Contributed to downgrade or manual-review evidence.
Caution fact Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because comparison suitability is weak for the selected search intent. Contributed to downgrade or manual-review evidence.
Caution fact Overall score capped because tumor/normal grouping is from a non-colorectal cancer context. Contributed to downgrade or manual-review evidence.
Caution fact Downgraded disease context: not a colorectal/GI cancer cohort. Contributed to downgrade or manual-review evidence.
Caution fact Comparison suitability score is below the Phase 1 recommended threshold. Contributed to downgrade or manual-review evidence.

Manual Corrections

0 active

No active manual corrections are applied to this dataset.

Organism · Normalization rules Organism remains rule-derived: Homo sapiens.
Assay · Normalization rules Assay remains rule-derived: bulk RNA-seq.
Study design · Classifier and grouping rules Study design remains rule-derived: Tumor vs matched normal.
Specimen/source · Normalization rules Specimen/source remains rule-derived: Tissue.

Dataset organism

Dataset field · Organism · Global correction

Wrong organism

Current derived value

Homo sapiens

Raw GEO organism

dataset_accession: GSE40049
organism: Homo sapiens
dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing

Dataset assay

Dataset field · Assay · Global correction

Wrong assay

Current derived value

bulk RNA-seq

Raw GEO assay metadata

assay_type: bulk RNA-seq
experiment_types: Non-coding RNA profiling by high throughput sequencing
platforms: GPL13393 AB SOLiD 4 System (Homo sapiens)
dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing

Study design

Dataset field · Study design · Global correction

Wrong study design

Current derived value

Tumor vs matched normal

Raw GEO study and sample metadata

dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing
experiment_types: Non-coding RNA profiling by high throughput sequencing
sample_context: GSM984330: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2
GSM984331: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1
GSM984332: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8
GSM984333: source_name=Triple-
[Correction source preview truncated.]

Specimen/source type

Dataset field · Specimen/source · Global correction

Wrong specimen/source

Current derived value

Tissue

Raw GEO sample source metadata

dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing
sample_context: GSM984330: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2
GSM984331: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1
GSM984332: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8
GSM984333: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (
[Correction source preview truncated.]

Disease context

Dataset field · Disease context · Global correction

Wrong disease context

Current derived value

breast cancer

Raw GEO disease context metadata

dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing
sample_context: GSM984330: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2
GSM984331: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1
GSM984332: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8
GSM984333: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (
[Correction source preview truncated.]

Intent exclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Exclude from intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE40049
dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM984330: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2
GSM984331: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1
GSM984332: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8
GSM984333: source_name=Trip
[Correction source preview truncated.]

Intent-only inclusion

Search intent · Intent eligibility · Patient tissue tumor-vs-normal

Include only for intent

Current derived value

Eligible for Patient tissue tumor-vs-normal as Not suitable

Raw GEO metadata for intent decision

dataset_accession: GSE40049
dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing
organism: Homo sapiens
assay_type: bulk RNA-seq
sample_context: GSM984330: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2
GSM984331: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1
GSM984332: source_name=Triple-negative breast cancer (Invasive ductal carcinoma); characteristics=age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8
GSM984333: source_name=Trip
[Correction source preview truncated.]

GSM984330 grouping

Sample field · Grouping · Global correction · GSM984330

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984330
sample_title: 291_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2

GSM984330 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984330

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984330
sample_title: 291_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2

GSM984331 grouping

Sample field · Grouping · Global correction · GSM984331

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984331
sample_title: 357_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1

GSM984331 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984331

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984331
sample_title: 357_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1

GSM984332 grouping

Sample field · Grouping · Global correction · GSM984332

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984332
sample_title: 417_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8

GSM984332 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984332

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984332
sample_title: 417_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8

GSM984333 grouping

Sample field · Grouping · Global correction · GSM984333

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984333
sample_title: 452_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 54; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.6

GSM984333 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984333

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984333
sample_title: 452_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 54; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.6

GSM984334 grouping

Sample field · Grouping · Global correction · GSM984334

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984334
sample_title: 477_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 27; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.5

GSM984334 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984334

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984334
sample_title: 477_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 27; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.5

GSM984335 grouping

Sample field · Grouping · Global correction · GSM984335

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984335
sample_title: 507_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 54; Stage: IIA; grade: 3; tumor size: 1; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 6.4

GSM984335 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984335

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984335
sample_title: 507_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 54; Stage: IIA; grade: 3; tumor size: 1; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 6.4

GSM984336 grouping

Sample field · Grouping · Global correction · GSM984336

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984336
sample_title: 545_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 55; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.2

GSM984336 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984336

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984336
sample_title: 545_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 55; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.2

GSM984337 grouping

Sample field · Grouping · Global correction · GSM984337

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984337
sample_title: 557_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 60; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.1

GSM984337 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984337

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984337
sample_title: 557_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 60; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.1

GSM984338 grouping

Sample field · Grouping · Global correction · GSM984338

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984338
sample_title: 574_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 57; Stage: IIA; grade: 2; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.0

GSM984338 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984338

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984338
sample_title: 574_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 57; Stage: IIA; grade: 2; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.0

GSM984339 grouping

Sample field · Grouping · Global correction · GSM984339

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984339
sample_title: 582_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 83; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 3.5

GSM984339 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984339

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984339
sample_title: 582_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 83; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 3.5

GSM984340 grouping

Sample field · Grouping · Global correction · GSM984340

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984340
sample_title: 593_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 55; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.9

GSM984340 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984340

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984340
sample_title: 593_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 55; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.9

GSM984341 grouping

Sample field · Grouping · Global correction · GSM984341

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984341
sample_title: 602_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 44; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.9

GSM984341 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984341

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984341
sample_title: 602_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 44; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.9

GSM984342 grouping

Sample field · Grouping · Global correction · GSM984342

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984342
sample_title: 619_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 37; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 1.8

GSM984342 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984342

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984342
sample_title: 619_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 37; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 1.8

GSM984343 grouping

Sample field · Grouping · Global correction · GSM984343

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984343
sample_title: 621_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 62; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.8

GSM984343 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984343

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984343
sample_title: 621_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 62; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.8

GSM984344 grouping

Sample field · Grouping · Global correction · GSM984344

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984344
sample_title: 673_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 61; Stage: IIA; grade: 2; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 0.7

GSM984344 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984344

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984344
sample_title: 673_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 61; Stage: IIA; grade: 2; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 0.7

GSM984345 grouping

Sample field · Grouping · Global correction · GSM984345

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984345
sample_title: 677_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 65; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 5.5

GSM984345 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984345

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984345
sample_title: 677_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 65; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 5.5

GSM984346 grouping

Sample field · Grouping · Global correction · GSM984346

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984346
sample_title: 881_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 58; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 4.7

GSM984346 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984346

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984346
sample_title: 881_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 58; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 4.7

GSM984347 grouping

Sample field · Grouping · Global correction · GSM984347

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984347
sample_title: 887_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 49; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.6

GSM984347 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984347

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984347
sample_title: 887_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 49; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.6

GSM984348 grouping

Sample field · Grouping · Global correction · GSM984348

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984348
sample_title: 893_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 55; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.5

GSM984348 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984348

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984348
sample_title: 893_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 55; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.5

GSM984349 grouping

Sample field · Grouping · Global correction · GSM984349

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984349
sample_title: 894_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 54; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.6

GSM984349 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984349

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984349
sample_title: 894_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 54; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.6

GSM984350 grouping

Sample field · Grouping · Global correction · GSM984350

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984350
sample_title: 917_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 51; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5

GSM984350 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984350

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984350
sample_title: 917_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 51; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5

GSM984351 grouping

Sample field · Grouping · Global correction · GSM984351

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984351
sample_title: 918_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 38; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5

GSM984351 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984351

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984351
sample_title: 918_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 38; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5

GSM984352 grouping

Sample field · Grouping · Global correction · GSM984352

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984352
sample_title: 922_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 63; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5

GSM984352 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984352

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984352
sample_title: 922_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 63; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5

GSM984353 grouping

Sample field · Grouping · Global correction · GSM984353

Wrong grouping

Current derived value

tumor sample (case)

Raw GEO sample metadata

sample_accession: GSM984353
sample_title: 941_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 52; Stage: IIA; grade: 3; tumor size: 1; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 4.4

GSM984353 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984353

Wrong sample exclusion

Current derived value

Included in derived sample grouping as tumor sample

Raw GEO sample metadata

sample_accession: GSM984353
sample_title: 941_T
source_name: Triple-negative breast cancer (Invasive ductal carcinoma)
characteristics: age (years): 52; Stage: IIA; grade: 3; tumor size: 1; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 4.4

GSM984354 grouping

Sample field · Grouping · Global correction · GSM984354

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984354
sample_title: 291_N
source_name: Adjacent normal tissue
characteristics: age (years): 85; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984354 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984354

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984354
sample_title: 291_N
source_name: Adjacent normal tissue
characteristics: age (years): 85; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984355 grouping

Sample field · Grouping · Global correction · GSM984355

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984355
sample_title: 357_N
source_name: Adjacent normal tissue
characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984355 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984355

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984355
sample_title: 357_N
source_name: Adjacent normal tissue
characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984356 grouping

Sample field · Grouping · Global correction · GSM984356

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984356
sample_title: 477_N
source_name: Adjacent normal tissue
characteristics: age (years): 27; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984356 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984356

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984356
sample_title: 477_N
source_name: Adjacent normal tissue
characteristics: age (years): 27; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984357 grouping

Sample field · Grouping · Global correction · GSM984357

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984357
sample_title: 507_N
source_name: Adjacent normal tissue
characteristics: age (years): 54; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984357 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984357

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984357
sample_title: 507_N
source_name: Adjacent normal tissue
characteristics: age (years): 54; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984358 grouping

Sample field · Grouping · Global correction · GSM984358

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984358
sample_title: 557_N
source_name: Adjacent normal tissue
characteristics: age (years): 60; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984358 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984358

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984358
sample_title: 557_N
source_name: Adjacent normal tissue
characteristics: age (years): 60; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984359 grouping

Sample field · Grouping · Global correction · GSM984359

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984359
sample_title: 574_N
source_name: Adjacent normal tissue
characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984359 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984359

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984359
sample_title: 574_N
source_name: Adjacent normal tissue
characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984360 grouping

Sample field · Grouping · Global correction · GSM984360

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984360
sample_title: 582_N
source_name: Adjacent normal tissue
characteristics: age (years): 83; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984360 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984360

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984360
sample_title: 582_N
source_name: Adjacent normal tissue
characteristics: age (years): 83; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984361 grouping

Sample field · Grouping · Global correction · GSM984361

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984361
sample_title: 602_N
source_name: Adjacent normal tissue
characteristics: age (years): 44; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984361 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984361

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984361
sample_title: 602_N
source_name: Adjacent normal tissue
characteristics: age (years): 44; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984362 grouping

Sample field · Grouping · Global correction · GSM984362

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984362
sample_title: 673_N
source_name: Adjacent normal tissue
characteristics: age (years): 61; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984362 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984362

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984362
sample_title: 673_N
source_name: Adjacent normal tissue
characteristics: age (years): 61; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984363 grouping

Sample field · Grouping · Global correction · GSM984363

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984363
sample_title: 677_N
source_name: Adjacent normal tissue
characteristics: age (years): 65; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984363 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984363

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984363
sample_title: 677_N
source_name: Adjacent normal tissue
characteristics: age (years): 65; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984364 grouping

Sample field · Grouping · Global correction · GSM984364

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984364
sample_title: 881_N
source_name: Adjacent normal tissue
characteristics: age (years): 58; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984364 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984364

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984364
sample_title: 881_N
source_name: Adjacent normal tissue
characteristics: age (years): 58; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984365 grouping

Sample field · Grouping · Global correction · GSM984365

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984365
sample_title: 887_N
source_name: Adjacent normal tissue
characteristics: age (years): 49; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984365 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984365

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984365
sample_title: 887_N
source_name: Adjacent normal tissue
characteristics: age (years): 49; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984366 grouping

Sample field · Grouping · Global correction · GSM984366

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984366
sample_title: 918_N
source_name: Adjacent normal tissue
characteristics: age (years): 38; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984366 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984366

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984366
sample_title: 918_N
source_name: Adjacent normal tissue
characteristics: age (years): 38; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984367 grouping

Sample field · Grouping · Global correction · GSM984367

Wrong grouping

Current derived value

normal tissue (control)

Raw GEO sample metadata

sample_accession: GSM984367
sample_title: 922_N
source_name: Adjacent normal tissue
characteristics: age (years): 63; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

GSM984367 exclusion decision

Sample field · Sample exclusion · Global correction · GSM984367

Wrong sample exclusion

Current derived value

Included in derived sample grouping as normal tissue

Raw GEO sample metadata

sample_accession: GSM984367
sample_title: 922_N
source_name: Adjacent normal tissue
characteristics: age (years): 63; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

Source Evidence

4 sources

GEO

Primary source

Original dataset metadata, sample metadata, source links, and GEO data availability flags.

Dataset accession: GSE40049
Sample records: 38 GSM samples

GEO has priority for original metadata under the Phase 3J source rules.
Processed data: available.
Raw data: available.
No external source conflict is present in the current runtime data.

recount3

Not imported

Planned trusted source for processed count availability.

GEO accession: GSE40049

No recount3 project identifier has been imported for this dataset.
Once imported, recount3 has priority for processed count availability.
The recount3 source filter excludes this dataset until that linkage exists.

Expression Atlas

Not imported

Planned source for curated expression experiment links.

GEO accession: GSE40049

No Expression Atlas experiment identifier has been imported for this dataset.
Once imported, Expression Atlas has priority for curated expression experiment links.
The Expression Atlas source filter excludes this dataset until that linkage exists.

PubMed

Unavailable

Publication context when PubMed identifiers are already known.

GEO accession: GSE40049

No PubMed identifier is present in the current runtime metadata.
No live PubMed search is performed from the dataset detail page.

Dataset Feedback

0 stored

No project feedback stored for this dataset.

Original GEO Metadata

dataset_accession: GSE40049
dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing
organism: Homo sapiens
assay_type: bulk RNA-seq
processed_data_available: true
raw_data_available: true
submission_date: 2012-08-10
last_update_date: 2019-05-15
organization_name: National Taiwan University Hospital
department: Department of Surgery
public_date: 2015-03-01
experiment_types: Non-coding RNA profiling by high throughput sequencing
platforms: GPL13393 AB SOLiD 4 System (Homo sapiens)
sub_series: Not available
bioproject: PRJNA172756
supplementary_files: TAR: GSE40049_RAW.tar
series_type: Series

Why It Matched

Tumor vs matched normal · Tissue · suitability 0%.
Prioritized for patient tissue tumor-vs-normal triage.
Prioritized assay: bulk RNA-seq is the active assay expectation.
Downgraded disease context: not a colorectal/GI cancer cohort.
Processed data is available for downstream review.
1 warning require review.

Why It May Not Be Suitable

Secondary RNA assay context such as small RNA, miRNA, circRNA, or non-coding RNA was detected.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.
Missing or unclear metadata: Treatment clarity: No unclear treatment split detected in the sample metadata.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.
Downgraded disease context: not a colorectal/GI cancer cohort.
Comparison suitability score is below the Phase 1 recommended threshold.

Warnings

warning SECONDARY_ASSAY_CONTEXT Secondary RNA assay context such as small RNA, miRNA, circRNA, or non-coding RNA was detected.

Normalized Fields

156 fields

Field Value Source Origin Confidence Evidence Reason

assay_type bulk RNA-seq dataset GSE40049 Runtime Siftome inference GEO:dataset:GSE40049:d278c0cfdc97833723168e4bb2761d397d0c71bd282d196c7c8686005bc002e9 high confidence bulk rna-seq dataset_accession: GSE40049 dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing organism: Homo sapiens assay_type: bulk RNA-seq pro... keyword match keyword match: bulk rna-seq

disease breast cancer dataset GSE40049 Runtime Siftome inference GEO:dataset:GSE40049:d278c0cfdc97833723168e4bb2761d397d0c71bd282d196c7c8686005bc002e9 high confidence breast cancer dataset_accession: GSE40049 dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing organism: Homo sapiens assay_type: bulk RNA-seq pro... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984330 Runtime Siftome inference GEO:sample:GSM984330:ef7f28981d7f027d00360507cf2c626c4f9645d4ceb6808093e774551d7e79d0 high confidence breast cancer sample_accession: GSM984330 sample_title: 291_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 85; Stage: IIIA; grade: 3; t... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984331 Runtime Siftome inference GEO:sample:GSM984331:64c666177b8ddf87c52c6a5803bf6115c917e2951efb56a48f90dbb5f5414b76 high confidence breast cancer sample_accession: GSM984331 sample_title: 357_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 57; Stage: IIIC; grade: 3; t... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984332 Runtime Siftome inference GEO:sample:GSM984332:5be9c76a9ce8b03c3cc904f20e38e751d8dcfb488b4c1537bb0c2dd1b7e85ad1 high confidence breast cancer sample_accession: GSM984332 sample_title: 417_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 33; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984333 Runtime Siftome inference GEO:sample:GSM984333:aa1d8d568fb9ec478facc341cbc2e07fe2be4f2f2229772e97afa468d562c5e8 high confidence breast cancer sample_accession: GSM984333 sample_title: 452_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984334 Runtime Siftome inference GEO:sample:GSM984334:2cfe3a68592b44892ccd373be783019af8ec2bf7f2da2e70ff833cac3add2f8f high confidence breast cancer sample_accession: GSM984334 sample_title: 477_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 27; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984335 Runtime Siftome inference GEO:sample:GSM984335:b569caf6ab9729594e7b1b2fdf6e2e59536e1a30ebb76645d0725ac153ed39c7 high confidence breast cancer sample_accession: GSM984335 sample_title: 507_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984336 Runtime Siftome inference GEO:sample:GSM984336:c0a855547615b1260a5067d93f68b0a223b8de4422918aaea0962b2689233e97 high confidence breast cancer sample_accession: GSM984336 sample_title: 545_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984337 Runtime Siftome inference GEO:sample:GSM984337:507baf1dbc879ae871eb1d3a853f0a3e188b3d6fcf231a3caca51bc42ba2f5ac high confidence breast cancer sample_accession: GSM984337 sample_title: 557_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 60; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984338 Runtime Siftome inference GEO:sample:GSM984338:7b7e976e9deefe77dedb05c72e88393c079935f78e7a4343ecb398d438a89d1e high confidence breast cancer sample_accession: GSM984338 sample_title: 574_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 57; Stage: IIA; grade: 2; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984339 Runtime Siftome inference GEO:sample:GSM984339:a498b5a9b6884e8a3fa92629425b86d768f4bc6d51c542466961c3a3be2f322d high confidence breast cancer sample_accession: GSM984339 sample_title: 582_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 83; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984340 Runtime Siftome inference GEO:sample:GSM984340:a6214290c56f96e8ea004ae57825b0829ea28231fb7215d2072d9a405c480769 high confidence breast cancer sample_accession: GSM984340 sample_title: 593_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984341 Runtime Siftome inference GEO:sample:GSM984341:58646d70aa59f72e7a56b46e746a925b6d4a08fab2f2df35d69707391d6828ab high confidence breast cancer sample_accession: GSM984341 sample_title: 602_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 44; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984342 Runtime Siftome inference GEO:sample:GSM984342:9487cdc4f43fa612450306dc328532db150b4d8281e6150ca42d7cc173fdd2b7 high confidence breast cancer sample_accession: GSM984342 sample_title: 619_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 37; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984343 Runtime Siftome inference GEO:sample:GSM984343:2b360cda3a2dd78b481cce05411dcb46922d442023bb21d541539a704bc32244 high confidence breast cancer sample_accession: GSM984343 sample_title: 621_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 62; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984344 Runtime Siftome inference GEO:sample:GSM984344:9dcbbb8e77824fb8f2a0c0f5aa84561847de7af9c6bab8f1832b6c43d8495c2f high confidence breast cancer sample_accession: GSM984344 sample_title: 673_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 61; Stage: IIA; grade: 2; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984345 Runtime Siftome inference GEO:sample:GSM984345:4214dd89e494f5e9904a7b360135a47b693df5051a554ab64e26a5c6e47ae0f6 high confidence breast cancer sample_accession: GSM984345 sample_title: 677_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 65; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984346 Runtime Siftome inference GEO:sample:GSM984346:d9102c1e6e9fddd0a86d74867bc8dedc2620cf847e56818dd76ecb12a2c1b3fa high confidence breast cancer sample_accession: GSM984346 sample_title: 881_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 58; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984347 Runtime Siftome inference GEO:sample:GSM984347:5a71dc5dc96f63a4e6b4b25a5a48ac5807f9393da01e160f9e34840399532bfd high confidence breast cancer sample_accession: GSM984347 sample_title: 887_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 49; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984348 Runtime Siftome inference GEO:sample:GSM984348:8141c3cda39b8d9b9a2e88d9ef781acf101df83ff6cbc06c8e527491c73e342a high confidence breast cancer sample_accession: GSM984348 sample_title: 893_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984349 Runtime Siftome inference GEO:sample:GSM984349:59f8ae0c69643bdc4eceac072cefc80cd521ca262c220a103a3b77eb588191c9 high confidence breast cancer sample_accession: GSM984349 sample_title: 894_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984350 Runtime Siftome inference GEO:sample:GSM984350:5966411a30d97977c9b31f3b0b351c302a5e96b54fe9d04f485a117029f8fb11 high confidence breast cancer sample_accession: GSM984350 sample_title: 917_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 51; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984351 Runtime Siftome inference GEO:sample:GSM984351:65d9623c80f82e0d78aafb8dc0353234ea99032647c8befb0b431cbac1fc673c high confidence breast cancer sample_accession: GSM984351 sample_title: 918_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 38; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984352 Runtime Siftome inference GEO:sample:GSM984352:9f5dc64319e009b4297247fa6170e8d035168538ef742215e07548c61d66a1bc high confidence breast cancer sample_accession: GSM984352 sample_title: 922_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 63; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary disease match: breast cancer

disease breast cancer sample GSM984353 Runtime Siftome inference GEO:sample:GSM984353:36fc2ad21a17f6cfb8f225d39c4c8afca9348041b748bfa1b2a67647678611c6 high confidence breast cancer sample_accession: GSM984353 sample_title: 941_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 52; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary disease match: breast cancer

normal_tissue_type adjacent normal sample GSM984354 Runtime Siftome inference GEO:sample:GSM984354:928932e96c79e5a977f8086a6cc212cb7e6d8307f966120f97e99638dc2a7b71 high confidence adjacent normal sample_accession: GSM984354 sample_title: 291_N source_name: Adjacent normal tissue characteristics: age (years): 85; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984355 Runtime Siftome inference GEO:sample:GSM984355:c26c54dc4284347d0c97f494665f2a69f35ef6bfd863924f8c42ef1a4cd7b946 high confidence adjacent normal sample_accession: GSM984355 sample_title: 357_N source_name: Adjacent normal tissue characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984356 Runtime Siftome inference GEO:sample:GSM984356:a0c718da7eb880ab02d6066bd0bc90299877c38c08977a14231b7b629e653e89 high confidence adjacent normal sample_accession: GSM984356 sample_title: 477_N source_name: Adjacent normal tissue characteristics: age (years): 27; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984357 Runtime Siftome inference GEO:sample:GSM984357:41c4bd9abf132c59c8db912fd02318d70999c4e9d7a78e8e9db7e20855b99cfe high confidence adjacent normal sample_accession: GSM984357 sample_title: 507_N source_name: Adjacent normal tissue characteristics: age (years): 54; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984358 Runtime Siftome inference GEO:sample:GSM984358:a86e746f8419204f9e8b0e33b7dceb8c3537f0f4bebf72ece83a0ca39089c2e6 high confidence adjacent normal sample_accession: GSM984358 sample_title: 557_N source_name: Adjacent normal tissue characteristics: age (years): 60; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984359 Runtime Siftome inference GEO:sample:GSM984359:2f044a85172c80ef6f7c55d1166febc90fa7031abedb17ece0c5121beb783089 high confidence adjacent normal sample_accession: GSM984359 sample_title: 574_N source_name: Adjacent normal tissue characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984360 Runtime Siftome inference GEO:sample:GSM984360:46a0a7bd777ec5bcdd20380b6f40ebe24afed059310c1f345eea780ec69cbc59 high confidence adjacent normal sample_accession: GSM984360 sample_title: 582_N source_name: Adjacent normal tissue characteristics: age (years): 83; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984361 Runtime Siftome inference GEO:sample:GSM984361:4212471fcb93fb42caa6f2e382c53b664520781062d7fb0921447350a22d37c1 high confidence adjacent normal sample_accession: GSM984361 sample_title: 602_N source_name: Adjacent normal tissue characteristics: age (years): 44; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984362 Runtime Siftome inference GEO:sample:GSM984362:6d202ec18f6a582fa3ad57ae430b74a9ccb157297a743ac3a4d220661b7a88dc high confidence adjacent normal sample_accession: GSM984362 sample_title: 673_N source_name: Adjacent normal tissue characteristics: age (years): 61; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984363 Runtime Siftome inference GEO:sample:GSM984363:6f78369aad0b9db73e322104cb8244a80fc3b8ca614d82093079b89c5d1f1f5f high confidence adjacent normal sample_accession: GSM984363 sample_title: 677_N source_name: Adjacent normal tissue characteristics: age (years): 65; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984364 Runtime Siftome inference GEO:sample:GSM984364:99994ec20d3772b0735716ed83197fedb304a3b57490fb30418704b682a0d0e5 high confidence adjacent normal sample_accession: GSM984364 sample_title: 881_N source_name: Adjacent normal tissue characteristics: age (years): 58; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984365 Runtime Siftome inference GEO:sample:GSM984365:d17ffd5cdf55e63025ac22c51c58026c06b6de51d80e1d30ad58e13b5b97a926 high confidence adjacent normal sample_accession: GSM984365 sample_title: 887_N source_name: Adjacent normal tissue characteristics: age (years): 49; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984366 Runtime Siftome inference GEO:sample:GSM984366:17bcb8932a17ccae9a3f9d0e1ab0593eda090fd171e22652c3f9d415f1f050a3 high confidence adjacent normal sample_accession: GSM984366 sample_title: 918_N source_name: Adjacent normal tissue characteristics: age (years): 38; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

normal_tissue_type adjacent normal sample GSM984367 Runtime Siftome inference GEO:sample:GSM984367:53fa08067de216ad28f8f111914da9603b62f99e86af9e31393de64d2bf5190d high confidence adjacent normal sample_accession: GSM984367 sample_title: 922_N source_name: Adjacent normal tissue characteristics: age (years): 63; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary normal tissue type match: adjacent normal

organism Homo sapiens dataset GSE40049 Runtime Siftome inference GEO:dataset:GSE40049:d278c0cfdc97833723168e4bb2761d397d0c71bd282d196c7c8686005bc002e9 high confidence homo sapiens dataset_accession: GSE40049 dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing organism: Homo sapiens assay_type: bulk RNA-seq pro... keyword match keyword match: homo sapiens

sample_type tumor sample sample GSM984330 Runtime Siftome inference GEO:sample:GSM984330:ef7f28981d7f027d00360507cf2c626c4f9645d4ceb6808093e774551d7e79d0 low confidence tumor sample_accession: GSM984330 sample_title: 291_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 85; Stage: IIIA; grade: 3; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984331 Runtime Siftome inference GEO:sample:GSM984331:64c666177b8ddf87c52c6a5803bf6115c917e2951efb56a48f90dbb5f5414b76 low confidence tumor sample_accession: GSM984331 sample_title: 357_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 57; Stage: IIIC; grade: 3; t... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984332 Runtime Siftome inference GEO:sample:GSM984332:5be9c76a9ce8b03c3cc904f20e38e751d8dcfb488b4c1537bb0c2dd1b7e85ad1 low confidence tumor sample_accession: GSM984332 sample_title: 417_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 33; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984333 Runtime Siftome inference GEO:sample:GSM984333:aa1d8d568fb9ec478facc341cbc2e07fe2be4f2f2229772e97afa468d562c5e8 low confidence tumor sample_accession: GSM984333 sample_title: 452_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984334 Runtime Siftome inference GEO:sample:GSM984334:2cfe3a68592b44892ccd373be783019af8ec2bf7f2da2e70ff833cac3add2f8f low confidence tumor sample_accession: GSM984334 sample_title: 477_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 27; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984335 Runtime Siftome inference GEO:sample:GSM984335:b569caf6ab9729594e7b1b2fdf6e2e59536e1a30ebb76645d0725ac153ed39c7 low confidence tumor sample_accession: GSM984335 sample_title: 507_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984336 Runtime Siftome inference GEO:sample:GSM984336:c0a855547615b1260a5067d93f68b0a223b8de4422918aaea0962b2689233e97 low confidence tumor sample_accession: GSM984336 sample_title: 545_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984337 Runtime Siftome inference GEO:sample:GSM984337:507baf1dbc879ae871eb1d3a853f0a3e188b3d6fcf231a3caca51bc42ba2f5ac low confidence tumor sample_accession: GSM984337 sample_title: 557_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 60; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984338 Runtime Siftome inference GEO:sample:GSM984338:7b7e976e9deefe77dedb05c72e88393c079935f78e7a4343ecb398d438a89d1e low confidence tumor sample_accession: GSM984338 sample_title: 574_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 57; Stage: IIA; grade: 2; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984339 Runtime Siftome inference GEO:sample:GSM984339:a498b5a9b6884e8a3fa92629425b86d768f4bc6d51c542466961c3a3be2f322d low confidence tumor sample_accession: GSM984339 sample_title: 582_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 83; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984340 Runtime Siftome inference GEO:sample:GSM984340:a6214290c56f96e8ea004ae57825b0829ea28231fb7215d2072d9a405c480769 low confidence tumor sample_accession: GSM984340 sample_title: 593_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984341 Runtime Siftome inference GEO:sample:GSM984341:58646d70aa59f72e7a56b46e746a925b6d4a08fab2f2df35d69707391d6828ab low confidence tumor sample_accession: GSM984341 sample_title: 602_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 44; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984342 Runtime Siftome inference GEO:sample:GSM984342:9487cdc4f43fa612450306dc328532db150b4d8281e6150ca42d7cc173fdd2b7 low confidence tumor sample_accession: GSM984342 sample_title: 619_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 37; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984343 Runtime Siftome inference GEO:sample:GSM984343:2b360cda3a2dd78b481cce05411dcb46922d442023bb21d541539a704bc32244 low confidence tumor sample_accession: GSM984343 sample_title: 621_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 62; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984344 Runtime Siftome inference GEO:sample:GSM984344:9dcbbb8e77824fb8f2a0c0f5aa84561847de7af9c6bab8f1832b6c43d8495c2f low confidence tumor sample_accession: GSM984344 sample_title: 673_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 61; Stage: IIA; grade: 2; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984345 Runtime Siftome inference GEO:sample:GSM984345:4214dd89e494f5e9904a7b360135a47b693df5051a554ab64e26a5c6e47ae0f6 low confidence tumor sample_accession: GSM984345 sample_title: 677_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 65; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984346 Runtime Siftome inference GEO:sample:GSM984346:d9102c1e6e9fddd0a86d74867bc8dedc2620cf847e56818dd76ecb12a2c1b3fa low confidence tumor sample_accession: GSM984346 sample_title: 881_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 58; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984347 Runtime Siftome inference GEO:sample:GSM984347:5a71dc5dc96f63a4e6b4b25a5a48ac5807f9393da01e160f9e34840399532bfd low confidence tumor sample_accession: GSM984347 sample_title: 887_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 49; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984348 Runtime Siftome inference GEO:sample:GSM984348:8141c3cda39b8d9b9a2e88d9ef781acf101df83ff6cbc06c8e527491c73e342a low confidence tumor sample_accession: GSM984348 sample_title: 893_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984349 Runtime Siftome inference GEO:sample:GSM984349:59f8ae0c69643bdc4eceac072cefc80cd521ca262c220a103a3b77eb588191c9 low confidence tumor sample_accession: GSM984349 sample_title: 894_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984350 Runtime Siftome inference GEO:sample:GSM984350:5966411a30d97977c9b31f3b0b351c302a5e96b54fe9d04f485a117029f8fb11 low confidence tumor sample_accession: GSM984350 sample_title: 917_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 51; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984351 Runtime Siftome inference GEO:sample:GSM984351:65d9623c80f82e0d78aafb8dc0353234ea99032647c8befb0b431cbac1fc673c low confidence tumor sample_accession: GSM984351 sample_title: 918_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 38; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984352 Runtime Siftome inference GEO:sample:GSM984352:9f5dc64319e009b4297247fa6170e8d035168538ef742215e07548c61d66a1bc low confidence tumor sample_accession: GSM984352 sample_title: 922_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 63; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type tumor sample sample GSM984353 Runtime Siftome inference GEO:sample:GSM984353:36fc2ad21a17f6cfb8f225d39c4c8afca9348041b748bfa1b2a67647678611c6 low confidence tumor sample_accession: GSM984353 sample_title: 941_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 52; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984354 Runtime Siftome inference GEO:sample:GSM984354:928932e96c79e5a977f8086a6cc212cb7e6d8307f966120f97e99638dc2a7b71 high confidence adjacent normal sample_accession: GSM984354 sample_title: 291_N source_name: Adjacent normal tissue characteristics: age (years): 85; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984354 Runtime Siftome inference GEO:sample:GSM984354:928932e96c79e5a977f8086a6cc212cb7e6d8307f966120f97e99638dc2a7b71 low confidence tumor sample_accession: GSM984354 sample_title: 291_N source_name: Adjacent normal tissue characteristics: age (years): 85; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984355 Runtime Siftome inference GEO:sample:GSM984355:c26c54dc4284347d0c97f494665f2a69f35ef6bfd863924f8c42ef1a4cd7b946 high confidence adjacent normal sample_accession: GSM984355 sample_title: 357_N source_name: Adjacent normal tissue characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984355 Runtime Siftome inference GEO:sample:GSM984355:c26c54dc4284347d0c97f494665f2a69f35ef6bfd863924f8c42ef1a4cd7b946 low confidence tumor sample_accession: GSM984355 sample_title: 357_N source_name: Adjacent normal tissue characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984356 Runtime Siftome inference GEO:sample:GSM984356:a0c718da7eb880ab02d6066bd0bc90299877c38c08977a14231b7b629e653e89 high confidence adjacent normal sample_accession: GSM984356 sample_title: 477_N source_name: Adjacent normal tissue characteristics: age (years): 27; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984356 Runtime Siftome inference GEO:sample:GSM984356:a0c718da7eb880ab02d6066bd0bc90299877c38c08977a14231b7b629e653e89 low confidence tumor sample_accession: GSM984356 sample_title: 477_N source_name: Adjacent normal tissue characteristics: age (years): 27; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984357 Runtime Siftome inference GEO:sample:GSM984357:41c4bd9abf132c59c8db912fd02318d70999c4e9d7a78e8e9db7e20855b99cfe high confidence adjacent normal sample_accession: GSM984357 sample_title: 507_N source_name: Adjacent normal tissue characteristics: age (years): 54; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984357 Runtime Siftome inference GEO:sample:GSM984357:41c4bd9abf132c59c8db912fd02318d70999c4e9d7a78e8e9db7e20855b99cfe low confidence tumor sample_accession: GSM984357 sample_title: 507_N source_name: Adjacent normal tissue characteristics: age (years): 54; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984358 Runtime Siftome inference GEO:sample:GSM984358:a86e746f8419204f9e8b0e33b7dceb8c3537f0f4bebf72ece83a0ca39089c2e6 high confidence adjacent normal sample_accession: GSM984358 sample_title: 557_N source_name: Adjacent normal tissue characteristics: age (years): 60; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984358 Runtime Siftome inference GEO:sample:GSM984358:a86e746f8419204f9e8b0e33b7dceb8c3537f0f4bebf72ece83a0ca39089c2e6 low confidence tumor sample_accession: GSM984358 sample_title: 557_N source_name: Adjacent normal tissue characteristics: age (years): 60; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984359 Runtime Siftome inference GEO:sample:GSM984359:2f044a85172c80ef6f7c55d1166febc90fa7031abedb17ece0c5121beb783089 high confidence adjacent normal sample_accession: GSM984359 sample_title: 574_N source_name: Adjacent normal tissue characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984359 Runtime Siftome inference GEO:sample:GSM984359:2f044a85172c80ef6f7c55d1166febc90fa7031abedb17ece0c5121beb783089 low confidence tumor sample_accession: GSM984359 sample_title: 574_N source_name: Adjacent normal tissue characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984360 Runtime Siftome inference GEO:sample:GSM984360:46a0a7bd777ec5bcdd20380b6f40ebe24afed059310c1f345eea780ec69cbc59 high confidence adjacent normal sample_accession: GSM984360 sample_title: 582_N source_name: Adjacent normal tissue characteristics: age (years): 83; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984360 Runtime Siftome inference GEO:sample:GSM984360:46a0a7bd777ec5bcdd20380b6f40ebe24afed059310c1f345eea780ec69cbc59 low confidence tumor sample_accession: GSM984360 sample_title: 582_N source_name: Adjacent normal tissue characteristics: age (years): 83; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984361 Runtime Siftome inference GEO:sample:GSM984361:4212471fcb93fb42caa6f2e382c53b664520781062d7fb0921447350a22d37c1 high confidence adjacent normal sample_accession: GSM984361 sample_title: 602_N source_name: Adjacent normal tissue characteristics: age (years): 44; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984361 Runtime Siftome inference GEO:sample:GSM984361:4212471fcb93fb42caa6f2e382c53b664520781062d7fb0921447350a22d37c1 low confidence tumor sample_accession: GSM984361 sample_title: 602_N source_name: Adjacent normal tissue characteristics: age (years): 44; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984362 Runtime Siftome inference GEO:sample:GSM984362:6d202ec18f6a582fa3ad57ae430b74a9ccb157297a743ac3a4d220661b7a88dc high confidence adjacent normal sample_accession: GSM984362 sample_title: 673_N source_name: Adjacent normal tissue characteristics: age (years): 61; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984362 Runtime Siftome inference GEO:sample:GSM984362:6d202ec18f6a582fa3ad57ae430b74a9ccb157297a743ac3a4d220661b7a88dc low confidence tumor sample_accession: GSM984362 sample_title: 673_N source_name: Adjacent normal tissue characteristics: age (years): 61; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984363 Runtime Siftome inference GEO:sample:GSM984363:6f78369aad0b9db73e322104cb8244a80fc3b8ca614d82093079b89c5d1f1f5f high confidence adjacent normal sample_accession: GSM984363 sample_title: 677_N source_name: Adjacent normal tissue characteristics: age (years): 65; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984363 Runtime Siftome inference GEO:sample:GSM984363:6f78369aad0b9db73e322104cb8244a80fc3b8ca614d82093079b89c5d1f1f5f low confidence tumor sample_accession: GSM984363 sample_title: 677_N source_name: Adjacent normal tissue characteristics: age (years): 65; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984364 Runtime Siftome inference GEO:sample:GSM984364:99994ec20d3772b0735716ed83197fedb304a3b57490fb30418704b682a0d0e5 high confidence adjacent normal sample_accession: GSM984364 sample_title: 881_N source_name: Adjacent normal tissue characteristics: age (years): 58; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984364 Runtime Siftome inference GEO:sample:GSM984364:99994ec20d3772b0735716ed83197fedb304a3b57490fb30418704b682a0d0e5 low confidence tumor sample_accession: GSM984364 sample_title: 881_N source_name: Adjacent normal tissue characteristics: age (years): 58; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984365 Runtime Siftome inference GEO:sample:GSM984365:d17ffd5cdf55e63025ac22c51c58026c06b6de51d80e1d30ad58e13b5b97a926 high confidence adjacent normal sample_accession: GSM984365 sample_title: 887_N source_name: Adjacent normal tissue characteristics: age (years): 49; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984365 Runtime Siftome inference GEO:sample:GSM984365:d17ffd5cdf55e63025ac22c51c58026c06b6de51d80e1d30ad58e13b5b97a926 low confidence tumor sample_accession: GSM984365 sample_title: 887_N source_name: Adjacent normal tissue characteristics: age (years): 49; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984366 Runtime Siftome inference GEO:sample:GSM984366:17bcb8932a17ccae9a3f9d0e1ab0593eda090fd171e22652c3f9d415f1f050a3 high confidence adjacent normal sample_accession: GSM984366 sample_title: 918_N source_name: Adjacent normal tissue characteristics: age (years): 38; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984366 Runtime Siftome inference GEO:sample:GSM984366:17bcb8932a17ccae9a3f9d0e1ab0593eda090fd171e22652c3f9d415f1f050a3 low confidence tumor sample_accession: GSM984366 sample_title: 918_N source_name: Adjacent normal tissue characteristics: age (years): 38; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

sample_type normal tissue sample GSM984367 Runtime Siftome inference GEO:sample:GSM984367:53fa08067de216ad28f8f111914da9603b62f99e86af9e31393de64d2bf5190d high confidence adjacent normal sample_accession: GSM984367 sample_title: 922_N source_name: Adjacent normal tissue characteristics: age (years): 63; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: adjacent normal

sample_type tumor sample sample GSM984367 Runtime Siftome inference GEO:sample:GSM984367:53fa08067de216ad28f8f111914da9603b62f99e86af9e31393de64d2bf5190d low confidence tumor sample_accession: GSM984367 sample_title: 922_N source_name: Adjacent normal tissue characteristics: age (years): 63; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary sample type match: tumor

tissue breast dataset GSE40049 Runtime Siftome inference GEO:dataset:GSE40049:d278c0cfdc97833723168e4bb2761d397d0c71bd282d196c7c8686005bc002e9 low confidence breast dataset_accession: GSE40049 dataset_title: Deregulated microRNAs in triple-negative breast cancer revealed by deep sequencing organism: Homo sapiens assay_type: bulk RNA-seq pro... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984330 Runtime Siftome inference GEO:sample:GSM984330:ef7f28981d7f027d00360507cf2c626c4f9645d4ceb6808093e774551d7e79d0 low confidence breast sample_accession: GSM984330 sample_title: 291_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 85; Stage: IIIA; grade: 3; t... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984331 Runtime Siftome inference GEO:sample:GSM984331:64c666177b8ddf87c52c6a5803bf6115c917e2951efb56a48f90dbb5f5414b76 low confidence breast sample_accession: GSM984331 sample_title: 357_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 57; Stage: IIIC; grade: 3; t... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984332 Runtime Siftome inference GEO:sample:GSM984332:5be9c76a9ce8b03c3cc904f20e38e751d8dcfb488b4c1537bb0c2dd1b7e85ad1 low confidence breast sample_accession: GSM984332 sample_title: 417_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 33; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984333 Runtime Siftome inference GEO:sample:GSM984333:aa1d8d568fb9ec478facc341cbc2e07fe2be4f2f2229772e97afa468d562c5e8 low confidence breast sample_accession: GSM984333 sample_title: 452_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984334 Runtime Siftome inference GEO:sample:GSM984334:2cfe3a68592b44892ccd373be783019af8ec2bf7f2da2e70ff833cac3add2f8f low confidence breast sample_accession: GSM984334 sample_title: 477_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 27; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984335 Runtime Siftome inference GEO:sample:GSM984335:b569caf6ab9729594e7b1b2fdf6e2e59536e1a30ebb76645d0725ac153ed39c7 low confidence breast sample_accession: GSM984335 sample_title: 507_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984336 Runtime Siftome inference GEO:sample:GSM984336:c0a855547615b1260a5067d93f68b0a223b8de4422918aaea0962b2689233e97 low confidence breast sample_accession: GSM984336 sample_title: 545_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984337 Runtime Siftome inference GEO:sample:GSM984337:507baf1dbc879ae871eb1d3a853f0a3e188b3d6fcf231a3caca51bc42ba2f5ac low confidence breast sample_accession: GSM984337 sample_title: 557_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 60; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984338 Runtime Siftome inference GEO:sample:GSM984338:7b7e976e9deefe77dedb05c72e88393c079935f78e7a4343ecb398d438a89d1e low confidence breast sample_accession: GSM984338 sample_title: 574_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 57; Stage: IIA; grade: 2; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984339 Runtime Siftome inference GEO:sample:GSM984339:a498b5a9b6884e8a3fa92629425b86d768f4bc6d51c542466961c3a3be2f322d low confidence breast sample_accession: GSM984339 sample_title: 582_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 83; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984340 Runtime Siftome inference GEO:sample:GSM984340:a6214290c56f96e8ea004ae57825b0829ea28231fb7215d2072d9a405c480769 low confidence breast sample_accession: GSM984340 sample_title: 593_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984341 Runtime Siftome inference GEO:sample:GSM984341:58646d70aa59f72e7a56b46e746a925b6d4a08fab2f2df35d69707391d6828ab low confidence breast sample_accession: GSM984341 sample_title: 602_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 44; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984342 Runtime Siftome inference GEO:sample:GSM984342:9487cdc4f43fa612450306dc328532db150b4d8281e6150ca42d7cc173fdd2b7 low confidence breast sample_accession: GSM984342 sample_title: 619_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 37; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984343 Runtime Siftome inference GEO:sample:GSM984343:2b360cda3a2dd78b481cce05411dcb46922d442023bb21d541539a704bc32244 low confidence breast sample_accession: GSM984343 sample_title: 621_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 62; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984344 Runtime Siftome inference GEO:sample:GSM984344:9dcbbb8e77824fb8f2a0c0f5aa84561847de7af9c6bab8f1832b6c43d8495c2f low confidence breast sample_accession: GSM984344 sample_title: 673_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 61; Stage: IIA; grade: 2; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984345 Runtime Siftome inference GEO:sample:GSM984345:4214dd89e494f5e9904a7b360135a47b693df5051a554ab64e26a5c6e47ae0f6 low confidence breast sample_accession: GSM984345 sample_title: 677_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 65; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984346 Runtime Siftome inference GEO:sample:GSM984346:d9102c1e6e9fddd0a86d74867bc8dedc2620cf847e56818dd76ecb12a2c1b3fa low confidence breast sample_accession: GSM984346 sample_title: 881_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 58; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984347 Runtime Siftome inference GEO:sample:GSM984347:5a71dc5dc96f63a4e6b4b25a5a48ac5807f9393da01e160f9e34840399532bfd low confidence breast sample_accession: GSM984347 sample_title: 887_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 49; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984348 Runtime Siftome inference GEO:sample:GSM984348:8141c3cda39b8d9b9a2e88d9ef781acf101df83ff6cbc06c8e527491c73e342a low confidence breast sample_accession: GSM984348 sample_title: 893_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984349 Runtime Siftome inference GEO:sample:GSM984349:59f8ae0c69643bdc4eceac072cefc80cd521ca262c220a103a3b77eb588191c9 low confidence breast sample_accession: GSM984349 sample_title: 894_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984350 Runtime Siftome inference GEO:sample:GSM984350:5966411a30d97977c9b31f3b0b351c302a5e96b54fe9d04f485a117029f8fb11 low confidence breast sample_accession: GSM984350 sample_title: 917_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 51; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984351 Runtime Siftome inference GEO:sample:GSM984351:65d9623c80f82e0d78aafb8dc0353234ea99032647c8befb0b431cbac1fc673c low confidence breast sample_accession: GSM984351 sample_title: 918_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 38; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984352 Runtime Siftome inference GEO:sample:GSM984352:9f5dc64319e009b4297247fa6170e8d035168538ef742215e07548c61d66a1bc low confidence breast sample_accession: GSM984352 sample_title: 922_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 63; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary tissue match: breast

tissue breast sample GSM984353 Runtime Siftome inference GEO:sample:GSM984353:36fc2ad21a17f6cfb8f225d39c4c8afca9348041b748bfa1b2a67647678611c6 low confidence breast sample_accession: GSM984353 sample_title: 941_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 52; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tissue match: breast

tumor_type metastatic tumor sample GSM984330 Runtime Siftome inference GEO:sample:GSM984330:ef7f28981d7f027d00360507cf2c626c4f9645d4ceb6808093e774551d7e79d0 medium confidence metastasis sample_accession: GSM984330 sample_title: 291_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 85; Stage: IIIA; grade: 3; t... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984331 Runtime Siftome inference GEO:sample:GSM984331:64c666177b8ddf87c52c6a5803bf6115c917e2951efb56a48f90dbb5f5414b76 medium confidence metastasis sample_accession: GSM984331 sample_title: 357_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 57; Stage: IIIC; grade: 3; t... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984332 Runtime Siftome inference GEO:sample:GSM984332:5be9c76a9ce8b03c3cc904f20e38e751d8dcfb488b4c1537bb0c2dd1b7e85ad1 medium confidence metastasis sample_accession: GSM984332 sample_title: 417_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 33; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984333 Runtime Siftome inference GEO:sample:GSM984333:aa1d8d568fb9ec478facc341cbc2e07fe2be4f2f2229772e97afa468d562c5e8 medium confidence metastasis sample_accession: GSM984333 sample_title: 452_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984334 Runtime Siftome inference GEO:sample:GSM984334:2cfe3a68592b44892ccd373be783019af8ec2bf7f2da2e70ff833cac3add2f8f medium confidence metastasis sample_accession: GSM984334 sample_title: 477_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 27; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984335 Runtime Siftome inference GEO:sample:GSM984335:b569caf6ab9729594e7b1b2fdf6e2e59536e1a30ebb76645d0725ac153ed39c7 medium confidence metastasis sample_accession: GSM984335 sample_title: 507_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984336 Runtime Siftome inference GEO:sample:GSM984336:c0a855547615b1260a5067d93f68b0a223b8de4422918aaea0962b2689233e97 medium confidence metastasis sample_accession: GSM984336 sample_title: 545_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984337 Runtime Siftome inference GEO:sample:GSM984337:507baf1dbc879ae871eb1d3a853f0a3e188b3d6fcf231a3caca51bc42ba2f5ac medium confidence metastasis sample_accession: GSM984337 sample_title: 557_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 60; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984338 Runtime Siftome inference GEO:sample:GSM984338:7b7e976e9deefe77dedb05c72e88393c079935f78e7a4343ecb398d438a89d1e medium confidence metastasis sample_accession: GSM984338 sample_title: 574_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 57; Stage: IIA; grade: 2; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984339 Runtime Siftome inference GEO:sample:GSM984339:a498b5a9b6884e8a3fa92629425b86d768f4bc6d51c542466961c3a3be2f322d medium confidence metastasis sample_accession: GSM984339 sample_title: 582_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 83; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984340 Runtime Siftome inference GEO:sample:GSM984340:a6214290c56f96e8ea004ae57825b0829ea28231fb7215d2072d9a405c480769 medium confidence metastasis sample_accession: GSM984340 sample_title: 593_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984341 Runtime Siftome inference GEO:sample:GSM984341:58646d70aa59f72e7a56b46e746a925b6d4a08fab2f2df35d69707391d6828ab medium confidence metastasis sample_accession: GSM984341 sample_title: 602_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 44; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984342 Runtime Siftome inference GEO:sample:GSM984342:9487cdc4f43fa612450306dc328532db150b4d8281e6150ca42d7cc173fdd2b7 medium confidence metastasis sample_accession: GSM984342 sample_title: 619_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 37; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984343 Runtime Siftome inference GEO:sample:GSM984343:2b360cda3a2dd78b481cce05411dcb46922d442023bb21d541539a704bc32244 medium confidence metastasis sample_accession: GSM984343 sample_title: 621_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 62; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984344 Runtime Siftome inference GEO:sample:GSM984344:9dcbbb8e77824fb8f2a0c0f5aa84561847de7af9c6bab8f1832b6c43d8495c2f medium confidence metastasis sample_accession: GSM984344 sample_title: 673_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 61; Stage: IIA; grade: 2; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984345 Runtime Siftome inference GEO:sample:GSM984345:4214dd89e494f5e9904a7b360135a47b693df5051a554ab64e26a5c6e47ae0f6 medium confidence metastasis sample_accession: GSM984345 sample_title: 677_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 65; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984346 Runtime Siftome inference GEO:sample:GSM984346:d9102c1e6e9fddd0a86d74867bc8dedc2620cf847e56818dd76ecb12a2c1b3fa medium confidence metastasis sample_accession: GSM984346 sample_title: 881_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 58; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984347 Runtime Siftome inference GEO:sample:GSM984347:5a71dc5dc96f63a4e6b4b25a5a48ac5807f9393da01e160f9e34840399532bfd medium confidence metastasis sample_accession: GSM984347 sample_title: 887_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 49; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984348 Runtime Siftome inference GEO:sample:GSM984348:8141c3cda39b8d9b9a2e88d9ef781acf101df83ff6cbc06c8e527491c73e342a medium confidence metastasis sample_accession: GSM984348 sample_title: 893_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 55; Stage: IIB; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984349 Runtime Siftome inference GEO:sample:GSM984349:59f8ae0c69643bdc4eceac072cefc80cd521ca262c220a103a3b77eb588191c9 medium confidence metastasis sample_accession: GSM984349 sample_title: 894_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 54; Stage: I; grade: 2; tumo... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984350 Runtime Siftome inference GEO:sample:GSM984350:5966411a30d97977c9b31f3b0b351c302a5e96b54fe9d04f485a117029f8fb11 medium confidence metastasis sample_accession: GSM984350 sample_title: 917_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 51; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984351 Runtime Siftome inference GEO:sample:GSM984351:65d9623c80f82e0d78aafb8dc0353234ea99032647c8befb0b431cbac1fc673c medium confidence metastasis sample_accession: GSM984351 sample_title: 918_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 38; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984352 Runtime Siftome inference GEO:sample:GSM984352:9f5dc64319e009b4297247fa6170e8d035168538ef742215e07548c61d66a1bc medium confidence metastasis sample_accession: GSM984352 sample_title: 922_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 63; Stage: I; grade: 3; tumo... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984353 Runtime Siftome inference GEO:sample:GSM984353:36fc2ad21a17f6cfb8f225d39c4c8afca9348041b748bfa1b2a67647678611c6 medium confidence metastasis sample_accession: GSM984353 sample_title: 941_T source_name: Triple-negative breast cancer (Invasive ductal carcinoma) characteristics: age (years): 52; Stage: IIA; grade: 3; tu... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984354 Runtime Siftome inference GEO:sample:GSM984354:928932e96c79e5a977f8086a6cc212cb7e6d8307f966120f97e99638dc2a7b71 medium confidence metastasis sample_accession: GSM984354 sample_title: 291_N source_name: Adjacent normal tissue characteristics: age (years): 85; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984355 Runtime Siftome inference GEO:sample:GSM984355:c26c54dc4284347d0c97f494665f2a69f35ef6bfd863924f8c42ef1a4cd7b946 medium confidence metastasis sample_accession: GSM984355 sample_title: 357_N source_name: Adjacent normal tissue characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984356 Runtime Siftome inference GEO:sample:GSM984356:a0c718da7eb880ab02d6066bd0bc90299877c38c08977a14231b7b629e653e89 medium confidence metastasis sample_accession: GSM984356 sample_title: 477_N source_name: Adjacent normal tissue characteristics: age (years): 27; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984357 Runtime Siftome inference GEO:sample:GSM984357:41c4bd9abf132c59c8db912fd02318d70999c4e9d7a78e8e9db7e20855b99cfe medium confidence metastasis sample_accession: GSM984357 sample_title: 507_N source_name: Adjacent normal tissue characteristics: age (years): 54; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984358 Runtime Siftome inference GEO:sample:GSM984358:a86e746f8419204f9e8b0e33b7dceb8c3537f0f4bebf72ece83a0ca39089c2e6 medium confidence metastasis sample_accession: GSM984358 sample_title: 557_N source_name: Adjacent normal tissue characteristics: age (years): 60; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984359 Runtime Siftome inference GEO:sample:GSM984359:2f044a85172c80ef6f7c55d1166febc90fa7031abedb17ece0c5121beb783089 medium confidence metastasis sample_accession: GSM984359 sample_title: 574_N source_name: Adjacent normal tissue characteristics: age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984360 Runtime Siftome inference GEO:sample:GSM984360:46a0a7bd777ec5bcdd20380b6f40ebe24afed059310c1f345eea780ec69cbc59 medium confidence metastasis sample_accession: GSM984360 sample_title: 582_N source_name: Adjacent normal tissue characteristics: age (years): 83; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984361 Runtime Siftome inference GEO:sample:GSM984361:4212471fcb93fb42caa6f2e382c53b664520781062d7fb0921447350a22d37c1 medium confidence metastasis sample_accession: GSM984361 sample_title: 602_N source_name: Adjacent normal tissue characteristics: age (years): 44; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984362 Runtime Siftome inference GEO:sample:GSM984362:6d202ec18f6a582fa3ad57ae430b74a9ccb157297a743ac3a4d220661b7a88dc medium confidence metastasis sample_accession: GSM984362 sample_title: 673_N source_name: Adjacent normal tissue characteristics: age (years): 61; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984363 Runtime Siftome inference GEO:sample:GSM984363:6f78369aad0b9db73e322104cb8244a80fc3b8ca614d82093079b89c5d1f1f5f medium confidence metastasis sample_accession: GSM984363 sample_title: 677_N source_name: Adjacent normal tissue characteristics: age (years): 65; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984364 Runtime Siftome inference GEO:sample:GSM984364:99994ec20d3772b0735716ed83197fedb304a3b57490fb30418704b682a0d0e5 medium confidence metastasis sample_accession: GSM984364 sample_title: 881_N source_name: Adjacent normal tissue characteristics: age (years): 58; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984365 Runtime Siftome inference GEO:sample:GSM984365:d17ffd5cdf55e63025ac22c51c58026c06b6de51d80e1d30ad58e13b5b97a926 medium confidence metastasis sample_accession: GSM984365 sample_title: 887_N source_name: Adjacent normal tissue characteristics: age (years): 49; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984366 Runtime Siftome inference GEO:sample:GSM984366:17bcb8932a17ccae9a3f9d0e1ab0593eda090fd171e22652c3f9d415f1f050a3 medium confidence metastasis sample_accession: GSM984366 sample_title: 918_N source_name: Adjacent normal tissue characteristics: age (years): 38; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

tumor_type metastatic tumor sample GSM984367 Runtime Siftome inference GEO:sample:GSM984367:53fa08067de216ad28f8f111914da9603b62f99e86af9e31393de64d2bf5190d medium confidence metastasis sample_accession: GSM984367 sample_title: 922_N source_name: Adjacent normal tissue characteristics: age (years): 63; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; l... controlled vocabulary controlled vocabulary tumor type match: metastasis

Sample Group Preview

Possible case samples

Samples currently treated as the comparison case group.

24

GSM984330 291_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2
GSM984331 357_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1
GSM984332 417_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8
GSM984333 452_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 54; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.6
GSM984334 477_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 27; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.5
GSM984335 507_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 54; Stage: IIA; grade: 3; tumor size: 1; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 6.4
GSM984336 545_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 55; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.2
GSM984337 557_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 60; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.1
GSM984338 574_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 57; Stage: IIA; grade: 2; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.0
GSM984339 582_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 83; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 3.5
GSM984340 593_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 55; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.9
GSM984341 602_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 44; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.9
GSM984342 619_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 37; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 1.8
GSM984343 621_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 62; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.8
GSM984344 673_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 61; Stage: IIA; grade: 2; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 0.7
GSM984345 677_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 65; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 5.5
GSM984346 881_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 58; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 4.7
GSM984347 887_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 49; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.6
GSM984348 893_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 55; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.5
GSM984349 894_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 54; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.6
GSM984350 917_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 51; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5
GSM984351 918_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 38; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5
GSM984352 922_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 63; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5
GSM984353 941_T tumor sample Case marker detected. Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 52; Stage: IIA; grade: 3; tumor size: 1; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 4.4

Possible control samples

Samples currently treated as controls or baseline.

14

GSM984354 291_N normal tissue Control marker detected. Adjacent normal tissue age (years): 85; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984355 357_N normal tissue Control marker detected. Adjacent normal tissue age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984356 477_N normal tissue Control marker detected. Adjacent normal tissue age (years): 27; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984357 507_N normal tissue Control marker detected. Adjacent normal tissue age (years): 54; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984358 557_N normal tissue Control marker detected. Adjacent normal tissue age (years): 60; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984359 574_N normal tissue Control marker detected. Adjacent normal tissue age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984360 582_N normal tissue Control marker detected. Adjacent normal tissue age (years): 83; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984361 602_N normal tissue Control marker detected. Adjacent normal tissue age (years): 44; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984362 673_N normal tissue Control marker detected. Adjacent normal tissue age (years): 61; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984363 677_N normal tissue Control marker detected. Adjacent normal tissue age (years): 65; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984364 881_N normal tissue Control marker detected. Adjacent normal tissue age (years): 58; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984365 887_N normal tissue Control marker detected. Adjacent normal tissue age (years): 49; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984366 918_N normal tissue Control marker detected. Adjacent normal tissue age (years): 38; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984367 922_N normal tissue Control marker detected. Adjacent normal tissue age (years): 63; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

Unassigned samples

Samples with no explicit case or control marker.

0

No samples

Excluded samples

Samples excluded from grouping by hard exclusion rules.

0

No samples

Ambiguous samples

Samples that need manual review before trusting grouping.

0

No samples

Metadata Quality Components

Persisted metadata quality

100 pts

Clarity: 100%
Weight: 100 pts

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions. Group clarity: Rule-based grouping found both case and control samples. Disease clarity: Disease or condition metadata normalized. Tissue clarity: Tissue metadata normalized. Treatment clarity: No unclear treatment split detected in the sample metadata. Replicate clarity: No pooled sample or technical replicate flags detected. Data availability clarity: Dataset-level processed or raw data availability is explicit.

Detected Sample Groups

tumor sample

24 samples

GSM984330 291_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 85; Stage: IIIA; grade: 3; tumor size: 3; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.2
GSM984331 357_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 57; Stage: IIIC; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 7.1
GSM984332 417_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 33; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.8
GSM984333 452_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 54; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.6
GSM984334 477_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 27; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.5
GSM984335 507_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 54; Stage: IIA; grade: 3; tumor size: 1; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 6.4
GSM984336 545_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 55; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.2
GSM984337 557_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 60; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.1
GSM984338 574_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 57; Stage: IIA; grade: 2; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 6.0
GSM984339 582_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 83; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 3.5
GSM984340 593_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 55; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.9
GSM984341 602_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 44; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.9
GSM984342 619_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 37; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 1.8
GSM984343 621_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 62; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 5.8
GSM984344 673_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 61; Stage: IIA; grade: 2; tumor size: 2; recurrence: 0; lymph node metastasis: 1; recurrence-free time (years): 0.7
GSM984345 677_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 65; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 5.5
GSM984346 881_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 58; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 4.7
GSM984347 887_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 49; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.6
GSM984348 893_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 55; Stage: IIB; grade: 3; tumor size: 2; recurrence: 1; lymph node metastasis: 1; recurrence-free time (years): 1.5
GSM984349 894_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 54; Stage: I; grade: 2; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.6
GSM984350 917_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 51; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5
GSM984351 918_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 38; Stage: IIA; grade: 3; tumor size: 2; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5
GSM984352 922_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 63; Stage: I; grade: 3; tumor size: 1; recurrence: 0; lymph node metastasis: 0; recurrence-free time (years): 4.5
GSM984353 941_T Triple-negative breast cancer (Invasive ductal carcinoma) age (years): 52; Stage: IIA; grade: 3; tumor size: 1; recurrence: 1; lymph node metastasis: 0; recurrence-free time (years): 4.4

normal tissue

14 samples

GSM984354 291_N Adjacent normal tissue age (years): 85; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984355 357_N Adjacent normal tissue age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984356 477_N Adjacent normal tissue age (years): 27; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984357 507_N Adjacent normal tissue age (years): 54; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984358 557_N Adjacent normal tissue age (years): 60; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984359 574_N Adjacent normal tissue age (years): 57; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984360 582_N Adjacent normal tissue age (years): 83; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984361 602_N Adjacent normal tissue age (years): 44; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984362 673_N Adjacent normal tissue age (years): 61; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984363 677_N Adjacent normal tissue age (years): 65; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984364 881_N Adjacent normal tissue age (years): 58; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984365 887_N Adjacent normal tissue age (years): 49; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984366 918_N Adjacent normal tissue age (years): 38; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A
GSM984367 922_N Adjacent normal tissue age (years): 63; Stage: N/A; grade: N/A; tumor size: N/A; recurrence: N/A; lymph node metastasis: N/A; recurrence-free time (years): N/A

Score Breakdown

100%

relevance

Disease or condition metadata normalized.
Organism normalized.
Assay type normalized.
Tissue metadata normalized.

0%

comparison suitability

Tumor and normal sample groups detected.
No excluded sample type flags detected.
Matched tumor/normal design boosted for colorectal tumor-vs-normal tissue triage.
Patient tissue or biopsy specimens boosted for tissue comparison triage.
Non-colorectal cancer context downgraded for colorectal tumor-vs-normal tissue ranking.

100%

metadata quality

Sample source clarity: All samples have source metadata and clear GSE/GSM accessions.
Group clarity: Rule-based grouping found both case and control samples.
Disease clarity: Disease or condition metadata normalized.
Tissue clarity: Tissue metadata normalized.
Treatment clarity: No unclear treatment split detected in the sample metadata.
Replicate clarity: No pooled sample or technical replicate flags detected.
Data availability clarity: Dataset-level processed or raw data availability is explicit.

100%

data availability

Processed data available.
Raw data available.

34%

overall

Weighted score: 30% relevance, 30% comparison suitability, 25% metadata quality, 15% data availability.
Overall score capped because comparison suitability is weak for the selected search intent.
Overall score capped because tumor/normal grouping is from a non-colorectal cancer context.

Sample Links

38 samples

Review Audit Trail

0 decisions

No review decisions have been stored for this dataset.